EnhancerDB
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  3. vista3876[chr1:172106187-172106635]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3876[chr1:172106187-172106635]
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Tissue distribution of vista3876
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Transcription factor that possibly regulate vista3876[chr1:172106187-172106635]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172106168 172106189 IRF1 JASPAR yes 33110330
chr1 172106168 172106189 IRF1 JASPAR yes 118398247
chr1 172106220 172106231 NFE2L2 JASPAR yes 33110332
chr1 172106220 172106231 NFE2L2 JASPAR yes 118398248
chr1 172106222 172106240 ESR2 JASPAR yes 33110333
chr1 172106222 172106240 ESR2 JASPAR yes 118398249
chr1 172106225 172106229 ESR1 TRANSFAC yes 33110334
chr1 172106225 172106229 ESR1 TRANSFAC yes 118398250
chr1 172106228 172106243 JUND JASPAR yes 33110335
chr1 172106228 172106243 JUND JASPAR yes 118398251
chr1 172106241 172106253 PKNOX1 JASPAR yes 33110336
chr1 172106241 172106253 PKNOX2 JASPAR yes 33110337
chr1 172106241 172106253 TGIF1 JASPAR yes 33110338
chr1 172106241 172106253 TGIF2 JASPAR yes 33110339
chr1 172106241 172106253 PKNOX1 JASPAR yes 118398252
chr1 172106241 172106253 PKNOX2 JASPAR yes 118398253
chr1 172106241 172106253 TGIF1 JASPAR yes 118398254
chr1 172106241 172106253 TGIF2 JASPAR yes 118398255
chr1 172106246 172106254 MEIS2 JASPAR yes 33110340
chr1 172106246 172106254 MEIS3 JASPAR yes 33110341
chr1 172106246 172106254 MEIS2 JASPAR yes 118398256
chr1 172106246 172106254 MEIS3 JASPAR yes 118398257
chr1 172106247 172106251 NFE TRANSFAC yes 33110342
chr1 172106247 172106251 NFE TRANSFAC yes 118398258
chr1 172106247 172106254 MEIS1 JASPAR yes 33110343
chr1 172106247 172106254 MEIS1 JASPAR yes 118398259
chr1 172106275 172106279 H4TF2 TRANSFAC yes 33110344
chr1 172106275 172106279 H4TF2 TRANSFAC yes 118398260
chr1 172106316 172106320 YY1 TRANSFAC yes 33110345
chr1 172106316 172106320 YY1 TRANSFAC yes 118398261
chr1 172106319 172106332 SCRT2 JASPAR yes 33110346
chr1 172106319 172106332 SCRT2 JASPAR yes 118398262
chr1 172106319 172106334 SCRT1 JASPAR yes 33110347
chr1 172106319 172106334 ZIC3 JASPAR yes 33110348
chr1 172106319 172106334 SCRT1 JASPAR yes 118398263
chr1 172106319 172106334 ZIC3 JASPAR yes 118398264
chr1 172106323 172106332 SNAI2 JASPAR yes 33110349
chr1 172106323 172106332 SNAI2 JASPAR yes 118398265
chr1 172106323 172106333 FIGLA JASPAR yes 33110350
chr1 172106323 172106333 MSC JASPAR yes 33110351
chr1 172106323 172106333 MYF6 JASPAR yes 33110352
chr1 172106323 172106333 TCF3 JASPAR yes 33110353
chr1 172106323 172106333 FIGLA JASPAR yes 118398266
chr1 172106323 172106333 MSC JASPAR yes 118398267
chr1 172106323 172106333 MYF6 JASPAR yes 118398268
chr1 172106323 172106333 TCF3 JASPAR yes 118398269
chr1 172106339 172106343 YY1 TRANSFAC yes 33110354
chr1 172106339 172106343 YY1 TRANSFAC yes 118398270
chr1 172106346 172106351 NFY TRANSFAC yes 33110355
chr1 172106346 172106351 NFY TRANSFAC yes 118398271
chr1 172106372 172106383 JUND JASPAR yes 33110356
chr1 172106372 172106383 JUND JASPAR yes 118398272
chr1 172106374 172106380 JUN TRANSFAC yes 33110357
chr1 172106374 172106380 JUN TRANSFAC yes 118398273
chr1 172106391 172106401 GABPA JASPAR yes 33110358
chr1 172106391 172106401 GABPA JASPAR yes 118398274
chr1 172106391 172106404 ELF1 JASPAR yes 33110359
chr1 172106391 172106404 ELF1 JASPAR yes 118398275
chr1 172106391 172106405 SPI1 JASPAR yes 33110360
chr1 172106391 172106405 SPIC JASPAR yes 33110361
chr1 172106391 172106405 SPI1 JASPAR yes 118398276
chr1 172106391 172106405 SPIC JASPAR yes 118398277
chr1 172106394 172106409 FOXA1 JASPAR yes 33110362
chr1 172106394 172106409 FOXA1 JASPAR yes 118398278
chr1 172106395 172106407 FOXI1 JASPAR yes 33110363
chr1 172106395 172106407 FOXI1 JASPAR yes 118398279
chr1 172106395 172106410 FOXP1 JASPAR yes 33110364
chr1 172106395 172106410 FOXP1 JASPAR yes 118398280
chr1 172106396 172106407 FOXP2 JASPAR yes 33110365
chr1 172106396 172106407 FOXP2 JASPAR yes 118398281
chr1 172106398 172106409 FOXA1 JASPAR yes 33110366
chr1 172106398 172106409 FOXA1 JASPAR yes 118398282
chr1 172106411 172106415 YY1 TRANSFAC yes 33110367
chr1 172106411 172106415 YY1 TRANSFAC yes 118398283
chr1 172106418 172106425 NKX3-1 JASPAR yes 33110368
chr1 172106418 172106425 NKX3-1 JASPAR yes 118398284
chr1 172106423 172106432 SRY JASPAR yes 33110369
chr1 172106423 172106432 SRY JASPAR yes 118398285
chr1 172106437 172106441 YY1 TRANSFAC yes 33110370
chr1 172106437 172106441 YY1 TRANSFAC yes 118398286
chr1 172106455 172106470 MEF2A JASPAR yes 33110371
chr1 172106455 172106470 MEF2A JASPAR yes 118398287
chr1 172106456 172106471 MEF2C JASPAR yes 33110372
chr1 172106456 172106471 MEF2C JASPAR yes 118398288
chr1 172106459 172106463 YY1 TRANSFAC yes 33110373
chr1 172106459 172106463 YY1 TRANSFAC yes 118398289
chr1 172106486 172106497 DMRT3 JASPAR yes 33110374
chr1 172106486 172106497 DMRT3 JASPAR yes 118398290
chr1 172106489 172106494 GATA1 TRANSFAC yes 33110375
chr1 172106489 172106494 GATA1 TRANSFAC yes 118398291
chr1 172106522 172106536 TLX1 JASPAR yes 33110376
chr1 172106522 172106536 TLX1 JASPAR yes 118398292
chr1 172106527 172106538 FOXB1 JASPAR yes 33110377
chr1 172106527 172106538 FOXB1 JASPAR yes 118398293
chr1 172106545 172106554 SRY JASPAR yes 33110378
chr1 172106545 172106554 SRY JASPAR yes 118398294
chr1 172106566 172106569 MYB TRANSFAC yes 33110379
chr1 172106566 172106569 MYB TRANSFAC yes 118398295
chr1 172106572 172106583 PROP1 JASPAR yes 33110380
chr1 172106572 172106583 PROP1 JASPAR yes 118398296
chr1 172106578 172106582 YY1 TRANSFAC yes 33110381
chr1 172106578 172106582 YY1 TRANSFAC yes 118398297
chr1 172106583 172106597 TCF7L2 JASPAR yes 33110382
chr1 172106583 172106597 TCF7L2 JASPAR yes 118398298
chr1 172106586 172106592 LEF1 TRANSFAC yes 33110383
chr1 172106586 172106592 SOX10 JASPAR yes 33110384
chr1 172106586 172106592 LEF1 TRANSFAC yes 118398299
chr1 172106586 172106592 SOX10 JASPAR yes 118398300
chr1 172106601 172106613 PBX1 JASPAR yes 33110385
chr1 172106601 172106613 PBX1 JASPAR yes 118398301
chr1 172106615 172106625 ALX3 JASPAR yes 33110386
chr1 172106615 172106625 GSX2 JASPAR yes 33110387
chr1 172106615 172106625 MIXL1 JASPAR yes 33110388
chr1 172106615 172106625 MNX1 JASPAR yes 33110389
chr1 172106615 172106625 ALX3 JASPAR yes 118398302
chr1 172106615 172106625 GSX2 JASPAR yes 118398303
chr1 172106615 172106625 MIXL1 JASPAR yes 118398304
chr1 172106615 172106625 MNX1 JASPAR yes 118398305
chr1 172106616 172106624 ISX JASPAR yes 33110390
chr1 172106616 172106624 LMX1A JASPAR yes 33110391
chr1 172106616 172106624 LMX1B JASPAR yes 33110392
chr1 172106616 172106624 NKX6-1 JASPAR yes 33110393
chr1 172106616 172106624 NKX6-2 JASPAR yes 33110394
chr1 172106616 172106624 PRRX1 JASPAR yes 33110395
chr1 172106616 172106624 RAX2 JASPAR yes 33110396
chr1 172106616 172106624 SHOX JASPAR yes 33110397
chr1 172106616 172106624 UNCX JASPAR yes 33110398
chr1 172106616 172106624 VAX1 JASPAR yes 33110399
chr1 172106616 172106624 ISX JASPAR yes 118398306
chr1 172106616 172106624 LMX1A JASPAR yes 118398307
chr1 172106616 172106624 LMX1B JASPAR yes 118398308
chr1 172106616 172106624 NKX6-1 JASPAR yes 118398309
chr1 172106616 172106624 NKX6-2 JASPAR yes 118398310
chr1 172106616 172106624 PRRX1 JASPAR yes 118398311
chr1 172106616 172106624 RAX2 JASPAR yes 118398312
chr1 172106616 172106624 SHOX JASPAR yes 118398313
chr1 172106616 172106624 UNCX JASPAR yes 118398314
chr1 172106616 172106624 VAX1 JASPAR yes 118398315
chr1 172106630 172106634 TEAD2 TRANSFAC yes 33110400
chr1 172106630 172106634 TEAD2 TRANSFAC yes 118398316
SNP sites on vista3876[chr1:172106187-172106635]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172106197 rs2819531 C T no 727119
chr1 172106406 rs545184438 AT A
FOXA1 FOXI1 FOXP1 FOXP2
727120
chr1 172106411 rs192763150 A C
YY1
727121
chr1 172106483 rs550043493 G A no 727122
Genes possibly regulated by vista3876[chr1:172106187-172106635]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista3876[chr1:172106187-172106635]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results