Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region



Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172305839 172305845 TBP TRANSFAC yes 118398457
chr1 172305839 172305854 FOXP1 JASPAR yes 118398458
chr1 172305840 172305855 FOXP1 JASPAR yes 118398459
chr1 172305841 172305856 FOXP1 JASPAR yes 118398460
chr1 172305841 172305862 IRF1 JASPAR yes 118398461
chr1 172305842 172305857 FOXP1 JASPAR yes 118398462
chr1 172305845 172305860 STAT2 JASPAR yes 118398463
chr1 172305868 172305874 GATA3 JASPAR yes 118398464
chr1 172305881 172305884 MYB TRANSFAC yes 118398465
chr1 172305894 172305907 SCRT2 JASPAR yes 118398466
chr1 172305895 172305910 FOXA1 JASPAR yes 118398467
chr1 172305904 172305916 MEF2D JASPAR yes 118398468
chr1 172305906 172305916 ALX3 JASPAR yes 118398469
chr1 172305906 172305916 EMX2 JASPAR yes 118398470
chr1 172305906 172305916 GSX1 JASPAR yes 118398471
chr1 172305906 172305916 GSX2 JASPAR yes 118398472
chr1 172305906 172305916 HOXB2 JASPAR yes 118398473
chr1 172305906 172305916 HOXB3 JASPAR yes 118398474
chr1 172305906 172305916 LBX2 JASPAR yes 118398475
chr1 172305906 172305916 LHX2 JASPAR yes 118398476
chr1 172305906 172305916 MIXL1 JASPAR yes 118398477
chr1 172305906 172305916 MNX1 JASPAR yes 118398478
chr1 172305906 172305916 NOTO JASPAR yes 118398479
chr1 172305907 172305915 EN1 JASPAR yes 118398480
chr1 172305907 172305915 ISX JASPAR yes 118398481
chr1 172305907 172305915 LBX1 JASPAR yes 118398482
chr1 172305907 172305915 LHX9 JASPAR yes 118398483
chr1 172305907 172305915 PAX4 JASPAR yes 118398484
chr1 172305907 172305915 PDX1 JASPAR yes 118398485
chr1 172305907 172305915 PRRX1 JASPAR yes 118398486
chr1 172305907 172305915 RAX2 JASPAR yes 118398487
chr1 172305907 172305915 SHOX JASPAR yes 118398488
chr1 172305907 172305915 UNCX JASPAR yes 118398489
chr1 172305907 172305915 VAX1 JASPAR yes 118398490
chr1 172305907 172305915 VAX2 JASPAR yes 118398491
chr1 172305907 172305915 VSX1 JASPAR yes 118398492
chr1 172305907 172305915 VSX2 JASPAR yes 118398493
chr1 172305917 172305922 GATA2 JASPAR yes 118398494
chr1 172305940 172305953 SMAD2 JASPAR yes 118398495
chr1 172305974 172305984 HMBOX1 JASPAR yes 118398496
chr1 172305976 172305979 MYB TRANSFAC yes 118398497

chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172305840 rs71717500 TA T
728130
chr1 172305850 rs191622710 A T 728131
chr1 172305874 rs75093891 G A
728132
chr1 172305875 rs184568195 T C no 728133
chr1 172305897 rs140200599 AC A
728134
chr1 172305978 rs538806550 A C
728135

Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172389828 172437971 + C1orf105 ENSG00000180999.6 172389828 0.96 0.91 1572 16163


Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More

No results