EnhancerDB
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  3. vista3885[chr1:172327558-172328156]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3885[chr1:172327558-172328156]
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Tissue distribution of vista3885
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Transcription factor that possibly regulate vista3885[chr1:172327558-172328156]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172327485 172328274 IKZF1 UCSC Txn Factor no Conserved 107845592
chr1 172327501 172327912 RUNX3 UCSC Txn Factor no Conserved 107845593
chr1 172327520 172327964 NFIC UCSC Txn Factor no Conserved 107845596
chr1 172327940 172328653 GATA3 UCSC Txn Factor no Conserved 107845638
chr1 172327969 172328223 FOSL2 UCSC Txn Factor no Conserved 107845645
chr1 172327978 172328594 EP300 UCSC Txn Factor no Conserved 107845648
chr1 172328068 172328552 GATA2 UCSC Txn Factor no Conserved 107845664
chr1 172328088 172328604 TFAP2C UCSC Txn Factor no Conserved 107845665
chr1 172327559 172327570 NFKB1 JASPAR yes 33125726
chr1 172327559 172327570 NFKB1 JASPAR yes 118398613
chr1 172327560 172327570 NFKB1 JASPAR yes 33125727
chr1 172327560 172327570 RELA JASPAR yes 33125728
chr1 172327560 172327570 REL JASPAR yes 33125729
chr1 172327560 172327570 NFKB1 JASPAR yes 118398614
chr1 172327560 172327570 RELA JASPAR yes 118398615
chr1 172327560 172327570 REL JASPAR yes 118398616
chr1 172327560 172327571 NFKB1 JASPAR yes 33125730
chr1 172327560 172327571 NFKB1 JASPAR yes 118398617
chr1 172327580 172327583 MYB TRANSFAC yes 33125731
chr1 172327580 172327583 MYB TRANSFAC yes 118398618
chr1 172327597 172327612 RFX5 JASPAR yes 33125732
chr1 172327597 172327612 RFX5 JASPAR yes 118398619
chr1 172327600 172327609 NFIX JASPAR yes 33125733
chr1 172327600 172327609 NFIX JASPAR yes 118398620
chr1 172327600 172327610 NFIA JASPAR yes 33125734
chr1 172327600 172327610 NFIA JASPAR yes 118398621
chr1 172327602 172327608 NFIC JASPAR yes 33125735
chr1 172327602 172327608 NFIC JASPAR yes 118398622
chr1 172327632 172327636 NFE TRANSFAC yes 33125736
chr1 172327632 172327636 NFE TRANSFAC yes 118398623
chr1 172327632 172327637 GATA1 TRANSFAC yes 33125737
chr1 172327632 172327637 GATA1 TRANSFAC yes 118398624
chr1 172327632 172327638 GATA3 JASPAR yes 33125738
chr1 172327632 172327638 GATA3 JASPAR yes 118398625
chr1 172327637 172327657 RREB1 JASPAR yes 33125739
chr1 172327637 172327657 RREB1 JASPAR yes 118398626
chr1 172327639 172327649 ERF JASPAR yes 33125740
chr1 172327639 172327649 ERG JASPAR yes 33125741
chr1 172327639 172327649 ETS1 JASPAR yes 33125742
chr1 172327639 172327649 ERF JASPAR yes 118398627
chr1 172327639 172327649 ERG JASPAR yes 118398628
chr1 172327639 172327649 ETS1 JASPAR yes 118398629
chr1 172327639 172327650 FLI1 JASPAR yes 33125743
chr1 172327639 172327650 FLI1 JASPAR yes 118398630
chr1 172327640 172327647 PEA3 TRANSFAC yes 33125744
chr1 172327640 172327647 PEA3 TRANSFAC yes 118398631
chr1 172327660 172327666 LEF1 TRANSFAC yes 33125745
chr1 172327660 172327666 SOX10 JASPAR yes 33125746
chr1 172327660 172327666 LEF1 TRANSFAC yes 118398632
chr1 172327660 172327666 SOX10 JASPAR yes 118398633
chr1 172327672 172327687 MEF2A JASPAR yes 33125747
chr1 172327672 172327687 MEF2A JASPAR yes 118398634
chr1 172327673 172327688 MEF2C JASPAR yes 33125748
chr1 172327673 172327688 MEF2C JASPAR yes 118398635
chr1 172327674 172327686 MEF2A JASPAR yes 33125749
chr1 172327674 172327686 MEF2B JASPAR yes 33125750
chr1 172327674 172327686 MEF2D JASPAR yes 33125751
chr1 172327674 172327686 MEF2A JASPAR yes 118398636
chr1 172327674 172327686 MEF2B JASPAR yes 118398637
chr1 172327674 172327686 MEF2D JASPAR yes 118398638
chr1 172327675 172327685 MEF2A JASPAR yes 33125752
chr1 172327675 172327685 MEF2A JASPAR yes 118398639
chr1 172327676 172327680 YY1 TRANSFAC yes 33125753
chr1 172327676 172327680 YY1 TRANSFAC yes 118398640
chr1 172327677 172327691 IRF7 JASPAR yes 33125754
chr1 172327677 172327691 IRF7 JASPAR yes 118398641
chr1 172327679 172327694 MEF2C JASPAR yes 33125755
chr1 172327679 172327694 MEF2C JASPAR yes 118398642
chr1 172327682 172327686 YY1 TRANSFAC yes 33125756
chr1 172327682 172327686 YY1 TRANSFAC yes 118398643
chr1 172327715 172327726 E2F6 JASPAR yes 33125757
chr1 172327715 172327726 E2F6 JASPAR yes 118398644
chr1 172327718 172327728 SP1 JASPAR yes 33125758
chr1 172327718 172327728 SP1 JASPAR yes 118398645
chr1 172327720 172327730 ZNF740 JASPAR yes 33125759
chr1 172327720 172327730 ZNF740 JASPAR yes 118398646
chr1 172327731 172327752 IRF1 JASPAR yes 33125760
chr1 172327731 172327752 IRF1 JASPAR yes 118398647
chr1 172327733 172327748 IRF9 JASPAR yes 33125761
chr1 172327733 172327748 IRF9 JASPAR yes 118398648
chr1 172327841 172327852 BATF JASPAR yes 33125762
chr1 172327841 172327852 BATF JASPAR yes 118398649
chr1 172327885 172327893 GATA3 JASPAR yes 33125763
chr1 172327885 172327893 GATA3 JASPAR yes 118398650
chr1 172327906 172327910 TEAD2 TRANSFAC yes 33125764
chr1 172327906 172327910 TEAD2 TRANSFAC yes 118398651
chr1 172327906 172327911 TBP TRANSFAC yes 33125765
chr1 172327906 172327911 TBP TRANSFAC yes 118398652
chr1 172327907 172327922 PRDM1 JASPAR yes 33125766
chr1 172327907 172327922 PRDM1 JASPAR yes 118398653
chr1 172327932 172327947 FOXP1 JASPAR yes 33125767
chr1 172327932 172327947 FOXP1 JASPAR yes 118398654
chr1 172327938 172327945 NKX3-1 JASPAR yes 33125768
chr1 172327938 172327945 NKX3-1 JASPAR yes 118398655
chr1 172327945 172327956 CDX2 JASPAR yes 33125769
chr1 172327945 172327956 CDX2 JASPAR yes 118398656
chr1 172327946 172327957 HOXA10 JASPAR yes 33125770
chr1 172327946 172327957 HOXA10 JASPAR yes 118398657
chr1 172327947 172327956 CDX1 JASPAR yes 33125771
chr1 172327947 172327956 CDX1 JASPAR yes 118398658
chr1 172327947 172327957 HOXA13 JASPAR yes 33125772
chr1 172327947 172327957 HOXB13 JASPAR yes 33125773
chr1 172327947 172327957 HOXD13 JASPAR yes 33125774
chr1 172327947 172327957 HOXA13 JASPAR yes 118398659
chr1 172327947 172327957 HOXB13 JASPAR yes 118398660
chr1 172327947 172327957 HOXD13 JASPAR yes 118398661
chr1 172327965 172327975 NFATC3 JASPAR yes 33125775
chr1 172327965 172327975 NFATC3 JASPAR yes 118398662
chr1 172327965 172327977 POU2F1 JASPAR yes 33125776
chr1 172327965 172327977 POU2F1 JASPAR yes 118398663
chr1 172327975 172327987 HNF1B JASPAR yes 33125777
chr1 172327975 172327987 HNF1B JASPAR yes 118398664
chr1 172327979 172327983 YY1 TRANSFAC yes 33125778
chr1 172327979 172327983 YY1 TRANSFAC yes 118398665
chr1 172327987 172328000 ELF3 JASPAR yes 33125779
chr1 172327987 172328000 ELF3 JASPAR yes 118398666
chr1 172327988 172328000 ELF4 JASPAR yes 33125780
chr1 172327988 172328000 ELF4 JASPAR yes 118398667
chr1 172327990 172327996 ETS1 JASPAR yes 33125781
chr1 172327990 172327996 ETS1 JASPAR yes 118398668
chr1 172327990 172328000 ELK1 JASPAR yes 33125782
chr1 172327990 172328000 ELK1 JASPAR yes 118398669
chr1 172328001 172328014 ELF1 JASPAR yes 33125783
chr1 172328001 172328014 ELF1 JASPAR yes 118398670
chr1 172328001 172328015 SPI1 JASPAR yes 33125784
chr1 172328001 172328015 SPI1 JASPAR yes 118398671
chr1 172328002 172328010 EHF JASPAR yes 33125785
chr1 172328002 172328010 EHF JASPAR yes 118398672
chr1 172328014 172328017 MYB TRANSFAC yes 33125786
chr1 172328014 172328017 MYB TRANSFAC yes 118398673
chr1 172328028 172328039 CEBPA JASPAR yes 33125787
chr1 172328028 172328039 CEBPA JASPAR yes 118398674
chr1 172328029 172328040 CEBPB JASPAR yes 33125788
chr1 172328029 172328040 CEBPB JASPAR yes 118398675
chr1 172328034 172328049 FOXP1 JASPAR yes 33125789
chr1 172328034 172328049 FOXP1 JASPAR yes 118398676
chr1 172328036 172328041 ETS2 TRANSFAC yes 33125790
chr1 172328036 172328041 ETS2 TRANSFAC yes 118398677
chr1 172328037 172328052 STAT2 JASPAR yes 33125791
chr1 172328037 172328052 STAT2 JASPAR yes 118398678
chr1 172328045 172328060 RUNX2 JASPAR yes 33125792
chr1 172328045 172328060 RUNX2 JASPAR yes 118398679
chr1 172328071 172328076 H4TF1 TRANSFAC yes 33125793
chr1 172328071 172328076 H4TF1 TRANSFAC yes 118398680
chr1 172328076 172328091 RUNX2 JASPAR yes 33125794
chr1 172328076 172328091 RUNX2 JASPAR yes 118398681
chr1 172328078 172328088 MAX JASPAR yes 33125795
chr1 172328078 172328088 MAX JASPAR yes 118398682
chr1 172328078 172328089 USF1 JASPAR yes 33125796
chr1 172328078 172328089 USF2 JASPAR yes 33125797
chr1 172328078 172328089 USF1 JASPAR yes 118398683
chr1 172328078 172328089 USF2 JASPAR yes 118398684
chr1 172328079 172328089 TFE3 JASPAR yes 33125798
chr1 172328079 172328089 TFEB JASPAR yes 33125799
chr1 172328079 172328089 TFEC JASPAR yes 33125800
chr1 172328079 172328089 TFE3 JASPAR yes 118398685
chr1 172328079 172328089 TFEB JASPAR yes 118398686
chr1 172328079 172328089 TFEC JASPAR yes 118398687
chr1 172328079 172328090 USF1 JASPAR yes 33125801
chr1 172328079 172328090 USF1 JASPAR yes 118398688
chr1 172328079 172328093 JUN JASPAR yes 33125802
chr1 172328079 172328093 JUN JASPAR yes 118398689
chr1 172328082 172328093 FOSL2 JASPAR yes 33125803
chr1 172328082 172328093 JUNB JASPAR yes 33125804
chr1 172328082 172328093 FOSL2 JASPAR yes 118398690
chr1 172328082 172328093 JUNB JASPAR yes 118398691
chr1 172328083 172328094 FOS JASPAR yes 33125805
chr1 172328083 172328094 FOSL1 JASPAR yes 33125806
chr1 172328083 172328094 JUND JASPAR yes 33125807
chr1 172328083 172328094 NFE2 JASPAR yes 33125808
chr1 172328083 172328094 FOS JASPAR yes 118398692
chr1 172328083 172328094 FOSL1 JASPAR yes 118398693
chr1 172328083 172328094 JUND JASPAR yes 118398694
chr1 172328083 172328094 NFE2 JASPAR yes 118398695
chr1 172328084 172328093 JDP2 JASPAR yes 33125809
chr1 172328084 172328093 JDP2 JASPAR yes 118398696
chr1 172328084 172328095 FOSL2 JASPAR yes 33125810
chr1 172328084 172328095 JUNB JASPAR yes 33125811
chr1 172328084 172328095 FOSL2 JASPAR yes 118398697
chr1 172328084 172328095 JUNB JASPAR yes 118398698
chr1 172328084 172328098 JUN JASPAR yes 33125812
chr1 172328084 172328098 JUN JASPAR yes 118398699
chr1 172328085 172328096 BATF JASPAR yes 33125813
chr1 172328085 172328096 BATF JASPAR yes 118398700
chr1 172328086 172328096 POU6F2 JASPAR yes 33125814
chr1 172328086 172328096 POU6F2 JASPAR yes 118398701
chr1 172328090 172328094 YY1 TRANSFAC yes 33125815
chr1 172328090 172328094 YY1 TRANSFAC yes 118398702
chr1 172328105 172328120 HSF1 JASPAR yes 33125816
chr1 172328105 172328120 HSF1 JASPAR yes 118398703
chr1 172328116 172328131 FOXP1 JASPAR yes 33125817
chr1 172328116 172328131 FOXP1 JASPAR yes 118398704
chr1 172328117 172328128 FOXP2 JASPAR yes 33125818
chr1 172328117 172328128 FOXP2 JASPAR yes 118398705
chr1 172328119 172328130 FOXA1 JASPAR yes 33125819
chr1 172328119 172328130 FOXA1 JASPAR yes 118398706
SNP sites on vista3885[chr1:172327558-172328156]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172327848 rs112907030 A G
BATF IKZF1 NFIC RUNX3
728287
chr1 172328040 rs397802320 G GA
CEBPB EP300 ETS2 FOSL2 FOXP1 GATA3 IKZF1 STAT2
728288
chr1 172328040 rs5778731 G GA
CEBPB EP300 ETS2 FOSL2 FOXP1 GATA3 IKZF1 STAT2
728289
chr1 172328040 rs869089166 G GA
CEBPB EP300 ETS2 FOSL2 FOXP1 GATA3 IKZF1 STAT2
728290
Genes possibly regulated by vista3885[chr1:172327558-172328156]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172339329 172413230 - PIGC ENSG00000135845.5 172413230 0.69 0.99 1571 14926
chr1 172389828 172437971 + C1orf105 ENSG00000180999.6 172389828 0.96 0.91 1572 38328
Expression level of Genes
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miRNAs possibly regulated by vista3885[chr1:172327558-172328156]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results