EnhancerDB
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  3. vista3886[chr1:172352690-172352912]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3886[chr1:172352690-172352912]
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Tissue distribution of vista3886
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Transcription factor that possibly regulate vista3886[chr1:172352690-172352912]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172352694 172352698 H1TF2 TRANSFAC yes 33126902
chr1 172352694 172352698 NFE TRANSFAC yes 33126903
chr1 172352694 172352698 SRF TRANSFAC yes 33126904
chr1 172352694 172352698 H1TF2 TRANSFAC yes 118398707
chr1 172352694 172352698 NFE TRANSFAC yes 118398708
chr1 172352694 172352698 SRF TRANSFAC yes 118398709
chr1 172352706 172352712 SOX10 JASPAR yes 33126905
chr1 172352706 172352712 SOX10 JASPAR yes 118398710
chr1 172352713 172352728 STAT1 JASPAR yes 33126906
chr1 172352713 172352728 STAT1 JASPAR yes 118398711
chr1 172352719 172352724 ETS2 TRANSFAC yes 33126907
chr1 172352719 172352724 ETS2 TRANSFAC yes 118398712
chr1 172352719 172352727 FEV JASPAR yes 33126908
chr1 172352719 172352727 FEV JASPAR yes 118398713
chr1 172352723 172352742 RFX2 JASPAR yes 33126909
chr1 172352723 172352742 RFX2 JASPAR yes 118398714
chr1 172352727 172352743 RFX2 JASPAR yes 33126910
chr1 172352727 172352743 RFX3 JASPAR yes 33126911
chr1 172352727 172352743 RFX4 JASPAR yes 33126912
chr1 172352727 172352743 RFX5 JASPAR yes 33126913
chr1 172352727 172352743 RFX2 JASPAR yes 118398715
chr1 172352727 172352743 RFX3 JASPAR yes 118398716
chr1 172352727 172352743 RFX4 JASPAR yes 118398717
chr1 172352727 172352743 RFX5 JASPAR yes 118398718
chr1 172352728 172352747 RFX2 JASPAR yes 33126914
chr1 172352728 172352747 RFX2 JASPAR yes 118398719
chr1 172352730 172352745 RFX5 JASPAR yes 33126915
chr1 172352730 172352745 RFX5 JASPAR yes 118398720
chr1 172352738 172352741 MYB TRANSFAC yes 33126916
chr1 172352738 172352741 MYB TRANSFAC yes 118398721
chr1 172352760 172352771 NFKB1 JASPAR yes 33126917
chr1 172352760 172352771 NFKB1 JASPAR yes 118398722
chr1 172352761 172352776 HSF1 JASPAR yes 33126918
chr1 172352761 172352776 HSF1 JASPAR yes 118398723
chr1 172352763 172352783 TP53 JASPAR yes 33126919
chr1 172352763 172352783 TP53 JASPAR yes 118398724
chr1 172352771 172352777 HiNF-A TRANSFAC yes 33126920
chr1 172352771 172352777 HiNF-A TRANSFAC yes 118398725
chr1 172352785 172352789 YY1 TRANSFAC yes 33126921
chr1 172352785 172352789 YY1 TRANSFAC yes 118398726
chr1 172352785 172352796 TBX20 JASPAR yes 33126922
chr1 172352785 172352796 TBX20 JASPAR yes 118398727
chr1 172352835 172352847 FOXI1 JASPAR yes 33126923
chr1 172352835 172352847 FOXI1 JASPAR yes 118398728
chr1 172352841 172352858 ZNF410 JASPAR yes 33126924
chr1 172352841 172352858 ZNF410 JASPAR yes 118398729
chr1 172352877 172352884 SPIB JASPAR yes 33126925
chr1 172352877 172352884 SPIB JASPAR yes 118398730
chr1 172352880 172352888 FOXO3 JASPAR yes 33126926
chr1 172352880 172352888 FOXO3 JASPAR yes 118398731
chr1 172352883 172352896 ZBTB18 JASPAR yes 33126927
chr1 172352883 172352896 ZBTB18 JASPAR yes 118398732
chr1 172352892 172352908 POU4F2 JASPAR yes 33126928
chr1 172352892 172352908 POU4F3 JASPAR yes 33126929
chr1 172352892 172352908 POU4F2 JASPAR yes 118398733
chr1 172352892 172352908 POU4F3 JASPAR yes 118398734
chr1 172352895 172352899 YY1 TRANSFAC yes 33126930
chr1 172352895 172352899 YY1 TRANSFAC yes 118398735
chr1 172352898 172352908 HOXC10 JASPAR yes 33126931
chr1 172352898 172352908 HOXD11 JASPAR yes 33126932
chr1 172352898 172352908 HOXC10 JASPAR yes 118398736
chr1 172352898 172352908 HOXD11 JASPAR yes 118398737
chr1 172352898 172352909 HOXA10 JASPAR yes 33126933
chr1 172352898 172352909 HOXC11 JASPAR yes 33126934
chr1 172352898 172352909 HOXC12 JASPAR yes 33126935
chr1 172352898 172352909 HOXD12 JASPAR yes 33126936
chr1 172352898 172352909 HOXA10 JASPAR yes 118398738
chr1 172352898 172352909 HOXC11 JASPAR yes 118398739
chr1 172352898 172352909 HOXC12 JASPAR yes 118398740
chr1 172352898 172352909 HOXD12 JASPAR yes 118398741
chr1 172352899 172352909 MEOX2 JASPAR yes 33126937
chr1 172352899 172352909 MNX1 JASPAR yes 33126938
chr1 172352899 172352909 MEOX2 JASPAR yes 118398742
chr1 172352899 172352909 MNX1 JASPAR yes 118398743
chr1 172352899 172352914 JUND JASPAR yes 33126939
chr1 172352899 172352914 JUND JASPAR yes 118398744
chr1 172352900 172352908 NKX6-1 JASPAR yes 33126940
chr1 172352900 172352908 NKX6-1 JASPAR yes 118398745
chr1 172352900 172352910 POU6F2 JASPAR yes 33126941
chr1 172352900 172352910 POU6F2 JASPAR yes 118398746
chr1 172352900 172352913 JUN JASPAR yes 33126942
chr1 172352900 172352913 JUN JASPAR yes 118398747
chr1 172352901 172352915 ATF7 JASPAR yes 33126943
chr1 172352901 172352915 ATF7 JASPAR yes 118398748
chr1 172352902 172352914 JDP2 JASPAR yes 33126944
chr1 172352902 172352914 JDP2 JASPAR yes 118398749
chr1 172352902 172352917 JUND JASPAR yes 33126945
chr1 172352902 172352917 JUND JASPAR yes 118398750
chr1 172352903 172352916 JUN JASPAR yes 33126946
chr1 172352903 172352916 JUN JASPAR yes 118398751
chr1 172352904 172352912 CREB1 JASPAR yes 33126947
chr1 172352904 172352912 CREB1 JASPAR yes 118398752
chr1 172352910 172352920 TEAD1 JASPAR yes 33126948
chr1 172352910 172352920 TEAD4 JASPAR yes 33126949
chr1 172352910 172352920 TEAD1 JASPAR yes 118398753
chr1 172352910 172352920 TEAD4 JASPAR yes 118398754
chr1 172352911 172352919 TEAD3 JASPAR yes 33126950
chr1 172352911 172352919 TEAD3 JASPAR yes 118398755
SNP sites on vista3886[chr1:172352690-172352912]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172352763 rs140557549 G A
HSF1 NFKB1 TP53
728370
chr1 172352797 rs190721911 G A no 728371
chr1 172352798 rs74126213 G A no 728372
Genes possibly regulated by vista3886[chr1:172352690-172352912]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172339329 172413230 - PIGC ENSG00000135845.5 172413230 0.69 0.99 1571 39682
chr1 172389828 172437971 + C1orf105 ENSG00000180999.6 172389828 0.96 0.91 1572 63084
Expression level of Genes
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miRNAs possibly regulated by vista3886[chr1:172352690-172352912]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results