EnhancerDB
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  3. vista3888[chr1:172418117-172418641]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3888[chr1:172418117-172418641]
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Tissue distribution of vista3888
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Transcription factor that possibly regulate vista3888[chr1:172418117-172418641]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172418155 172418420 TFAP2C UCSC Txn Factor no Conserved 107845722
chr1 172418303 172418511 FOSL2 UCSC Txn Factor no Conserved 107845734
chr1 172418165 172418186 ZNF263 JASPAR yes 118398835
chr1 172418168 172418189 ZNF263 JASPAR yes 118398836
chr1 172418175 172418190 PRDM1 JASPAR yes 118398837
chr1 172418189 172418204 JUND JASPAR yes 118398838
chr1 172418194 172418208 GATA2 JASPAR yes 118398839
chr1 172418196 172418204 GATA3 JASPAR yes 118398840
chr1 172418212 172418217 USF2 TRANSFAC yes 118398841
chr1 172418226 172418236 TEAD1 JASPAR yes 118398842
chr1 172418226 172418236 TEAD4 JASPAR yes 118398843
chr1 172418226 172418238 TEAD1 JASPAR yes 118398844
chr1 172418227 172418235 TEAD3 JASPAR yes 118398845
chr1 172418241 172418249 MEIS2 JASPAR yes 118398846
chr1 172418241 172418249 MEIS3 JASPAR yes 118398847
chr1 172418242 172418246 NFE TRANSFAC yes 118398848
chr1 172418254 172418269 TFAP2C JASPAR yes 118398849
chr1 172418255 172418266 TFAP2A JASPAR yes 118398850
chr1 172418255 172418266 TFAP2B JASPAR yes 118398851
chr1 172418255 172418266 TFAP2C JASPAR yes 118398852
chr1 172418343 172418356 SMAD2 JASPAR yes 118398853
chr1 172418348 172418359 FOXB1 JASPAR yes 118398854
chr1 172418354 172418364 NEUROG2 JASPAR yes 118398855
chr1 172418358 172418366 FOXL1 JASPAR yes 118398856
chr1 172418358 172418370 FOXC2 JASPAR yes 118398857
chr1 172418358 172418372 FOXF2 JASPAR yes 118398858
chr1 172418359 172418367 FOXD1 JASPAR yes 118398859
chr1 172418359 172418367 FOXG1 JASPAR yes 118398860
chr1 172418359 172418367 FOXO3 JASPAR yes 118398861
chr1 172418360 172418367 FOXD2 JASPAR yes 118398862
chr1 172418360 172418367 FOXI1 JASPAR yes 118398863
chr1 172418360 172418367 FOXL1 JASPAR yes 118398864
chr1 172418360 172418367 FOXO4 JASPAR yes 118398865
chr1 172418360 172418367 FOXO6 JASPAR yes 118398866
chr1 172418360 172418367 FOXP3 JASPAR yes 118398867
chr1 172418368 172418383 HNF4A JASPAR yes 118398868
chr1 172418369 172418384 HNF4G JASPAR yes 118398869
chr1 172418373 172418379 LEF1 TRANSFAC yes 118398870
chr1 172418373 172418379 SOX10 JASPAR yes 118398871
chr1 172418374 172418389 FOXA1 JASPAR yes 118398872
chr1 172418378 172418382 YY1 TRANSFAC yes 118398873
chr1 172418378 172418389 FOXA1 JASPAR yes 118398874
chr1 172418397 172418408 BATF JASPAR yes 118398875
chr1 172418399 172418413 JUN JASPAR yes 118398876
chr1 172418402 172418413 FOSL2 JASPAR yes 118398877
chr1 172418402 172418413 JUNB JASPAR yes 118398878
chr1 172418403 172418414 FOS JASPAR yes 118398879
chr1 172418403 172418414 FOSL1 JASPAR yes 118398880
chr1 172418403 172418414 JUND JASPAR yes 118398881
chr1 172418404 172418415 FOSL2 JASPAR yes 118398882
chr1 172418404 172418415 JUNB JASPAR yes 118398883
chr1 172418404 172418415 NFE2L2 JASPAR yes 118398884
chr1 172418404 172418418 JUN JASPAR yes 118398885
chr1 172418405 172418412 JUN TRANSFAC yes 118398886
chr1 172418427 172418438 NFE2L2 JASPAR yes 118398887
chr1 172418431 172418452 REST JASPAR yes 118398888
chr1 172418478 172418482 LFA1 TRANSFAC yes 118398889
chr1 172418484 172418494 NKX2-3 JASPAR yes 118398890
chr1 172418499 172418507 TBX15 JASPAR yes 118398891
chr1 172418500 172418505 SP1 TRANSFAC yes 118398892
chr1 172418502 172418517 HNF4G JASPAR yes 118398893
chr1 172418502 172418517 NR2C2 JASPAR yes 118398894
chr1 172418503 172418517 NR2F1 JASPAR yes 118398895
chr1 172418503 172418517 RXRB JASPAR yes 118398896
chr1 172418503 172418517 RXRG JASPAR yes 118398897
chr1 172418503 172418518 HNF4A JASPAR yes 118398898
chr1 172418527 172418531 LFA1 TRANSFAC yes 118398899
chr1 172418537 172418547 ETV6 JASPAR yes 118398900
chr1 172418547 172418561 JUN JASPAR yes 118398901
chr1 172418556 172418570 SPI1 JASPAR yes 118398902
chr1 172418556 172418570 SPIC JASPAR yes 118398903
chr1 172418557 172418570 ELF1 JASPAR yes 118398904
chr1 172418558 172418570 EHF JASPAR yes 118398905
chr1 172418558 172418570 ELF4 JASPAR yes 118398906
chr1 172418559 172418570 ELF5 JASPAR yes 118398907
chr1 172418559 172418570 ETV2 JASPAR yes 118398908
chr1 172418560 172418567 SPIB JASPAR yes 118398909
chr1 172418560 172418570 ETV6 JASPAR yes 118398910
chr1 172418560 172418570 GABPA JASPAR yes 118398911
chr1 172418560 172418571 ELK4 JASPAR yes 118398912
chr1 172418560 172418571 FLI1 JASPAR yes 118398913
chr1 172418561 172418569 EHF JASPAR yes 118398914
chr1 172418562 172418569 SPI1 JASPAR yes 118398915
chr1 172418596 172418604 FOXO3 JASPAR yes 118398916
chr1 172418600 172418609 NKX2-8 JASPAR yes 118398917
chr1 172418600 172418610 NKX2-3 JASPAR yes 118398918
chr1 172418606 172418617 E2F6 JASPAR yes 118398919
chr1 172418608 172418629 ZNF263 JASPAR yes 118398920
chr1 172418610 172418615 ETS2 TRANSFAC yes 118398921
chr1 172418611 172418632 ZNF263 JASPAR yes 118398922
chr1 172418614 172418635 ZNF263 JASPAR yes 118398923
chr1 172418626 172418632 PEA3 TRANSFAC yes 118398924
SNP sites on vista3888[chr1:172418117-172418641]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172418251 rs116124903 G A
TFAP2C
728611
chr1 172418268 rs2301455 C T
TFAP2C
728612
chr1 172418288 rs149610634 G A
TFAP2C
728613
chr1 172418466 rs116028430 C T
FOSL2
728614
chr1 172418467 rs77807464 G A
FOSL2
728615
Genes possibly regulated by vista3888[chr1:172418117-172418641]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172339329 172413230 - PIGC ENSG00000135845.5 172413230 0.69 0.99 1571 95113
chr1 172389828 172437971 + C1orf105 ENSG00000180999.6 172389828 0.96 0.91 1572 71711
chr1 172501489 172580971 + SUCO ENSG00000094975.9 172501489 0.73 0.99 1573 17152
Expression level of Genes
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miRNAs possibly regulated by vista3888[chr1:172418117-172418641]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results