EnhancerDB
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  3. vista3889[chr1:172445364-172445579]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3889[chr1:172445364-172445579]
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Tissue distribution of vista3889
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Transcription factor that possibly regulate vista3889[chr1:172445364-172445579]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172445368 172445373 GATA2 JASPAR yes 33130772
chr1 172445368 172445373 GATA2 JASPAR yes 118398925
chr1 172445380 172445400 RREB1 JASPAR yes 33130773
chr1 172445380 172445400 RREB1 JASPAR yes 118398926
chr1 172445383 172445398 RUNX2 JASPAR yes 33130774
chr1 172445383 172445398 RUNX2 JASPAR yes 118398927
chr1 172445384 172445404 RREB1 JASPAR yes 33130775
chr1 172445384 172445404 RREB1 JASPAR yes 118398928
chr1 172445385 172445397 FOXI1 JASPAR yes 33130776
chr1 172445385 172445397 FOXI1 JASPAR yes 118398929
chr1 172445385 172445405 RREB1 JASPAR yes 33130777
chr1 172445385 172445405 RREB1 JASPAR yes 118398930
chr1 172445402 172445410 GATA3 JASPAR yes 33130778
chr1 172445402 172445410 GATA5 JASPAR yes 33130779
chr1 172445402 172445410 GATA3 JASPAR yes 118398931
chr1 172445402 172445410 GATA5 JASPAR yes 118398932
chr1 172445412 172445422 RELA JASPAR yes 33130780
chr1 172445412 172445422 REL JASPAR yes 33130781
chr1 172445412 172445422 RELA JASPAR yes 118398933
chr1 172445412 172445422 REL JASPAR yes 118398934
chr1 172445412 172445423 NFKB1 JASPAR yes 33130782
chr1 172445412 172445423 NFKB1 JASPAR yes 118398935
chr1 172445412 172445425 NFKB1 JASPAR yes 33130783
chr1 172445412 172445425 NFKB2 JASPAR yes 33130784
chr1 172445412 172445425 NFKB1 JASPAR yes 118398936
chr1 172445412 172445425 NFKB2 JASPAR yes 118398937
chr1 172445413 172445423 NFKB1 JASPAR yes 33130785
chr1 172445413 172445423 RELA JASPAR yes 33130786
chr1 172445413 172445423 NFKB1 JASPAR yes 118398938
chr1 172445413 172445423 RELA JASPAR yes 118398939
chr1 172445413 172445424 NFKB1 JASPAR yes 33130787
chr1 172445413 172445424 NFKB1 JASPAR yes 118398940
chr1 172445418 172445429 EBF1 JASPAR yes 33130788
chr1 172445418 172445429 EBF1 JASPAR yes 118398941
chr1 172445419 172445425 MZF1 JASPAR yes 33130789
chr1 172445419 172445425 MZF1 JASPAR yes 118398942
chr1 172445429 172445440 NFKB1 JASPAR yes 33130790
chr1 172445429 172445440 NFKB1 JASPAR yes 118398943
chr1 172445430 172445440 REL JASPAR yes 33130791
chr1 172445430 172445440 REL JASPAR yes 118398944
chr1 172445475 172445481 PTF TRANSFAC yes 33130792
chr1 172445475 172445481 PTF TRANSFAC yes 118398945
chr1 172445491 172445506 STAT1 JASPAR yes 33130793
chr1 172445491 172445506 STAT1 JASPAR yes 118398946
chr1 172445493 172445504 STAT1 JASPAR yes 33130794
chr1 172445493 172445504 STAT3 JASPAR yes 33130795
chr1 172445493 172445504 STAT1 JASPAR yes 118398947
chr1 172445493 172445504 STAT3 JASPAR yes 118398948
chr1 172445503 172445512 JDP2 JASPAR yes 33130796
chr1 172445503 172445512 JDP2 JASPAR yes 118398949
chr1 172445523 172445529 MAZ TRANSFAC yes 33130797
chr1 172445523 172445529 MAZ TRANSFAC yes 118398950
chr1 172445530 172445551 ZNF263 JASPAR yes 33130798
chr1 172445530 172445551 ZNF263 JASPAR yes 118398951
chr1 172445543 172445561 NR3C1 JASPAR yes 33130799
chr1 172445543 172445561 NR3C1 JASPAR yes 118398952
chr1 172445546 172445560 XBP1 JASPAR yes 33130800
chr1 172445546 172445560 XBP1 JASPAR yes 118398953
chr1 172445546 172445566 TP53 JASPAR yes 33130801
chr1 172445546 172445566 TP53 JASPAR yes 118398954
chr1 172445548 172445568 TP63 JASPAR yes 33130802
chr1 172445548 172445568 TP63 JASPAR yes 118398955
chr1 172445549 172445567 TP53 JASPAR yes 33130803
chr1 172445549 172445567 TP63 JASPAR yes 33130804
chr1 172445549 172445567 TP73 JASPAR yes 33130805
chr1 172445549 172445567 TP53 JASPAR yes 118398956
chr1 172445549 172445567 TP63 JASPAR yes 118398957
chr1 172445549 172445567 TP73 JASPAR yes 118398958
chr1 172445550 172445565 TP53 JASPAR yes 33130806
chr1 172445550 172445565 TP53 JASPAR yes 118398959
chr1 172445579 172445584 GATA2 JASPAR yes 33130807
chr1 172445579 172445584 GATA2 JASPAR yes 118398960
SNP sites on vista3889[chr1:172445364-172445579]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172445370 rs75373873 G A
GATA2
728772
Genes possibly regulated by vista3889[chr1:172445364-172445579]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172339329 172413230 - PIGC ENSG00000135845.5 172413230 0.69 0.99 1571 67866
chr1 172389828 172437971 + C1orf105 ENSG00000180999.6 172389828 0.96 0.91 1572 44464
chr1 172501489 172580971 + SUCO ENSG00000094975.9 172501489 0.73 0.99 1573 44090
Expression level of Genes
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miRNAs possibly regulated by vista3889[chr1:172445364-172445579]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results