EnhancerDB
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  3. vista389[chr1:12231693-12231881]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista389[chr1:12231693-12231881]
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Tissue distribution of vista389
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Transcription factor that possibly regulate vista389[chr1:12231693-12231881]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12231725 12231745 RREB1 JASPAR yes 26805726
chr1 12231725 12231745 RREB1 JASPAR yes 118232019
chr1 12231732 12231738 LEF1 TRANSFAC yes 26805727
chr1 12231732 12231738 SOX10 JASPAR yes 26805728
chr1 12231732 12231738 LEF1 TRANSFAC yes 118232020
chr1 12231732 12231738 SOX10 JASPAR yes 118232021
chr1 12231740 12231753 NFKB2 JASPAR yes 26805729
chr1 12231740 12231753 NFKB2 JASPAR yes 118232022
chr1 12231741 12231751 NFKB1 JASPAR yes 26805730
chr1 12231741 12231751 NFKB1 JASPAR yes 118232023
chr1 12231741 12231752 NFKB1 JASPAR yes 26805731
chr1 12231741 12231752 NFKB1 JASPAR yes 118232024
chr1 12231741 12231762 REST JASPAR yes 26805732
chr1 12231741 12231762 REST JASPAR yes 118232025
chr1 12231742 12231761 REST JASPAR yes 26805733
chr1 12231742 12231761 REST JASPAR yes 118232026
chr1 12231745 12231749 NFE TRANSFAC yes 26805734
chr1 12231745 12231749 NFE TRANSFAC yes 118232027
chr1 12231765 12231773 FOXO3 JASPAR yes 26805735
chr1 12231765 12231773 FOXO3 JASPAR yes 118232028
chr1 12231797 12231803 YY1 JASPAR yes 26805736
chr1 12231797 12231803 YY1 JASPAR yes 118232029
chr1 12231812 12231822 SP1 JASPAR yes 26805737
chr1 12231812 12231822 SP1 JASPAR yes 118232030
chr1 12231813 12231824 E2F6 JASPAR yes 26805738
chr1 12231813 12231824 E2F6 JASPAR yes 118232031
chr1 12231822 12231837 MEF2C JASPAR yes 26805739
chr1 12231822 12231837 MEF2C JASPAR yes 118232032
chr1 12231823 12231838 MEF2A JASPAR yes 26805740
chr1 12231823 12231838 MEF2A JASPAR yes 118232033
chr1 12231852 12231866 EBF1 JASPAR yes 26805741
chr1 12231852 12231866 EBF1 JASPAR yes 118232034
chr1 12231855 12231875 RREB1 JASPAR yes 26805742
chr1 12231855 12231875 RREB1 JASPAR yes 118232035
chr1 12231866 12231879 NFKB1 JASPAR yes 26805743
chr1 12231866 12231879 NFKB2 JASPAR yes 26805744
chr1 12231866 12231879 NFKB1 JASPAR yes 118232036
chr1 12231866 12231879 NFKB2 JASPAR yes 118232037
chr1 12231867 12231880 NFKB2 JASPAR yes 26805745
chr1 12231867 12231880 NFKB2 JASPAR yes 118232038
SNP sites on vista389[chr1:12231693-12231881]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista389[chr1:12231693-12231881]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12227060 12269285 + TNFRSF1B ENSG00000028137.12 12227060 0.88 0.96 167 95367
chr1 12290124 12572099 + VPS13D ENSG00000048707.9 12290124 0.64 1.0 168 41757
Expression level of Genes
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miRNAs possibly regulated by vista389[chr1:12231693-12231881]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results