EnhancerDB
  1. Home
  2. Enhancers
  3. vista3896[chr1:172608229-172608375]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3896[chr1:172608229-172608375]
Back to top
Tissue distribution of vista3896
Back to top
Transcription factor that possibly regulate vista3896[chr1:172608229-172608375]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172607976 172608376 FOS UCSC Txn Factor no Conserved 107845884
chr1 172608219 172608233 PAX6 JASPAR yes 33142347
chr1 172608219 172608233 PAX6 JASPAR yes 118399313
chr1 172608234 172608249 LEF1 JASPAR yes 33142348
chr1 172608234 172608249 LEF1 JASPAR yes 118399314
chr1 172608258 172608278 TP63 JASPAR yes 33142349
chr1 172608258 172608278 TP63 JASPAR yes 118399315
chr1 172608259 172608277 TP53 JASPAR yes 33142350
chr1 172608259 172608277 TP53 JASPAR yes 118399316
chr1 172608283 172608287 YY1 TRANSFAC yes 33142351
chr1 172608283 172608287 YY1 TRANSFAC yes 118399317
chr1 172608293 172608307 FOXF2 JASPAR yes 33142352
chr1 172608293 172608307 FOXF2 JASPAR yes 118399318
chr1 172608294 172608308 GATA2 JASPAR yes 33142353
chr1 172608294 172608308 GATA2 JASPAR yes 118399319
chr1 172608296 172608304 GATA3 JASPAR yes 33142354
chr1 172608296 172608304 GATA3 JASPAR yes 118399320
chr1 172608296 172608307 FOXP2 JASPAR yes 33142355
chr1 172608296 172608307 FOXP2 JASPAR yes 118399321
chr1 172608301 172608312 SPDEF JASPAR yes 33142356
chr1 172608301 172608312 SPDEF JASPAR yes 118399322
chr1 172608316 172608320 TEAD2 TRANSFAC yes 33142357
chr1 172608316 172608320 TEAD2 TRANSFAC yes 118399323
chr1 172608324 172608344 RREB1 JASPAR yes 33142358
chr1 172608324 172608344 RREB1 JASPAR yes 118399324
chr1 172608326 172608338 IRF1 JASPAR yes 33142359
chr1 172608326 172608338 IRF1 JASPAR yes 118399325
chr1 172608330 172608342 HNF1B JASPAR yes 33142360
chr1 172608330 172608342 HNF1B JASPAR yes 118399326
chr1 172608375 172608380 GATA1 TRANSFAC yes 33142361
chr1 172608375 172608380 GATA1 TRANSFAC yes 118399327
SNP sites on vista3896[chr1:172608229-172608375]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista3896[chr1:172608229-172608375]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172628154 172636014 + FASLG ENSG00000117560.6 172628154 0.93 1.0 1574 80221
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3896[chr1:172608229-172608375]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results