EnhancerDB
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  3. vista3897[chr1:172630377-172630501]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3897[chr1:172630377-172630501]
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Tissue distribution of vista3897
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Transcription factor that possibly regulate vista3897[chr1:172630377-172630501]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172630400 172630406 YY1 JASPAR yes 118399328
chr1 172630416 172630437 IRF1 JASPAR yes 118399329
chr1 172630418 172630433 STAT2 JASPAR yes 118399330
chr1 172630419 172630433 STAT1 JASPAR yes 118399331
chr1 172630420 172630434 IRF8 JASPAR yes 118399332
chr1 172630432 172630441 ELK4 JASPAR yes 118399333
chr1 172630432 172630442 ELK1 JASPAR yes 118399334
chr1 172630432 172630442 ELK3 JASPAR yes 118399335
chr1 172630432 172630442 ERG JASPAR yes 118399336
chr1 172630432 172630442 ETS1 JASPAR yes 118399337
chr1 172630432 172630442 ETV1 JASPAR yes 118399338
chr1 172630432 172630442 ETV3 JASPAR yes 118399339
chr1 172630432 172630442 ETV4 JASPAR yes 118399340
chr1 172630432 172630442 ETV5 JASPAR yes 118399341
chr1 172630432 172630442 FEV JASPAR yes 118399342
chr1 172630432 172630442 FLI1 JASPAR yes 118399343
chr1 172630465 172630469 NFE TRANSFAC yes 118399344
chr1 172630472 172630476 NFE TRANSFAC yes 118399345
chr1 172630473 172630478 GATA2 JASPAR yes 118399346
SNP sites on vista3897[chr1:172630377-172630501]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172630454 rs2022556 T C no 730046
chr1 172630464 rs567763177 G A no 730047
Genes possibly regulated by vista3897[chr1:172630377-172630501]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172628154 172636014 + FASLG ENSG00000117560.6 172628154 0.93 1.0 1574 97777
Expression level of Genes
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miRNAs possibly regulated by vista3897[chr1:172630377-172630501]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results