EnhancerDB
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  3. vista3898[chr1:172631926-172632270]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3898[chr1:172631926-172632270]
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Tissue distribution of vista3898
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Transcription factor that possibly regulate vista3898[chr1:172631926-172632270]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172631908 172632172 RUNX3 UCSC Txn Factor no Conserved 107845924
chr1 172631929 172631932 MYB TRANSFAC yes 118399347
chr1 172631953 172631958 GATA2 JASPAR yes 118399348
chr1 172631956 172631960 TEAD2 TRANSFAC yes 118399349
chr1 172631956 172631961 TBP TRANSFAC yes 118399350
chr1 172631965 172631980 SCRT1 JASPAR yes 118399351
chr1 172631968 172631981 ZBTB18 JASPAR yes 118399352
chr1 172631970 172631980 MAX JASPAR yes 118399353
chr1 172631981 172631996 STAT2 JASPAR yes 118399354
chr1 172631982 172631996 STAT1 JASPAR yes 118399355
chr1 172631987 172631998 ELK4 JASPAR yes 118399356
chr1 172631987 172631998 FLI1 JASPAR yes 118399357
chr1 172632004 172632018 TLX1 JASPAR yes 118399358
chr1 172632005 172632019 TLX1 JASPAR yes 118399359
chr1 172632023 172632043 RREB1 JASPAR yes 118399360
chr1 172632036 172632046 RUNX3 JASPAR yes 118399361
chr1 172632037 172632046 RUNX2 JASPAR yes 118399362
chr1 172632045 172632055 TEAD1 JASPAR yes 118399363
chr1 172632046 172632054 TEAD3 JASPAR yes 118399364
chr1 172632063 172632078 STAT2 JASPAR yes 118399365
chr1 172632072 172632083 ETV2 JASPAR yes 118399366
chr1 172632086 172632089 MYB TRANSFAC yes 118399367
chr1 172632086 172632094 MGA JASPAR yes 118399368
chr1 172632086 172632094 TBX15 JASPAR yes 118399369
chr1 172632086 172632094 TBX1 JASPAR yes 118399370
chr1 172632086 172632094 TBX4 JASPAR yes 118399371
chr1 172632086 172632094 TBX5 JASPAR yes 118399372
chr1 172632101 172632106 SP1 TRANSFAC yes 118399373
chr1 172632108 172632125 PAX9 JASPAR yes 118399374
chr1 172632123 172632136 NR2F1 JASPAR yes 118399375
chr1 172632127 172632131 ESR1 TRANSFAC yes 118399376
chr1 172632133 172632151 MAFF JASPAR yes 118399377
chr1 172632154 172632165 FOXH1 JASPAR yes 118399378
chr1 172632155 172632161 ZNF354C JASPAR yes 118399379
chr1 172632158 172632163 NFY TRANSFAC yes 118399380
chr1 172632173 172632185 TAL1 JASPAR yes 118399381
chr1 172632174 172632186 BHLHE23 JASPAR yes 118399382
chr1 172632175 172632185 BHLHE22 JASPAR yes 118399383
chr1 172632175 172632185 NEUROD2 JASPAR yes 118399384
chr1 172632175 172632185 OLIG1 JASPAR yes 118399385
chr1 172632175 172632185 OLIG2 JASPAR yes 118399386
chr1 172632175 172632185 OLIG3 JASPAR yes 118399387
chr1 172632195 172632205 EVX1 JASPAR yes 118399388
chr1 172632195 172632205 EVX2 JASPAR yes 118399389
chr1 172632230 172632246 POU4F3 JASPAR yes 118399390
chr1 172632232 172632244 FOXI1 JASPAR yes 118399391
chr1 172632235 172632239 YY1 TRANSFAC yes 118399392
chr1 172632240 172632245 MYB TRANSFAC yes 118399393
chr1 172632264 172632268 YY1 TRANSFAC yes 118399394
SNP sites on vista3898[chr1:172631926-172632270]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172632057 rs929087 A G
RUNX3
730064
chr1 172632148 rs537996794 T C
MAFF RUNX3
730065
Genes possibly regulated by vista3898[chr1:172631926-172632270]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172628154 172636014 + FASLG ENSG00000117560.6 172628154 0.93 1.0 1574 96228
Expression level of Genes
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miRNAs possibly regulated by vista3898[chr1:172631926-172632270]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results