EnhancerDB
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  3. vista390[chr1:12232096-12232448]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista390[chr1:12232096-12232448]
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Tissue distribution of vista390
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Transcription factor that possibly regulate vista390[chr1:12232096-12232448]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12232083 12232097 NR2F1 JASPAR yes 26805764
chr1 12232083 12232097 RXRB JASPAR yes 26805765
chr1 12232083 12232097 RXRG JASPAR yes 26805766
chr1 12232083 12232097 NR2F1 JASPAR yes 118232039
chr1 12232083 12232097 RXRB JASPAR yes 118232040
chr1 12232083 12232097 RXRG JASPAR yes 118232041
chr1 12232092 12232096 H4TF2 TRANSFAC yes 26805767
chr1 12232092 12232096 H4TF2 TRANSFAC yes 118232042
chr1 12232095 12232107 E2F8 JASPAR yes 26805768
chr1 12232095 12232107 E2F8 JASPAR yes 118232043
chr1 12232096 12232117 ZNF263 JASPAR yes 26805769
chr1 12232096 12232117 ZNF263 JASPAR yes 118232044
chr1 12232099 12232105 MZF1 JASPAR yes 26805770
chr1 12232099 12232105 MZF1 JASPAR yes 118232045
chr1 12232110 12232131 ZNF263 JASPAR yes 26805771
chr1 12232110 12232131 ZNF263 JASPAR yes 118232046
chr1 12232145 12232150 SP1 TRANSFAC yes 26805772
chr1 12232145 12232150 SP1 TRANSFAC yes 118232047
chr1 12232157 12232171 JUN JASPAR yes 26805773
chr1 12232157 12232171 JUN JASPAR yes 118232048
chr1 12232160 12232171 FOSL2 JASPAR yes 26805774
chr1 12232160 12232171 JUNB JASPAR yes 26805775
chr1 12232160 12232171 FOSL2 JASPAR yes 118232049
chr1 12232160 12232171 JUNB JASPAR yes 118232050
chr1 12232161 12232172 FOS JASPAR yes 26805776
chr1 12232161 12232172 FOSL1 JASPAR yes 26805777
chr1 12232161 12232172 JUND JASPAR yes 26805778
chr1 12232161 12232172 FOS JASPAR yes 118232051
chr1 12232161 12232172 FOSL1 JASPAR yes 118232052
chr1 12232161 12232172 JUND JASPAR yes 118232053
chr1 12232162 12232169 JUN TRANSFAC yes 26805779
chr1 12232162 12232169 JUN TRANSFAC yes 118232054
chr1 12232182 12232192 MAX JASPAR yes 26805780
chr1 12232182 12232192 MAX JASPAR yes 118232055
chr1 12232197 12232218 ZNF263 JASPAR yes 26805781
chr1 12232197 12232218 ZNF263 JASPAR yes 118232056
chr1 12232203 12232207 LFA1 TRANSFAC yes 26805782
chr1 12232203 12232207 LFA1 TRANSFAC yes 118232057
chr1 12232208 12232219 E2F6 JASPAR yes 26805783
chr1 12232208 12232219 E2F6 JASPAR yes 118232058
chr1 12232212 12232217 ETS2 TRANSFAC yes 26805784
chr1 12232212 12232217 ETS2 TRANSFAC yes 118232059
chr1 12232212 12232232 RREB1 JASPAR yes 26805785
chr1 12232212 12232232 RREB1 JASPAR yes 118232060
chr1 12232237 12232258 ZNF263 JASPAR yes 26805786
chr1 12232237 12232258 ZNF263 JASPAR yes 118232061
chr1 12232244 12232259 LEF1 JASPAR yes 26805787
chr1 12232244 12232259 LEF1 JASPAR yes 118232062
chr1 12232247 12232257 LEF1 TRANSFAC yes 26805788
chr1 12232247 12232257 LEF1 TRANSFAC yes 118232063
chr1 12232249 12232255 SOX10 JASPAR yes 26805789
chr1 12232249 12232255 SOX10 JASPAR yes 118232064
chr1 12232291 12232310 CTCF JASPAR yes 26805790
chr1 12232291 12232310 CTCF JASPAR yes 118232065
chr1 12232299 12232304 ETS2 TRANSFAC yes 26805791
chr1 12232299 12232304 ETS2 TRANSFAC yes 118232066
chr1 12232316 12232327 EBF1 JASPAR yes 26805792
chr1 12232316 12232327 EBF1 JASPAR yes 118232067
chr1 12232320 12232325 TFAP2A TRANSFAC yes 26805793
chr1 12232320 12232325 TFAP2A TRANSFAC yes 118232068
chr1 12232320 12232326 MZF1 JASPAR yes 26805794
chr1 12232320 12232326 MZF1 JASPAR yes 118232069
chr1 12232322 12232333 NFKB1 JASPAR yes 26805795
chr1 12232322 12232333 NFKB1 JASPAR yes 118232070
chr1 12232323 12232333 REL JASPAR yes 26805796
chr1 12232323 12232333 REL JASPAR yes 118232071
chr1 12232340 12232346 JUN TRANSFAC yes 26805797
chr1 12232340 12232346 JUN TRANSFAC yes 118232072
chr1 12232344 12232358 GATA2 JASPAR yes 26805798
chr1 12232344 12232358 GATA2 JASPAR yes 118232073
chr1 12232346 12232354 GATA3 JASPAR yes 26805799
chr1 12232346 12232354 GATA3 JASPAR yes 118232074
chr1 12232379 12232394 ESR2 JASPAR yes 26805800
chr1 12232379 12232394 ESR2 JASPAR yes 118232075
chr1 12232379 12232399 ESR1 JASPAR yes 26805801
chr1 12232379 12232399 ESR1 JASPAR yes 118232076
chr1 12232386 12232397 ESRRA JASPAR yes 26805802
chr1 12232386 12232397 ESRRA JASPAR yes 118232077
chr1 12232394 12232398 LFA1 TRANSFAC yes 26805803
chr1 12232394 12232398 LFA1 TRANSFAC yes 118232078
chr1 12232406 12232410 NFE TRANSFAC yes 26805804
chr1 12232406 12232410 NFE TRANSFAC yes 118232079
chr1 12232407 12232412 GATA2 JASPAR yes 26805805
chr1 12232407 12232412 GATA2 JASPAR yes 118232080
chr1 12232417 12232432 AR JASPAR yes 26805806
chr1 12232417 12232432 AR JASPAR yes 118232081
chr1 12232424 12232438 GATA2 JASPAR yes 26805807
chr1 12232424 12232438 GATA2 JASPAR yes 118232082
chr1 12232428 12232436 GATA3 JASPAR yes 26805808
chr1 12232428 12232436 GATA5 JASPAR yes 26805809
chr1 12232428 12232436 GATA3 JASPAR yes 118232083
chr1 12232428 12232436 GATA5 JASPAR yes 118232084
SNP sites on vista390[chr1:12232096-12232448]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12232344 rs17882445 A G
GATA2 JUN
84457
chr1 12232354 rs142021213 C A,T
GATA2 GATA3
84458
Genes possibly regulated by vista390[chr1:12232096-12232448]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12227060 12269285 + TNFRSF1B ENSG00000028137.12 12227060 0.88 0.96 167 94964
chr1 12290124 12572099 + VPS13D ENSG00000048707.9 12290124 0.64 1.0 168 42324
Expression level of Genes
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miRNAs possibly regulated by vista390[chr1:12232096-12232448]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results