EnhancerDB
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  3. vista3900[chr1:172666682-172666997]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3900[chr1:172666682-172666997]
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Tissue distribution of vista3900
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Transcription factor that possibly regulate vista3900[chr1:172666682-172666997]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172666680 172666685 SP1 TRANSFAC yes 33146916
chr1 172666680 172666685 SP1 TRANSFAC yes 118399423
chr1 172666686 172666690 NFE TRANSFAC yes 33146917
chr1 172666686 172666690 NFE TRANSFAC yes 118399424
chr1 172666748 172666758 GABPA JASPAR yes 33146918
chr1 172666748 172666758 GABPA JASPAR yes 118399425
chr1 172666751 172666758 SPIB JASPAR yes 33146919
chr1 172666751 172666758 SPIB JASPAR yes 118399426
chr1 172666775 172666786 ELK4 JASPAR yes 33146920
chr1 172666775 172666786 FLI1 JASPAR yes 33146921
chr1 172666775 172666786 ELK4 JASPAR yes 118399427
chr1 172666775 172666786 FLI1 JASPAR yes 118399428
chr1 172666775 172666788 ELF3 JASPAR yes 33146922
chr1 172666775 172666788 ELF3 JASPAR yes 118399429
chr1 172666775 172666790 AR JASPAR yes 33146923
chr1 172666775 172666790 AR JASPAR yes 118399430
chr1 172666776 172666786 ELK3 JASPAR yes 33146924
chr1 172666776 172666786 ERF JASPAR yes 33146925
chr1 172666776 172666786 ERG JASPAR yes 33146926
chr1 172666776 172666786 ETS1 JASPAR yes 33146927
chr1 172666776 172666786 ETV6 JASPAR yes 33146928
chr1 172666776 172666786 FEV JASPAR yes 33146929
chr1 172666776 172666786 FLI1 JASPAR yes 33146930
chr1 172666776 172666786 GABPA JASPAR yes 33146931
chr1 172666776 172666786 ELK3 JASPAR yes 118399431
chr1 172666776 172666786 ERF JASPAR yes 118399432
chr1 172666776 172666786 ERG JASPAR yes 118399433
chr1 172666776 172666786 ETS1 JASPAR yes 118399434
chr1 172666776 172666786 ETV6 JASPAR yes 118399435
chr1 172666776 172666786 FEV JASPAR yes 118399436
chr1 172666776 172666786 FLI1 JASPAR yes 118399437
chr1 172666776 172666786 GABPA JASPAR yes 118399438
chr1 172666776 172666787 ELF5 JASPAR yes 33146932
chr1 172666776 172666787 ETV2 JASPAR yes 33146933
chr1 172666776 172666787 ELF5 JASPAR yes 118399439
chr1 172666776 172666787 ETV2 JASPAR yes 118399440
chr1 172666776 172666788 EHF JASPAR yes 33146934
chr1 172666776 172666788 ELF1 JASPAR yes 33146935
chr1 172666776 172666788 ELF4 JASPAR yes 33146936
chr1 172666776 172666788 EHF JASPAR yes 118399441
chr1 172666776 172666788 ELF1 JASPAR yes 118399442
chr1 172666776 172666788 ELF4 JASPAR yes 118399443
chr1 172666776 172666789 ELF1 JASPAR yes 33146937
chr1 172666776 172666789 ELF1 JASPAR yes 118399444
chr1 172666776 172666790 SPI1 JASPAR yes 33146938
chr1 172666776 172666790 SPIC JASPAR yes 33146939
chr1 172666776 172666790 SPI1 JASPAR yes 118399445
chr1 172666776 172666790 SPIC JASPAR yes 118399446
chr1 172666777 172666784 SPI1 JASPAR yes 33146940
chr1 172666777 172666784 SPI1 JASPAR yes 118399447
chr1 172666777 172666785 EHF JASPAR yes 33146941
chr1 172666777 172666785 FEV JASPAR yes 33146942
chr1 172666777 172666785 EHF JASPAR yes 118399448
chr1 172666777 172666785 FEV JASPAR yes 118399449
chr1 172666786 172666797 EBF1 JASPAR yes 33146943
chr1 172666786 172666797 EBF1 JASPAR yes 118399450
chr1 172666787 172666801 SPIC JASPAR yes 33146944
chr1 172666787 172666801 SPIC JASPAR yes 118399451
chr1 172666834 172666849 SOX21 JASPAR yes 33146945
chr1 172666834 172666849 SOX21 JASPAR yes 118399452
chr1 172666842 172666856 STAT1 JASPAR yes 33146946
chr1 172666842 172666856 STAT1 JASPAR yes 118399453
chr1 172666843 172666855 IRF1 JASPAR yes 33146947
chr1 172666843 172666855 IRF1 JASPAR yes 118399454
chr1 172666848 172666852 YY1 TRANSFAC yes 33146948
chr1 172666848 172666852 YY1 TRANSFAC yes 118399455
chr1 172666849 172666857 FEV JASPAR yes 33146949
chr1 172666849 172666857 FEV JASPAR yes 118399456
chr1 172666864 172666875 BATF JASPAR yes 33146950
chr1 172666864 172666875 BATF JASPAR yes 118399457
chr1 172666880 172666886 ZNF354C JASPAR yes 33146951
chr1 172666880 172666886 ZNF354C JASPAR yes 118399458
chr1 172666881 172666890 NKX3-2 JASPAR yes 33146952
chr1 172666881 172666890 NKX3-2 JASPAR yes 118399459
chr1 172666889 172666893 ESR1 TRANSFAC yes 33146953
chr1 172666889 172666893 ESR1 TRANSFAC yes 118399460
chr1 172666900 172666903 MYB TRANSFAC yes 33146954
chr1 172666900 172666903 MYB TRANSFAC yes 118399461
chr1 172666918 172666932 GATA2 JASPAR yes 33146955
chr1 172666918 172666932 GATA2 JASPAR yes 118399462
chr1 172666920 172666926 GATA1 TRANSFAC yes 33146956
chr1 172666920 172666926 GATA1 TRANSFAC yes 118399463
chr1 172666928 172666938 POU6F2 JASPAR yes 33146957
chr1 172666928 172666938 POU6F2 JASPAR yes 118399464
chr1 172666929 172666939 ALX3 JASPAR yes 33146958
chr1 172666929 172666939 EMX1 JASPAR yes 33146959
chr1 172666929 172666939 EMX2 JASPAR yes 33146960
chr1 172666929 172666939 EN2 JASPAR yes 33146961
chr1 172666929 172666939 ESX1 JASPAR yes 33146962
chr1 172666929 172666939 EVX1 JASPAR yes 33146963
chr1 172666929 172666939 EVX2 JASPAR yes 33146964
chr1 172666929 172666939 GBX1 JASPAR yes 33146965
chr1 172666929 172666939 GBX2 JASPAR yes 33146966
chr1 172666929 172666939 GSX1 JASPAR yes 33146967
chr1 172666929 172666939 GSX2 JASPAR yes 33146968
chr1 172666929 172666939 HESX1 JASPAR yes 33146969
chr1 172666929 172666939 HOXA2 JASPAR yes 33146970
chr1 172666929 172666939 HOXB2 JASPAR yes 33146971
chr1 172666929 172666939 HOXB3 JASPAR yes 33146972
chr1 172666929 172666939 LBX2 JASPAR yes 33146973
chr1 172666929 172666939 LHX2 JASPAR yes 33146974
chr1 172666929 172666939 LHX6 JASPAR yes 33146975
chr1 172666929 172666939 MEOX1 JASPAR yes 33146976
chr1 172666929 172666939 MIXL1 JASPAR yes 33146977
chr1 172666929 172666939 NOTO JASPAR yes 33146978
chr1 172666929 172666939 POU6F1 JASPAR yes 33146979
chr1 172666929 172666939 RAX JASPAR yes 33146980
chr1 172666929 172666939 ALX3 JASPAR yes 118399465
chr1 172666929 172666939 EMX1 JASPAR yes 118399466
chr1 172666929 172666939 EMX2 JASPAR yes 118399467
chr1 172666929 172666939 EN2 JASPAR yes 118399468
chr1 172666929 172666939 ESX1 JASPAR yes 118399469
chr1 172666929 172666939 EVX1 JASPAR yes 118399470
chr1 172666929 172666939 EVX2 JASPAR yes 118399471
chr1 172666929 172666939 GBX1 JASPAR yes 118399472
chr1 172666929 172666939 GBX2 JASPAR yes 118399473
chr1 172666929 172666939 GSX1 JASPAR yes 118399474
chr1 172666929 172666939 GSX2 JASPAR yes 118399475
chr1 172666929 172666939 HESX1 JASPAR yes 118399476
chr1 172666929 172666939 HOXA2 JASPAR yes 118399477
chr1 172666929 172666939 HOXB2 JASPAR yes 118399478
chr1 172666929 172666939 HOXB3 JASPAR yes 118399479
chr1 172666929 172666939 LBX2 JASPAR yes 118399480
chr1 172666929 172666939 LHX2 JASPAR yes 118399481
chr1 172666929 172666939 LHX6 JASPAR yes 118399482
chr1 172666929 172666939 MEOX1 JASPAR yes 118399483
chr1 172666929 172666939 MIXL1 JASPAR yes 118399484
chr1 172666929 172666939 NOTO JASPAR yes 118399485
chr1 172666929 172666939 POU6F1 JASPAR yes 118399486
chr1 172666929 172666939 RAX JASPAR yes 118399487
chr1 172666930 172666938 EN1 JASPAR yes 33146981
chr1 172666930 172666938 ISX JASPAR yes 33146982
chr1 172666930 172666938 LBX1 JASPAR yes 33146983
chr1 172666930 172666938 LHX9 JASPAR yes 33146984
chr1 172666930 172666938 PAX4 JASPAR yes 33146985
chr1 172666930 172666938 PDX1 JASPAR yes 33146986
chr1 172666930 172666938 PRRX1 JASPAR yes 33146987
chr1 172666930 172666938 RAX2 JASPAR yes 33146988
chr1 172666930 172666938 SHOX JASPAR yes 33146989
chr1 172666930 172666938 UNCX JASPAR yes 33146990
chr1 172666930 172666938 VAX1 JASPAR yes 33146991
chr1 172666930 172666938 VAX2 JASPAR yes 33146992
chr1 172666930 172666938 VSX1 JASPAR yes 33146993
chr1 172666930 172666938 VSX2 JASPAR yes 33146994
chr1 172666930 172666938 EN1 JASPAR yes 118399488
chr1 172666930 172666938 ISX JASPAR yes 118399489
chr1 172666930 172666938 LBX1 JASPAR yes 118399490
chr1 172666930 172666938 LHX9 JASPAR yes 118399491
chr1 172666930 172666938 PAX4 JASPAR yes 118399492
chr1 172666930 172666938 PDX1 JASPAR yes 118399493
chr1 172666930 172666938 PRRX1 JASPAR yes 118399494
chr1 172666930 172666938 RAX2 JASPAR yes 118399495
chr1 172666930 172666938 SHOX JASPAR yes 118399496
chr1 172666930 172666938 UNCX JASPAR yes 118399497
chr1 172666930 172666938 VAX1 JASPAR yes 118399498
chr1 172666930 172666938 VAX2 JASPAR yes 118399499
chr1 172666930 172666938 VSX1 JASPAR yes 118399500
chr1 172666930 172666938 VSX2 JASPAR yes 118399501
chr1 172666932 172666946 E2F7 JASPAR yes 33146995
chr1 172666932 172666946 E2F7 JASPAR yes 118399502
chr1 172666934 172666944 MZF1 JASPAR yes 33146996
chr1 172666934 172666944 MZF1 JASPAR yes 118399503
chr1 172666939 172666944 ETS2 TRANSFAC yes 33146997
chr1 172666939 172666944 ETS2 TRANSFAC yes 118399504
chr1 172666956 172666959 MYB TRANSFAC yes 33146998
chr1 172666956 172666959 MYB TRANSFAC yes 118399505
chr1 172666973 172666985 IRF1 JASPAR yes 33146999
chr1 172666973 172666985 IRF1 JASPAR yes 118399506
chr1 172666997 172667002 GATA2 JASPAR yes 33147000
chr1 172666997 172667002 GATA2 JASPAR yes 118399507
chr1 172666997 172667007 TFCP2 JASPAR yes 33147001
chr1 172666997 172667007 TFCP2 JASPAR yes 118399508
SNP sites on vista3900[chr1:172666682-172666997]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172666705 rs859666 G C no 730396
chr1 172666727 rs79355542 C T no 730397
chr1 172666747 rs2220728 C T no 730398
chr1 172666801 rs12095697 A C
SPIC
730399
chr1 172666821 rs12117954 G T no 730400
chr1 172666938 rs188464794 G A
ALX3 E2F7 EMX1 EMX2 EN1 EN2 ESX1 EVX1 EVX2 GBX1 GBX2 GSX1 GSX2 HESX1 HOXA2 HOXB2 HOXB3 ISX LBX1 LBX2 LHX2 LHX6 LHX9 MEOX1 MIXL1 MZF1 NOTO PAX4 PDX1 POU6F1 POU6F2 PRRX1 RAX RAX2 SHOX UNCX VAX1 VAX2 VSX1 VSX2
730401
Genes possibly regulated by vista3900[chr1:172666682-172666997]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172628154 172636014 + FASLG ENSG00000117560.6 172628154 0.93 1.0 1574 61472
Expression level of Genes
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miRNAs possibly regulated by vista3900[chr1:172666682-172666997]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results