EnhancerDB
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  3. vista3905[chr1:172723165-172723536]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3905[chr1:172723165-172723536]
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Tissue distribution of vista3905
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Transcription factor that possibly regulate vista3905[chr1:172723165-172723536]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172723169 172723180 ELK4 JASPAR yes 118399613
chr1 172723169 172723180 FLI1 JASPAR yes 118399614
chr1 172723169 172723182 ELF3 JASPAR yes 118399615
chr1 172723170 172723174 YY1 TRANSFAC yes 118399616
chr1 172723170 172723181 ELF5 JASPAR yes 118399617
chr1 172723170 172723182 EHF JASPAR yes 118399618
chr1 172723170 172723182 ELF1 JASPAR yes 118399619
chr1 172723170 172723183 ELF1 JASPAR yes 118399620
chr1 172723171 172723179 FEV JASPAR yes 118399621
chr1 172723198 172723212 E2F7 JASPAR yes 118399622
chr1 172723202 172723207 SP1 TRANSFAC yes 118399623
chr1 172723223 172723236 SMAD2 JASPAR yes 118399624
chr1 172723235 172723239 NFE TRANSFAC yes 118399625
chr1 172723236 172723254 IRF2 JASPAR yes 118399626
chr1 172723241 172723255 IRF8 JASPAR yes 118399627
chr1 172723256 172723262 YY1 JASPAR yes 118399628
chr1 172723265 172723270 SP1 TRANSFAC yes 118399629
chr1 172723276 172723297 IRF1 JASPAR yes 118399630
chr1 172723278 172723293 IRF9 JASPAR yes 118399631
chr1 172723279 172723293 IRF7 JASPAR yes 118399632
chr1 172723279 172723293 IRF8 JASPAR yes 118399633
chr1 172723281 172723296 SOX21 JASPAR yes 118399634
chr1 172723281 172723297 SOX4 JASPAR yes 118399635
chr1 172723294 172723301 NKX3-1 JASPAR yes 118399636
chr1 172723300 172723309 RUNX2 JASPAR yes 118399637
chr1 172723300 172723310 RUNX3 JASPAR yes 118399638
chr1 172723340 172723356 SOX4 JASPAR yes 118399639
chr1 172723352 172723362 EMX1 JASPAR yes 118399640
chr1 172723352 172723362 EMX2 JASPAR yes 118399641
chr1 172723352 172723362 ESX1 JASPAR yes 118399642
chr1 172723352 172723362 EVX1 JASPAR yes 118399643
chr1 172723352 172723362 EVX2 JASPAR yes 118399644
chr1 172723352 172723362 HESX1 JASPAR yes 118399645
chr1 172723352 172723362 HOXA2 JASPAR yes 118399646
chr1 172723352 172723362 HOXB2 JASPAR yes 118399647
chr1 172723352 172723362 HOXB3 JASPAR yes 118399648
chr1 172723352 172723362 LHX6 JASPAR yes 118399649
chr1 172723352 172723362 MNX1 JASPAR yes 118399650
chr1 172723352 172723362 RAX JASPAR yes 118399651
chr1 172723353 172723361 LMX1A JASPAR yes 118399652
chr1 172723353 172723361 LMX1B JASPAR yes 118399653
chr1 172723353 172723361 NKX6-1 JASPAR yes 118399654
chr1 172723353 172723361 NKX6-2 JASPAR yes 118399655
chr1 172723353 172723361 VAX1 JASPAR yes 118399656
chr1 172723353 172723361 VAX2 JASPAR yes 118399657
chr1 172723353 172723361 VSX1 JASPAR yes 118399658
chr1 172723353 172723361 VSX2 JASPAR yes 118399659
chr1 172723353 172723363 POU6F2 JASPAR yes 118399660
chr1 172723394 172723407 JUN JASPAR yes 118399661
chr1 172723423 172723433 GSC2 JASPAR yes 118399662
chr1 172723423 172723433 GSC JASPAR yes 118399663
chr1 172723424 172723432 OTX2 JASPAR yes 118399664
chr1 172723424 172723433 PITX3 JASPAR yes 118399665
chr1 172723424 172723437 DUXA JASPAR yes 118399666
chr1 172723440 172723455 HNF4G JASPAR yes 118399667
chr1 172723441 172723456 HNF4A JASPAR yes 118399668
chr1 172723443 172723447 ESR1 TRANSFAC yes 118399669
chr1 172723446 172723462 ZNF143 JASPAR yes 118399670
chr1 172723449 172723463 EBF1 JASPAR yes 118399671
chr1 172723492 172723503 EBF1 JASPAR yes 118399672
chr1 172723497 172723510 NFKB1 JASPAR yes 118399673
chr1 172723497 172723510 NFKB2 JASPAR yes 118399674
chr1 172723498 172723508 NFKB1 JASPAR yes 118399675
chr1 172723498 172723509 NFKB1 JASPAR yes 118399676
chr1 172723502 172723508 NFE2 TRANSFAC yes 118399677
chr1 172723515 172723533 ESR2 JASPAR yes 118399678
chr1 172723516 172723533 ESR1 JASPAR yes 118399679
chr1 172723516 172723534 ESR2 JASPAR yes 118399680
chr1 172723517 172723532 ESR2 JASPAR yes 118399681
chr1 172723518 172723524 NFIC JASPAR yes 118399682
chr1 172723520 172723524 H1TF2 TRANSFAC yes 118399683
chr1 172723520 172723524 NFE TRANSFAC yes 118399684
chr1 172723520 172723524 SRF TRANSFAC yes 118399685
chr1 172723530 172723534 NFE TRANSFAC yes 118399686
SNP sites on vista3905[chr1:172723165-172723536]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172723274 rs114215540 A C no 730859
chr1 172723524 rs859628 A G
ESR1 ESR2 H1TF2 NFE NFIC SRF
730860
Genes possibly regulated by vista3905[chr1:172723165-172723536]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172628154 172636014 + FASLG ENSG00000117560.6 172628154 0.93 1.0 1574 4989
Expression level of Genes
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miRNAs possibly regulated by vista3905[chr1:172723165-172723536]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results