EnhancerDB
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  3. vista3906[chr1:172727569-172727695]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3906[chr1:172727569-172727695]
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Tissue distribution of vista3906
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Transcription factor that possibly regulate vista3906[chr1:172727569-172727695]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172727576 172727590 JUN JASPAR yes 118399687
chr1 172727579 172727590 FOSL2 JASPAR yes 118399688
chr1 172727579 172727590 JUNB JASPAR yes 118399689
chr1 172727580 172727591 FOS JASPAR yes 118399690
chr1 172727606 172727627 ZNF263 JASPAR yes 118399691
chr1 172727626 172727640 SPI1 JASPAR yes 118399692
chr1 172727634 172727655 ZNF263 JASPAR yes 118399693
chr1 172727637 172727658 ZNF263 JASPAR yes 118399694
chr1 172727638 172727659 ZNF263 JASPAR yes 118399695
chr1 172727639 172727660 IRF1 JASPAR yes 118399696
chr1 172727641 172727647 SP1 TRANSFAC yes 118399697
chr1 172727641 172727651 SP1 JASPAR yes 118399698
chr1 172727641 172727651 ZNF740 JASPAR yes 118399699
chr1 172727647 172727662 PRDM1 JASPAR yes 118399700
chr1 172727661 172727672 PROP1 JASPAR yes 118399701
chr1 172727663 172727684 IRF1 JASPAR yes 118399702
chr1 172727665 172727680 PRDM1 JASPAR yes 118399703
chr1 172727665 172727680 STAT2 JASPAR yes 118399704
chr1 172727666 172727680 SPIC JASPAR yes 118399705
chr1 172727666 172727680 STAT1 JASPAR yes 118399706
chr1 172727668 172727689 IRF1 JASPAR yes 118399707
chr1 172727669 172727690 IRF1 JASPAR yes 118399708
chr1 172727670 172727675 ETS2 TRANSFAC yes 118399709
chr1 172727670 172727691 IRF1 JASPAR yes 118399710
chr1 172727671 172727692 IRF1 JASPAR yes 118399711
chr1 172727672 172727687 FOXP1 JASPAR yes 118399712
chr1 172727672 172727693 IRF1 JASPAR yes 118399713
chr1 172727673 172727688 FOXP1 JASPAR yes 118399714
chr1 172727673 172727694 IRF1 JASPAR yes 118399715
chr1 172727674 172727689 FOXP1 JASPAR yes 118399716
chr1 172727675 172727690 FOXP1 JASPAR yes 118399717
chr1 172727676 172727691 FOXP1 JASPAR yes 118399718
chr1 172727677 172727692 FOXP1 JASPAR yes 118399719
chr1 172727678 172727693 FOXP1 JASPAR yes 118399720
chr1 172727679 172727694 FOXP1 JASPAR yes 118399721
chr1 172727680 172727695 FOXP1 JASPAR yes 118399722
SNP sites on vista3906[chr1:172727569-172727695]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172727674 rs368411950 C CTTT,CTTTT,CTTTTTTTTT,CTTTTTTTTTTTTTTTTTTT
ETS2 FOXP1 IRF1 PRDM1 SPIC STAT1 STAT2
730875
Genes possibly regulated by vista3906[chr1:172727569-172727695]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 172628154 172636014 + FASLG ENSG00000117560.6 172628154 0.93 1.0 1574 585
Expression level of Genes
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miRNAs possibly regulated by vista3906[chr1:172727569-172727695]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results