EnhancerDB
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  3. vista3909[chr1:172788027-172788361]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3909[chr1:172788027-172788361]
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Tissue distribution of vista3909
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Transcription factor that possibly regulate vista3909[chr1:172788027-172788361]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172787914 172788230 EBF1 UCSC Txn Factor no Conserved 107846100
chr1 172787943 172788629 NFIC UCSC Txn Factor no Conserved 107846102
chr1 172787962 172788408 SPI1 UCSC Txn Factor no Conserved 107846106
chr1 172787966 172788437 RUNX3 UCSC Txn Factor no Conserved 107846108
chr1 172788029 172788426 FOXM1 UCSC Txn Factor no Conserved 107846117
chr1 172788031 172788710 ATF2 UCSC Txn Factor no Conserved 107846122
chr1 172788032 172788400 PAX5 UCSC Txn Factor no Conserved 107846124
chr1 172788128 172788351 BATF UCSC Txn Factor no Conserved 107846138
chr1 172788036 172788040 TEAD2 TRANSFAC yes 33153862
chr1 172788036 172788040 TEAD2 TRANSFAC yes 118399821
chr1 172788036 172788041 TBP TRANSFAC yes 33153863
chr1 172788036 172788041 TBP TRANSFAC yes 118399822
chr1 172788036 172788042 TFIID TRANSFAC yes 33153864
chr1 172788036 172788042 TFIID TRANSFAC yes 118399823
chr1 172788057 172788075 TP53 JASPAR yes 33153865
chr1 172788057 172788075 TP53 JASPAR yes 118399824
chr1 172788077 172788091 SPI1 JASPAR yes 33153866
chr1 172788077 172788091 SPI1 JASPAR yes 118399825
chr1 172788097 172788108 E2F6 JASPAR yes 33153867
chr1 172788097 172788108 E2F6 JASPAR yes 118399826
chr1 172788098 172788119 ZNF263 JASPAR yes 33153868
chr1 172788098 172788119 ZNF263 JASPAR yes 118399827
chr1 172788114 172788126 NHLH1 JASPAR yes 33153869
chr1 172788114 172788126 NHLH1 JASPAR yes 118399828
chr1 172788115 172788125 NHLH1 JASPAR yes 33153870
chr1 172788115 172788125 NHLH1 JASPAR yes 118399829
chr1 172788121 172788126 TFAP2A TRANSFAC yes 33153871
chr1 172788121 172788126 TFAP2A TRANSFAC yes 118399830
chr1 172788121 172788127 MZF1 JASPAR yes 33153872
chr1 172788121 172788127 MZF1 JASPAR yes 118399831
chr1 172788123 172788129 MAZ TRANSFAC yes 33153873
chr1 172788123 172788129 MAZ TRANSFAC yes 118399832
chr1 172788143 172788157 IRF7 JASPAR yes 33153874
chr1 172788143 172788157 IRF7 JASPAR yes 118399833
chr1 172788145 172788160 FOXP1 JASPAR yes 33153875
chr1 172788145 172788160 FOXP1 JASPAR yes 118399834
chr1 172788146 172788155 SRY JASPAR yes 33153876
chr1 172788146 172788155 SRY JASPAR yes 118399835
chr1 172788146 172788157 FOXP2 JASPAR yes 33153877
chr1 172788146 172788157 FOXP2 JASPAR yes 118399836
chr1 172788148 172788159 FOXA1 JASPAR yes 33153878
chr1 172788148 172788159 FOXA1 JASPAR yes 118399837
chr1 172788160 172788164 YY1 TRANSFAC yes 33153879
chr1 172788160 172788164 YY1 TRANSFAC yes 118399838
chr1 172788164 172788176 FOXI1 JASPAR yes 33153880
chr1 172788164 172788176 FOXI1 JASPAR yes 118399839
chr1 172788167 172788171 YY1 TRANSFAC yes 33153881
chr1 172788167 172788171 YY1 TRANSFAC yes 118399840
chr1 172788174 172788185 NFE2L2 JASPAR yes 33153882
chr1 172788174 172788185 NFE2L2 JASPAR yes 118399841
chr1 172788191 172788196 SP1 TRANSFAC yes 33153883
chr1 172788191 172788196 SP1 TRANSFAC yes 118399842
chr1 172788192 172788202 ZNF740 JASPAR yes 33153884
chr1 172788192 172788202 ZNF740 JASPAR yes 118399843
chr1 172788198 172788209 TBX2 JASPAR yes 33153885
chr1 172788198 172788209 TBX2 JASPAR yes 118399844
chr1 172788199 172788207 TBX15 JASPAR yes 33153886
chr1 172788199 172788207 TBX1 JASPAR yes 33153887
chr1 172788199 172788207 TBX4 JASPAR yes 33153888
chr1 172788199 172788207 TBX5 JASPAR yes 33153889
chr1 172788199 172788207 TBX15 JASPAR yes 118399845
chr1 172788199 172788207 TBX1 JASPAR yes 118399846
chr1 172788199 172788207 TBX4 JASPAR yes 118399847
chr1 172788199 172788207 TBX5 JASPAR yes 118399848
chr1 172788218 172788228 MZF1 JASPAR yes 33153890
chr1 172788218 172788228 MZF1 JASPAR yes 118399849
chr1 172788230 172788246 SOX4 JASPAR yes 33153891
chr1 172788230 172788246 SOX4 JASPAR yes 118399850
chr1 172788250 172788261 FOS JASPAR yes 33153892
chr1 172788250 172788261 FOSL1 JASPAR yes 33153893
chr1 172788250 172788261 JUND JASPAR yes 33153894
chr1 172788250 172788261 FOS JASPAR yes 118399851
chr1 172788250 172788261 FOSL1 JASPAR yes 118399852
chr1 172788250 172788261 JUND JASPAR yes 118399853
chr1 172788251 172788260 JDP2 JASPAR yes 33153895
chr1 172788251 172788260 JDP2 JASPAR yes 118399854
chr1 172788251 172788262 FOSL2 JASPAR yes 33153896
chr1 172788251 172788262 JUNB JASPAR yes 33153897
chr1 172788251 172788262 FOSL2 JASPAR yes 118399855
chr1 172788251 172788262 JUNB JASPAR yes 118399856
chr1 172788251 172788265 JUN JASPAR yes 33153898
chr1 172788251 172788265 JUN JASPAR yes 118399857
chr1 172788252 172788263 BATF JASPAR yes 33153899
chr1 172788252 172788263 BATF JASPAR yes 118399858
chr1 172788265 172788285 PPARG JASPAR yes 33153900
chr1 172788265 172788285 PPARG JASPAR yes 118399859
chr1 172788282 172788296 STAT1 JASPAR yes 33153901
chr1 172788282 172788296 STAT1 JASPAR yes 118399860
chr1 172788283 172788295 IRF1 JASPAR yes 33153902
chr1 172788283 172788295 IRF1 JASPAR yes 118399861
chr1 172788288 172788298 ETV6 JASPAR yes 33153903
chr1 172788288 172788298 ETV6 JASPAR yes 118399862
chr1 172788288 172788302 SPI1 JASPAR yes 33153904
chr1 172788288 172788302 SPI1 JASPAR yes 118399863
chr1 172788297 172788301 YY1 TRANSFAC yes 33153905
chr1 172788297 172788301 YY1 TRANSFAC yes 118399864
SNP sites on vista3909[chr1:172788027-172788361]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172788069 rs76504288 A C
ATF2 EBF1 FOXM1 NFIC PAX5 RUNX3 SPI1 TP53
731071
chr1 172788230 rs188454007 A T
ATF2 BATF EBF1 FOXM1 NFIC PAX5 RUNX3 SOX4 SPI1
731072
chr1 172788320 rs79577699 G A
ATF2 BATF FOXM1 NFIC PAX5 RUNX3 SPI1
731073
Genes possibly regulated by vista3909[chr1:172788027-172788361]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista3909[chr1:172788027-172788361]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results