EnhancerDB
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  3. vista391[chr1:12233600-12234159]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista391[chr1:12233600-12234159]
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Tissue distribution of vista391
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Transcription factor that possibly regulate vista391[chr1:12233600-12234159]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12233618 12233633 PRDM1 JASPAR yes 26805981
chr1 12233618 12233633 PRDM1 JASPAR yes 118232085
chr1 12233625 12233635 SP1 JASPAR yes 26805982
chr1 12233625 12233635 SP1 JASPAR yes 118232086
chr1 12233630 12233636 MZF1 JASPAR yes 26805983
chr1 12233630 12233636 MZF1 JASPAR yes 118232087
chr1 12233642 12233653 NFKB1 JASPAR yes 26805984
chr1 12233642 12233653 NFKB1 JASPAR yes 118232088
chr1 12233678 12233695 BCL6B JASPAR yes 26805985
chr1 12233678 12233695 BCL6B JASPAR yes 118232089
chr1 12233680 12233684 NFE TRANSFAC yes 26805986
chr1 12233680 12233684 NFE TRANSFAC yes 118232090
chr1 12233689 12233702 SCRT2 JASPAR yes 26805987
chr1 12233689 12233702 SCRT2 JASPAR yes 118232091
chr1 12233698 12233709 STAT1 JASPAR yes 26805988
chr1 12233698 12233709 STAT1 JASPAR yes 118232092
chr1 12233702 12233707 ETS2 TRANSFAC yes 26805989
chr1 12233702 12233707 ETS2 TRANSFAC yes 118232093
chr1 12233715 12233726 FLI1 JASPAR yes 26805990
chr1 12233715 12233726 FLI1 JASPAR yes 118232094
chr1 12233716 12233724 EHF JASPAR yes 26805991
chr1 12233716 12233724 EHF JASPAR yes 118232095
chr1 12233726 12233741 STAT1 JASPAR yes 26805992
chr1 12233726 12233741 STAT1 JASPAR yes 118232096
chr1 12233728 12233739 STAT1 JASPAR yes 26805993
chr1 12233728 12233739 STAT3 JASPAR yes 26805994
chr1 12233728 12233739 STAT1 JASPAR yes 118232097
chr1 12233728 12233739 STAT3 JASPAR yes 118232098
chr1 12233744 12233750 SOX10 JASPAR yes 26805995
chr1 12233744 12233750 SOX10 JASPAR yes 118232099
chr1 12233761 12233781 ESR1 JASPAR yes 26805996
chr1 12233761 12233781 ESR1 JASPAR yes 118232100
chr1 12233765 12233782 ESR1 JASPAR yes 26805997
chr1 12233765 12233782 ESR1 JASPAR yes 118232101
chr1 12233765 12233783 ESR1 JASPAR yes 26805998
chr1 12233765 12233783 ESR2 JASPAR yes 26805999
chr1 12233765 12233783 ESR1 JASPAR yes 118232102
chr1 12233765 12233783 ESR2 JASPAR yes 118232103
chr1 12233766 12233781 ESR2 JASPAR yes 26806000
chr1 12233766 12233781 ESR2 JASPAR yes 118232104
chr1 12233792 12233798 NFE2 TRANSFAC yes 26806001
chr1 12233792 12233798 NFE2 TRANSFAC yes 118232105
chr1 12233793 12233805 INSM1 JASPAR yes 26806002
chr1 12233793 12233805 INSM1 JASPAR yes 118232106
chr1 12233804 12233819 TFAP2A JASPAR yes 26806003
chr1 12233804 12233819 TFAP2C JASPAR yes 26806004
chr1 12233804 12233819 TFAP2A JASPAR yes 118232107
chr1 12233804 12233819 TFAP2C JASPAR yes 118232108
chr1 12233805 12233816 TFAP2A JASPAR yes 26806005
chr1 12233805 12233816 TFAP2A JASPAR yes 118232109
chr1 12233806 12233815 TFAP2A JASPAR yes 26806006
chr1 12233806 12233815 TFAP2A JASPAR yes 118232110
chr1 12233818 12233833 ESR2 JASPAR yes 26806007
chr1 12233818 12233833 ESR2 JASPAR yes 118232111
chr1 12233840 12233861 REST JASPAR yes 26806008
chr1 12233840 12233861 REST JASPAR yes 118232112
chr1 12233878 12233895 RARA JASPAR yes 26806009
chr1 12233878 12233895 RARA JASPAR yes 118232113
chr1 12233901 12233911 NFATC3 JASPAR yes 26806010
chr1 12233901 12233911 NFATC3 JASPAR yes 118232114
chr1 12233902 12233909 NFATC2 JASPAR yes 26806011
chr1 12233902 12233909 NFATC2 JASPAR yes 118232115
chr1 12233917 12233932 JUND JASPAR yes 26806012
chr1 12233917 12233932 JUND JASPAR yes 118232116
chr1 12233918 12233931 JUN JASPAR yes 26806013
chr1 12233918 12233931 JUN JASPAR yes 118232117
chr1 12233919 12233933 ATF7 JASPAR yes 26806014
chr1 12233919 12233933 BATF3 JASPAR yes 26806015
chr1 12233919 12233933 ATF7 JASPAR yes 118232118
chr1 12233919 12233933 BATF3 JASPAR yes 118232119
chr1 12233920 12233932 JDP2 JASPAR yes 26806016
chr1 12233920 12233932 JDP2 JASPAR yes 118232120
chr1 12233924 12233939 SCRT1 JASPAR yes 26806017
chr1 12233924 12233939 SCRT1 JASPAR yes 118232121
chr1 12233927 12233939 PKNOX1 JASPAR yes 26806018
chr1 12233927 12233939 PKNOX2 JASPAR yes 26806019
chr1 12233927 12233939 TGIF1 JASPAR yes 26806020
chr1 12233927 12233939 PKNOX1 JASPAR yes 118232122
chr1 12233927 12233939 PKNOX2 JASPAR yes 118232123
chr1 12233927 12233939 TGIF1 JASPAR yes 118232124
chr1 12233928 12233937 SNAI2 JASPAR yes 26806021
chr1 12233928 12233937 SNAI2 JASPAR yes 118232125
chr1 12233935 12233950 JUND JASPAR yes 26806022
chr1 12233935 12233950 JUND JASPAR yes 118232126
chr1 12233936 12233949 JUN JASPAR yes 26806023
chr1 12233936 12233949 JUN JASPAR yes 118232127
chr1 12233937 12233951 ATF7 JASPAR yes 26806024
chr1 12233937 12233951 ATF7 JASPAR yes 118232128
chr1 12233938 12233950 JDP2 JASPAR yes 26806025
chr1 12233938 12233950 JDP2 JASPAR yes 118232129
chr1 12233938 12233953 JUND JASPAR yes 26806026
chr1 12233938 12233953 JUND JASPAR yes 118232130
chr1 12233943 12233958 RUNX2 JASPAR yes 26806027
chr1 12233943 12233958 RUNX2 JASPAR yes 118232131
chr1 12233946 12233957 RUNX1 JASPAR yes 26806028
chr1 12233946 12233957 RUNX1 JASPAR yes 118232132
chr1 12233947 12233957 RUNX3 JASPAR yes 26806029
chr1 12233947 12233957 RUNX3 JASPAR yes 118232133
chr1 12233948 12233957 RUNX2 JASPAR yes 26806030
chr1 12233948 12233957 RUNX2 JASPAR yes 118232134
chr1 12233979 12233992 ELF1 JASPAR yes 26806031
chr1 12233979 12233992 ELF1 JASPAR yes 118232135
chr1 12233980 12233992 EHF JASPAR yes 26806032
chr1 12233980 12233992 EHF JASPAR yes 118232136
chr1 12233980 12233993 ELF3 JASPAR yes 26806033
chr1 12233980 12233993 ELF3 JASPAR yes 118232137
chr1 12233981 12233992 ELF5 JASPAR yes 26806034
chr1 12233981 12233992 ELF5 JASPAR yes 118232138
chr1 12233982 12233988 PEA3 TRANSFAC yes 26806035
chr1 12233982 12233988 PEA3 TRANSFAC yes 118232139
chr1 12233982 12233992 ETV6 JASPAR yes 26806036
chr1 12233982 12233992 ETV6 JASPAR yes 118232140
chr1 12233982 12233993 FLI1 JASPAR yes 26806037
chr1 12233982 12233993 FLI1 JASPAR yes 118232141
chr1 12233983 12233991 EHF JASPAR yes 26806038
chr1 12233983 12233991 EHF JASPAR yes 118232142
chr1 12233984 12233991 SPI1 JASPAR yes 26806039
chr1 12233984 12233991 SPI1 JASPAR yes 118232143
chr1 12234003 12234013 ZNF740 JASPAR yes 26806040
chr1 12234003 12234013 ZNF740 JASPAR yes 118232144
chr1 12234025 12234040 NR2C2 JASPAR yes 26806041
chr1 12234025 12234040 NR2C2 JASPAR yes 118232145
chr1 12234031 12234037 NFE2 TRANSFAC yes 26806042
chr1 12234031 12234037 NFE2 TRANSFAC yes 118232146
chr1 12234032 12234043 TFAP2A JASPAR yes 26806043
chr1 12234032 12234043 TFAP2A JASPAR yes 118232147
chr1 12234061 12234082 ZNF263 JASPAR yes 26806044
chr1 12234061 12234082 ZNF263 JASPAR yes 118232148
chr1 12234067 12234077 ZNF740 JASPAR yes 26806045
chr1 12234067 12234077 ZNF740 JASPAR yes 118232149
chr1 12234071 12234081 SP1 JASPAR yes 26806046
chr1 12234071 12234081 SP1 JASPAR yes 118232150
chr1 12234072 12234082 SP1 JASPAR yes 26806047
chr1 12234072 12234082 SP1 JASPAR yes 118232151
chr1 12234074 12234080 MAZ TRANSFAC yes 26806048
chr1 12234074 12234080 MAZ TRANSFAC yes 118232152
chr1 12234110 12234121 ESRRA JASPAR yes 26806049
chr1 12234110 12234121 ESRRA JASPAR yes 118232153
chr1 12234128 12234132 NFE TRANSFAC yes 26806050
chr1 12234128 12234132 NFE TRANSFAC yes 118232154
SNP sites on vista391[chr1:12233600-12234159]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12233675 rs541185628 A G no 84468
chr1 12233682 rs561151414 T A
BCL6B NFE
84469
chr1 12233754 rs976881 T C no 84470
chr1 12234074 rs976880 G A
MAZ SP1 ZNF263 ZNF740
84471
Genes possibly regulated by vista391[chr1:12233600-12234159]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12227060 12269285 + TNFRSF1B ENSG00000028137.12 12227060 0.88 0.96 167 93460
chr1 12290124 12572099 + VPS13D ENSG00000048707.9 12290124 0.64 1.0 168 44035
Expression level of Genes
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miRNAs possibly regulated by vista391[chr1:12233600-12234159]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results