EnhancerDB
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  3. vista392[chr1:12235070-12235463]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista392[chr1:12235070-12235463]
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Tissue distribution of vista392
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Transcription factor that possibly regulate vista392[chr1:12235070-12235463]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12235118 12235139 ZNF263 JASPAR yes 26806191
chr1 12235118 12235139 ZNF263 JASPAR yes 118232155
chr1 12235126 12235137 E2F1 JASPAR yes 26806192
chr1 12235126 12235137 E2F1 JASPAR yes 118232156
chr1 12235127 12235138 E2F4 JASPAR yes 26806193
chr1 12235127 12235138 E2F6 JASPAR yes 26806194
chr1 12235127 12235138 E2F4 JASPAR yes 118232157
chr1 12235127 12235138 E2F6 JASPAR yes 118232158
chr1 12235131 12235137 MAZ TRANSFAC yes 26806195
chr1 12235131 12235137 MAZ TRANSFAC yes 118232159
chr1 12235149 12235154 SP1 TRANSFAC yes 26806196
chr1 12235149 12235154 SP1 TRANSFAC yes 118232160
chr1 12235150 12235155 SP1 TRANSFAC yes 26806197
chr1 12235150 12235155 SP1 TRANSFAC yes 118232161
chr1 12235155 12235170 RFX5 JASPAR yes 26806198
chr1 12235155 12235170 RFX5 JASPAR yes 118232162
chr1 12235157 12235178 ZNF263 JASPAR yes 26806199
chr1 12235157 12235178 ZNF263 JASPAR yes 118232163
chr1 12235165 12235171 MAZ TRANSFAC yes 26806200
chr1 12235165 12235171 MAZ TRANSFAC yes 118232164
chr1 12235165 12235175 SP1 JASPAR yes 26806201
chr1 12235165 12235175 SP1 JASPAR yes 118232165
chr1 12235166 12235176 MZF1 JASPAR yes 26806202
chr1 12235166 12235176 MZF1 JASPAR yes 118232166
chr1 12235182 12235188 ETS1 JASPAR yes 26806203
chr1 12235182 12235188 SPI1 JASPAR yes 26806204
chr1 12235182 12235188 ETS1 JASPAR yes 118232167
chr1 12235182 12235188 SPI1 JASPAR yes 118232168
chr1 12235190 12235194 NFE TRANSFAC yes 26806205
chr1 12235190 12235194 NFE TRANSFAC yes 118232169
chr1 12235191 12235203 INSM1 JASPAR yes 26806206
chr1 12235191 12235203 INSM1 JASPAR yes 118232170
chr1 12235191 12235206 ZIC3 JASPAR yes 26806207
chr1 12235191 12235206 ZIC4 JASPAR yes 26806208
chr1 12235191 12235206 ZIC3 JASPAR yes 118232171
chr1 12235191 12235206 ZIC4 JASPAR yes 118232172
chr1 12235192 12235206 ZIC1 JASPAR yes 26806209
chr1 12235192 12235206 ZIC1 JASPAR yes 118232173
chr1 12235194 12235205 E2F4 JASPAR yes 26806210
chr1 12235194 12235205 E2F4 JASPAR yes 118232174
chr1 12235219 12235240 REST JASPAR yes 26806211
chr1 12235219 12235240 REST JASPAR yes 118232175
chr1 12235220 12235239 REST JASPAR yes 26806212
chr1 12235220 12235239 REST JASPAR yes 118232176
chr1 12235227 12235242 HNF4G JASPAR yes 26806213
chr1 12235227 12235242 HNF4G JASPAR yes 118232177
chr1 12235228 12235243 HNF4A JASPAR yes 26806214
chr1 12235228 12235243 HNF4A JASPAR yes 118232178
chr1 12235229 12235244 TFAP2A JASPAR yes 26806215
chr1 12235229 12235244 TFAP2C JASPAR yes 26806216
chr1 12235229 12235244 TFAP2A JASPAR yes 118232179
chr1 12235229 12235244 TFAP2C JASPAR yes 118232180
chr1 12235247 12235257 SP1 JASPAR yes 26806217
chr1 12235247 12235257 SP1 JASPAR yes 118232181
chr1 12235248 12235257 SP1 TRANSFAC yes 26806218
chr1 12235248 12235257 SP1 TRANSFAC yes 118232182
chr1 12235249 12235254 SP1 TRANSFAC yes 26806219
chr1 12235249 12235254 SP1 TRANSFAC yes 118232183
chr1 12235250 12235255 SP1 TRANSFAC yes 26806220
chr1 12235250 12235255 SP1 TRANSFAC yes 118232184
chr1 12235250 12235256 SP1 TRANSFAC yes 26806221
chr1 12235250 12235256 SP1 TRANSFAC yes 118232185
chr1 12235253 12235258 SP1 TRANSFAC yes 26806222
chr1 12235253 12235258 SP1 TRANSFAC yes 118232186
chr1 12235254 12235269 TFAP2A JASPAR yes 26806223
chr1 12235254 12235269 TFAP2C JASPAR yes 26806224
chr1 12235254 12235269 TFAP2A JASPAR yes 118232187
chr1 12235254 12235269 TFAP2C JASPAR yes 118232188
chr1 12235255 12235266 TFAP2A JASPAR yes 26806225
chr1 12235255 12235266 TFAP2B JASPAR yes 26806226
chr1 12235255 12235266 TFAP2C JASPAR yes 26806227
chr1 12235255 12235266 TFAP2A JASPAR yes 118232189
chr1 12235255 12235266 TFAP2B JASPAR yes 118232190
chr1 12235255 12235266 TFAP2C JASPAR yes 118232191
chr1 12235255 12235267 INSM1 JASPAR yes 26806228
chr1 12235255 12235267 INSM1 JASPAR yes 118232192
chr1 12235256 12235265 TFAP2A JASPAR yes 26806229
chr1 12235256 12235265 TFAP2A JASPAR yes 118232193
chr1 12235260 12235270 SP1 JASPAR yes 26806230
chr1 12235260 12235270 SP1 JASPAR yes 118232194
chr1 12235269 12235281 INSM1 JASPAR yes 26806231
chr1 12235269 12235281 INSM1 JASPAR yes 118232195
chr1 12235304 12235315 ELK4 JASPAR yes 26806232
chr1 12235304 12235315 ELK4 JASPAR yes 118232196
chr1 12235304 12235317 ELF3 JASPAR yes 26806233
chr1 12235304 12235317 ELF3 JASPAR yes 118232197
chr1 12235305 12235315 ELK1 JASPAR yes 26806234
chr1 12235305 12235315 ELK3 JASPAR yes 26806235
chr1 12235305 12235315 ETV6 JASPAR yes 26806236
chr1 12235305 12235315 ELK1 JASPAR yes 118232198
chr1 12235305 12235315 ELK3 JASPAR yes 118232199
chr1 12235305 12235315 ETV6 JASPAR yes 118232200
chr1 12235305 12235316 ELF5 JASPAR yes 26806237
chr1 12235305 12235316 SPDEF JASPAR yes 26806238
chr1 12235305 12235316 ELF5 JASPAR yes 118232201
chr1 12235305 12235316 SPDEF JASPAR yes 118232202
chr1 12235305 12235317 EHF JASPAR yes 26806239
chr1 12235305 12235317 ELF1 JASPAR yes 26806240
chr1 12235305 12235317 ELF4 JASPAR yes 26806241
chr1 12235305 12235317 EHF JASPAR yes 118232203
chr1 12235305 12235317 ELF1 JASPAR yes 118232204
chr1 12235305 12235317 ELF4 JASPAR yes 118232205
chr1 12235306 12235315 ELK4 JASPAR yes 26806242
chr1 12235306 12235315 ELK4 JASPAR yes 118232206
chr1 12235307 12235313 ETS1 JASPAR yes 26806243
chr1 12235307 12235313 SPI1 JASPAR yes 26806244
chr1 12235307 12235313 ETS1 JASPAR yes 118232207
chr1 12235307 12235313 SPI1 JASPAR yes 118232208
chr1 12235324 12235328 H1TF2 TRANSFAC yes 26806245
chr1 12235324 12235328 NFE TRANSFAC yes 26806246
chr1 12235324 12235328 SRF TRANSFAC yes 26806247
chr1 12235324 12235328 H1TF2 TRANSFAC yes 118232209
chr1 12235324 12235328 NFE TRANSFAC yes 118232210
chr1 12235324 12235328 SRF TRANSFAC yes 118232211
chr1 12235328 12235349 ZNF263 JASPAR yes 26806248
chr1 12235328 12235349 ZNF263 JASPAR yes 118232212
chr1 12235330 12235344 SPI1 JASPAR yes 26806249
chr1 12235330 12235344 SPI1 JASPAR yes 118232213
chr1 12235343 12235360 RARA JASPAR yes 26806250
chr1 12235343 12235360 RARA JASPAR yes 118232214
chr1 12235357 12235367 TFAP4 JASPAR yes 26806251
chr1 12235357 12235367 TFAP4 JASPAR yes 118232215
chr1 12235361 12235369 MEIS2 JASPAR yes 26806252
chr1 12235361 12235369 MEIS3 JASPAR yes 26806253
chr1 12235361 12235369 MEIS2 JASPAR yes 118232216
chr1 12235361 12235369 MEIS3 JASPAR yes 118232217
chr1 12235362 12235366 NFE TRANSFAC yes 26806254
chr1 12235362 12235366 NFE TRANSFAC yes 118232218
chr1 12235386 12235401 RFX5 JASPAR yes 26806255
chr1 12235386 12235401 RFX5 JASPAR yes 118232219
chr1 12235392 12235396 H4TF2 TRANSFAC yes 26806256
chr1 12235392 12235396 H4TF2 TRANSFAC yes 118232220
chr1 12235410 12235422 TFAP2C JASPAR yes 26806257
chr1 12235410 12235422 TFAP2C JASPAR yes 118232221
chr1 12235417 12235421 LFA1 TRANSFAC yes 26806258
chr1 12235417 12235421 LFA1 TRANSFAC yes 118232222
chr1 12235417 12235429 INSM1 JASPAR yes 26806259
chr1 12235417 12235429 INSM1 JASPAR yes 118232223
chr1 12235421 12235436 NR2C2 JASPAR yes 26806260
chr1 12235421 12235436 NR2C2 JASPAR yes 118232224
chr1 12235442 12235456 XBP1 JASPAR yes 26806261
chr1 12235442 12235456 XBP1 JASPAR yes 118232225
chr1 12235443 12235457 CREB3 JASPAR yes 26806262
chr1 12235443 12235457 CREB3L1 JASPAR yes 26806263
chr1 12235443 12235457 CREB3 JASPAR yes 118232226
chr1 12235443 12235457 CREB3L1 JASPAR yes 118232227
chr1 12235444 12235455 NFE2L2 JASPAR yes 26806264
chr1 12235444 12235455 NFE2L2 JASPAR yes 118232228
chr1 12235447 12235459 CREB1 JASPAR yes 26806265
chr1 12235447 12235459 CREB1 JASPAR yes 118232229
chr1 12235448 12235453 ATF1 TRANSFAC yes 26806266
chr1 12235448 12235453 ATF1 TRANSFAC yes 118232230
SNP sites on vista392[chr1:12235070-12235463]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12235150 rs187617811 A G
SP1
84491
chr1 12235171 rs5745967 G A,C,T
MAZ MZF1 SP1 ZNF263
84492
chr1 12235280 rs190651726 C T
INSM1
84493
chr1 12235317 rs180984255 G A
EHF ELF1 ELF3 ELF4
84494
chr1 12235319 rs5745968 A G no 84495
chr1 12235363 rs190278343 C A
MEIS2 MEIS3 NFE TFAP4
84496
chr1 12235431 rs5745969 A G
NR2C2
84497
chr1 12235448 rs113533746 C T
ATF1 CREB1 CREB3 CREB3L1 NFE2L2 XBP1
84498
chr1 12235456 rs5745971 C T
CREB1 CREB3 CREB3L1 XBP1
84499
Genes possibly regulated by vista392[chr1:12235070-12235463]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12227060 12269285 + TNFRSF1B ENSG00000028137.12 12227060 0.88 0.96 167 91990
chr1 12290124 12572099 + VPS13D ENSG00000048707.9 12290124 0.64 1.0 168 45339
Expression level of Genes
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miRNAs possibly regulated by vista392[chr1:12235070-12235463]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results