EnhancerDB
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  3. vista3941[chr1:173165720-173166046]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3941[chr1:173165720-173166046]
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Tissue distribution of vista3941
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Transcription factor that possibly regulate vista3941[chr1:173165720-173166046]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 173165726 173165744 NR3C1 JASPAR yes 118401410
chr1 173165735 173165750 RUNX2 JASPAR yes 118401411
chr1 173165738 173165749 RUNX1 JASPAR yes 118401412
chr1 173165739 173165749 RUNX3 JASPAR yes 118401413
chr1 173165740 173165749 RUNX2 JASPAR yes 118401414
chr1 173165745 173165755 HOXA13 JASPAR yes 118401415
chr1 173165745 173165755 HOXB13 JASPAR yes 118401416
chr1 173165745 173165755 HOXD13 JASPAR yes 118401417
chr1 173165745 173165756 HOXA10 JASPAR yes 118401418
chr1 173165746 173165755 CDX1 JASPAR yes 118401419
chr1 173165746 173165757 CDX2 JASPAR yes 118401420
chr1 173165758 173165769 PHOX2A JASPAR yes 118401421
chr1 173165758 173165769 PROP1 JASPAR yes 118401422
chr1 173165762 173165770 BARX1 JASPAR yes 118401423
chr1 173165780 173165794 EBF1 JASPAR yes 118401424
chr1 173165781 173165792 EBF1 JASPAR yes 118401425
chr1 173165782 173165793 EBF1 JASPAR yes 118401426
chr1 173165789 173165795 HiNF-A TRANSFAC yes 118401427
chr1 173165795 173165810 MEF2A JASPAR yes 118401428
chr1 173165796 173165811 MEF2C JASPAR yes 118401429
chr1 173165797 173165809 MEF2A JASPAR yes 118401430
chr1 173165797 173165809 MEF2B JASPAR yes 118401431
chr1 173165797 173165809 MEF2D JASPAR yes 118401432
chr1 173165798 173165808 MEF2A JASPAR yes 118401433
chr1 173165799 173165813 RORA JASPAR yes 118401434
chr1 173165801 173165805 YY1 TRANSFAC yes 118401435
chr1 173165803 173165817 FOXF2 JASPAR yes 118401436
chr1 173165803 173165818 FOXP1 JASPAR yes 118401437
chr1 173165804 173165815 FOXA1 JASPAR yes 118401438
chr1 173165804 173165819 FOXA1 JASPAR yes 118401439
chr1 173165805 173165816 FOXB1 JASPAR yes 118401440
chr1 173165805 173165816 FOXC1 JASPAR yes 118401441
chr1 173165805 173165817 FOXC2 JASPAR yes 118401442
chr1 173165806 173165817 FOXP2 JASPAR yes 118401443
chr1 173165807 173165815 FOXO3 JASPAR yes 118401444
chr1 173165808 173165815 FOXD2 JASPAR yes 118401445
chr1 173165808 173165815 FOXI1 JASPAR yes 118401446
chr1 173165808 173165815 FOXL1 JASPAR yes 118401447
chr1 173165808 173165815 FOXO4 JASPAR yes 118401448
chr1 173165808 173165815 FOXO6 JASPAR yes 118401449
chr1 173165808 173165815 FOXP3 JASPAR yes 118401450
chr1 173165808 173165816 FOXD1 JASPAR yes 118401451
chr1 173165808 173165816 FOXG1 JASPAR yes 118401452
chr1 173165808 173165816 FOXO3 JASPAR yes 118401453
chr1 173165808 173165817 SRY JASPAR yes 118401454
chr1 173165809 173165821 PBX1 JASPAR yes 118401455
chr1 173165828 173165839 DMRT3 JASPAR yes 118401456
chr1 173165832 173165837 GATA2 JASPAR yes 118401457
chr1 173165834 173165845 USF1 JASPAR yes 118401458
chr1 173165834 173165845 USF2 JASPAR yes 118401459
chr1 173165835 173165845 MAX JASPAR yes 118401460
chr1 173165857 173165875 RARA JASPAR yes 118401461
chr1 173165859 173165873 RORA JASPAR yes 118401462
chr1 173165893 173165898 ETS2 TRANSFAC yes 118401463
chr1 173165907 173165912 GATA1 TRANSFAC yes 118401464
chr1 173165909 173165927 IRF2 JASPAR yes 118401465
chr1 173165910 173165931 IRF1 JASPAR yes 118401466
chr1 173165912 173165927 STAT2 JASPAR yes 118401467
chr1 173165913 173165927 STAT1 JASPAR yes 118401468
chr1 173165919 173165929 SP1 JASPAR yes 118401469
chr1 173165932 173165946 SPIC JASPAR yes 118401470
chr1 173165941 173165956 AR JASPAR yes 118401471
chr1 173165979 173165983 YY1 TRANSFAC yes 118401472
chr1 173165979 173165994 STAT1 JASPAR yes 118401473
chr1 173165981 173165992 STAT1 JASPAR yes 118401474
chr1 173165994 173165998 NFE TRANSFAC yes 118401475
chr1 173165997 173166003 MZF1 JASPAR yes 118401476
chr1 173166005 173166021 NFYA JASPAR yes 118401477
chr1 173166007 173166019 PBX1 JASPAR yes 118401478
chr1 173166008 173166023 NFYB JASPAR yes 118401479
chr1 173166010 173166015 NFY TRANSFAC yes 118401480
chr1 173166011 173166021 HMBOX1 JASPAR yes 118401481
SNP sites on vista3941[chr1:173165720-173166046]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 173165838 rs140685475 A G
DMRT3 MAX USF1 USF2
733539
Genes possibly regulated by vista3941[chr1:173165720-173166046]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 173152873 173176452 - TNFSF4 ENSG00000117586.6 173176452 0.87 0.97 1576 89594
Expression level of Genes
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miRNAs possibly regulated by vista3941[chr1:173165720-173166046]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results