EnhancerDB
  1. Home
  2. Enhancers
  3. vista3950[chr1:173433461-173433670]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3950[chr1:173433461-173433670]
Back to top
Tissue distribution of vista3950
Back to top
Transcription factor that possibly regulate vista3950[chr1:173433461-173433670]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 173433461 173433471 SMAD3 JASPAR yes 118401873
chr1 173433515 173433520 GATA1 TRANSFAC yes 118401874
chr1 173433522 173433526 YY1 TRANSFAC yes 118401875
chr1 173433536 173433551 AR JASPAR yes 118401876
chr1 173433546 173433551 ETS2 TRANSFAC yes 118401877
chr1 173433551 173433555 TEAD2 TRANSFAC yes 118401878
chr1 173433551 173433556 TBP TRANSFAC yes 118401879
chr1 173433551 173433557 TMF TRANSFAC yes 118401880
chr1 173433557 173433563 NFIC JASPAR yes 118401881
chr1 173433568 173433578 MSC JASPAR yes 118401882
chr1 173433568 173433578 TFAP4 JASPAR yes 118401883
chr1 173433583 173433593 ID4 JASPAR yes 118401884
chr1 173433583 173433593 TCF3 JASPAR yes 118401885
chr1 173433583 173433593 TCF4 JASPAR yes 118401886
chr1 173433584 173433593 SNAI2 JASPAR yes 118401887
chr1 173433585 173433590 USF2 TRANSFAC yes 118401888
chr1 173433586 173433604 RARA JASPAR yes 118401889
chr1 173433593 173433606 NR2F1 JASPAR yes 118401890
chr1 173433611 173433623 TAL1 JASPAR yes 118401891
chr1 173433612 173433627 SCRT1 JASPAR yes 118401892
chr1 173433613 173433623 FIGLA JASPAR yes 118401893
chr1 173433613 173433623 MSC JASPAR yes 118401894
chr1 173433613 173433623 MYF6 JASPAR yes 118401895
chr1 173433613 173433623 TCF3 JASPAR yes 118401896
chr1 173433614 173433623 SNAI2 JASPAR yes 118401897
chr1 173433614 173433627 SCRT2 JASPAR yes 118401898
chr1 173433615 173433620 USF2 TRANSFAC yes 118401899
chr1 173433616 173433622 PTF TRANSFAC yes 118401900
chr1 173433637 173433641 H1TF2 TRANSFAC yes 118401901
chr1 173433637 173433641 NFE TRANSFAC yes 118401902
chr1 173433637 173433641 SRF TRANSFAC yes 118401903
chr1 173433637 173433647 HOXA13 JASPAR yes 118401904
chr1 173433637 173433647 HOXB13 JASPAR yes 118401905
chr1 173433637 173433647 HOXD13 JASPAR yes 118401906
chr1 173433637 173433649 MEF2D JASPAR yes 118401907
chr1 173433638 173433650 FOXI1 JASPAR yes 118401908
SNP sites on vista3950[chr1:173433461-173433670]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista3950[chr1:173433461-173433670]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 173446405 173457946 + PRDX6 ENSG00000117592.8 173446405 0.68 0.99 1577 87265
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3950[chr1:173433461-173433670]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results