EnhancerDB
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  3. vista3954[chr1:173909740-173909938]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3954[chr1:173909740-173909938]
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Tissue distribution of vista3954
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Transcription factor that possibly regulate vista3954[chr1:173909740-173909938]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 173909740 173909751 PROP1 JASPAR yes 118402045
chr1 173909745 173909749 YY1 TRANSFAC yes 118402046
chr1 173909765 173909780 FOXP1 JASPAR yes 118402047
chr1 173909765 173909786 IRF1 JASPAR yes 118402048
chr1 173909766 173909778 MEF2D JASPAR yes 118402049
chr1 173909766 173909787 IRF1 JASPAR yes 118402050
chr1 173909768 173909772 YY1 TRANSFAC yes 118402051
chr1 173909772 173909778 TCF4 TRANSFAC yes 118402052
chr1 173909772 173909787 FOXP1 JASPAR yes 118402053
chr1 173909772 173909793 IRF1 JASPAR yes 118402054
chr1 173909773 173909784 FOXP2 JASPAR yes 118402055
chr1 173909774 173909789 FOXP1 JASPAR yes 118402056
chr1 173909774 173909795 IRF1 JASPAR yes 118402057
chr1 173909778 173909799 IRF1 JASPAR yes 118402058
chr1 173909779 173909794 FOXP1 JASPAR yes 118402059
chr1 173909785 173909800 FOXP1 JASPAR yes 118402060
chr1 173909804 173909819 MEF2A JASPAR yes 118402061
chr1 173909805 173909820 MEF2C JASPAR yes 118402062
chr1 173909808 173909812 YY1 TRANSFAC yes 118402063
chr1 173909814 173909818 TEAD2 TRANSFAC yes 118402064
chr1 173909817 173909828 FOXB1 JASPAR yes 118402065
chr1 173909827 173909831 TEAD2 TRANSFAC yes 118402066
chr1 173909848 173909863 FOXP1 JASPAR yes 118402067
chr1 173909856 173909870 SPI1 JASPAR yes 118402068
chr1 173909856 173909870 SPIC JASPAR yes 118402069
chr1 173909862 173909867 ETS2 TRANSFAC yes 118402070
chr1 173909867 173909877 NFATC3 JASPAR yes 118402071
chr1 173909869 173909877 FOXO3 JASPAR yes 118402072
chr1 173909877 173909880 MYB TRANSFAC yes 118402073
chr1 173909889 173909894 ETS2 TRANSFAC yes 118402074
chr1 173909889 173909907 SRF JASPAR yes 118402075
chr1 173909892 173909898 LEF1 TRANSFAC yes 118402076
chr1 173909892 173909898 SOX10 JASPAR yes 118402077
chr1 173909905 173909908 MYB TRANSFAC yes 118402078
SNP sites on vista3954[chr1:173909740-173909938]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 173909784 rs11447877 C CT
FOXP1 FOXP2 IRF1
736107
Genes possibly regulated by vista3954[chr1:173909740-173909938]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 173837220 173872687 + ZBTB37 ENSG00000185278.10 173837220 0.77 0.99 1583 27480
chr1 173872947 173886516 - SERPINC1 ENSG00000117601.9 173886516 1.0 0.99 1584 76776
chr1 173900352 173991435 - RC3H1 ENSG00000135870.7 173991435 0.72 0.99 1585 18503
Expression level of Genes
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miRNAs possibly regulated by vista3954[chr1:173909740-173909938]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results