EnhancerDB
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  3. vista3962[chr1:174220636-174220943]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3962[chr1:174220636-174220943]
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Tissue distribution of vista3962
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Transcription factor that possibly regulate vista3962[chr1:174220636-174220943]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 174220637 174220645 GATA3 JASPAR yes 118402391
chr1 174220655 174220670 PRDM1 JASPAR yes 118402392
chr1 174220656 174220671 SOX21 JASPAR yes 118402393
chr1 174220659 174220664 MYB TRANSFAC yes 118402394
chr1 174220662 174220676 RORA JASPAR yes 118402395
chr1 174220665 174220675 RORA JASPAR yes 118402396
chr1 174220667 174220675 CREB1 JASPAR yes 118402397
chr1 174220669 174220686 RARA JASPAR yes 118402398
chr1 174220670 174220674 ESR1 TRANSFAC yes 118402399
chr1 174220672 174220685 POU2F2 JASPAR yes 118402400
chr1 174220693 174220697 YY1 TRANSFAC yes 118402401
chr1 174220696 174220710 IRF7 JASPAR yes 118402402
chr1 174220699 174220709 MEF2A JASPAR yes 118402403
chr1 174220707 174220715 GATA3 JASPAR yes 118402404
chr1 174220707 174220715 GATA5 JASPAR yes 118402405
chr1 174220718 174220728 OLIG2 JASPAR yes 118402406
chr1 174220718 174220728 OLIG3 JASPAR yes 118402407
chr1 174220722 174220726 YY1 TRANSFAC yes 118402408
chr1 174220729 174220743 ONECUT1 JASPAR yes 118402409
chr1 174220729 174220743 ONECUT2 JASPAR yes 118402410
chr1 174220729 174220743 ONECUT3 JASPAR yes 118402411
chr1 174220730 174220740 CUX1 JASPAR yes 118402412
chr1 174220730 174220740 CUX2 JASPAR yes 118402413
chr1 174220733 174220746 DUXA JASPAR yes 118402414
chr1 174220736 174220748 POU2F1 JASPAR yes 118402415
chr1 174220736 174220749 POU3F3 JASPAR yes 118402416
chr1 174220736 174220750 POU1F1 JASPAR yes 118402417
chr1 174220737 174220749 POU3F1 JASPAR yes 118402418
chr1 174220737 174220749 POU3F2 JASPAR yes 118402419
chr1 174220738 174220742 YY1 TRANSFAC yes 118402420
chr1 174220741 174220751 GSX2 JASPAR yes 118402421
chr1 174220743 174220753 PAX3 JASPAR yes 118402422
chr1 174220743 174220753 PAX7 JASPAR yes 118402423
chr1 174220747 174220757 PAX3 JASPAR yes 118402424
chr1 174220765 174220775 SMAD3 JASPAR yes 118402425
chr1 174220785 174220798 DUXA JASPAR yes 118402426
chr1 174220786 174220797 DUX4 JASPAR yes 118402427
chr1 174220790 174220793 MYB TRANSFAC yes 118402428
chr1 174220801 174220813 TEF JASPAR yes 118402429
chr1 174220807 174220812 GATA1 TRANSFAC yes 118402430
chr1 174220813 174220819 SOX10 JASPAR yes 118402431
chr1 174220823 174220838 FOXA1 JASPAR yes 118402432
chr1 174220824 174220830 TCF4 TRANSFAC yes 118402433
chr1 174220824 174220836 FOXI1 JASPAR yes 118402434
chr1 174220824 174220839 FOXP1 JASPAR yes 118402435
chr1 174220825 174220836 FOXP2 JASPAR yes 118402436
chr1 174220825 174220837 FOXC2 JASPAR yes 118402437
chr1 174220826 174220834 FOXG1 JASPAR yes 118402438
chr1 174220826 174220834 FOXO3 JASPAR yes 118402439
chr1 174220826 174220837 FOXB1 JASPAR yes 118402440
chr1 174220826 174220837 FOXC1 JASPAR yes 118402441
chr1 174220826 174220842 POU4F2 JASPAR yes 118402442
chr1 174220826 174220842 POU4F3 JASPAR yes 118402443
chr1 174220827 174220838 FOXA1 JASPAR yes 118402444
chr1 174220828 174220842 POU4F1 JASPAR yes 118402445
chr1 174220833 174220849 RFX4 JASPAR yes 118402446
chr1 174220840 174220851 DMRT3 JASPAR yes 118402447
chr1 174220842 174220847 GATA2 JASPAR yes 118402448
chr1 174220892 174220903 FLI1 JASPAR yes 118402449
chr1 174220893 174220903 GABPA JASPAR yes 118402450
chr1 174220893 174220906 ELF1 JASPAR yes 118402451
chr1 174220894 174220901 SPI1 JASPAR yes 118402452
chr1 174220894 174220902 FEV JASPAR yes 118402453
chr1 174220896 174220901 ETS2 TRANSFAC yes 118402454
chr1 174220899 174220905 TCF4 TRANSFAC yes 118402455
chr1 174220903 174220915 IRF1 JASPAR yes 118402456
chr1 174220909 174220914 H4TF1 TRANSFAC yes 118402457
SNP sites on vista3962[chr1:174220636-174220943]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 174220740 rs16846816 A G
CUX1 CUX2 DUXA ONECUT1 ONECUT2 ONECUT3 POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 YY1
737168
Genes possibly regulated by vista3962[chr1:174220636-174220943]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 174128548 174964445 + RABGAP1L ENSG00000152061.17 174128548 0.8 0.99 1586 7912
Expression level of Genes
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miRNAs possibly regulated by vista3962[chr1:174220636-174220943]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results