EnhancerDB
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  3. vista3968[chr1:174937322-174937525]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3968[chr1:174937322-174937525]
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Tissue distribution of vista3968
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Transcription factor that possibly regulate vista3968[chr1:174937322-174937525]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 174937334 174937338 NFE TRANSFAC yes 33264687
chr1 174937334 174937338 NFE TRANSFAC yes 118402650
chr1 174937334 174937339 GATA1 TRANSFAC yes 33264688
chr1 174937334 174937339 GATA1 TRANSFAC yes 118402651
chr1 174937334 174937340 GATA3 JASPAR yes 33264689
chr1 174937334 174937340 GATA3 JASPAR yes 118402652
chr1 174937345 174937355 NEUROG2 JASPAR yes 33264690
chr1 174937345 174937355 NEUROG2 JASPAR yes 118402653
chr1 174937351 174937355 YY1 TRANSFAC yes 33264691
chr1 174937351 174937355 YY1 TRANSFAC yes 118402654
chr1 174937353 174937374 IRF1 JASPAR yes 33264692
chr1 174937353 174937374 IRF1 JASPAR yes 118402655
chr1 174937378 174937384 SOX10 JASPAR yes 33264693
chr1 174937378 174937384 SOX10 JASPAR yes 118402656
chr1 174937433 174937447 SPI1 JASPAR yes 33264694
chr1 174937433 174937447 SPIC JASPAR yes 33264695
chr1 174937433 174937447 SPI1 JASPAR yes 118402657
chr1 174937433 174937447 SPIC JASPAR yes 118402658
chr1 174937437 174937447 GABPA JASPAR yes 33264696
chr1 174937437 174937447 GABPA JASPAR yes 118402659
chr1 174937438 174937446 EHF JASPAR yes 33264697
chr1 174937438 174937446 EHF JASPAR yes 118402660
chr1 174937454 174937458 YY1 TRANSFAC yes 33264698
chr1 174937454 174937458 YY1 TRANSFAC yes 118402661
chr1 174937460 174937471 ETV2 JASPAR yes 33264699
chr1 174937460 174937471 ETV2 JASPAR yes 118402662
chr1 174937466 174937470 NFE TRANSFAC yes 33264700
chr1 174937466 174937470 NFE TRANSFAC yes 118402663
chr1 174937490 174937494 TEAD2 TRANSFAC yes 33264701
chr1 174937490 174937494 TEAD2 TRANSFAC yes 118402664
chr1 174937492 174937495 MYB TRANSFAC yes 33264702
chr1 174937492 174937495 MYB TRANSFAC yes 118402665
chr1 174937499 174937502 MYB TRANSFAC yes 33264703
chr1 174937499 174937502 MYB TRANSFAC yes 118402666
chr1 174937507 174937525 MAFF JASPAR yes 33264704
chr1 174937507 174937525 MAFF JASPAR yes 118402667
chr1 174937521 174937532 DMRT3 JASPAR yes 33264705
chr1 174937521 174937532 DMRT3 JASPAR yes 118402668
SNP sites on vista3968[chr1:174937322-174937525]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 174937342 rs192610667 C T no 739685
chr1 174937352 rs12072529 T C
NEUROG2 YY1
739686
chr1 174937440 rs141294899 A G
EHF GABPA SPI1 SPIC
739687
chr1 174937496 rs183723531 C T no 739688
chr1 174937517 rs76777839 G T
MAFF
739689
Genes possibly regulated by vista3968[chr1:174937322-174937525]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 174968300 174980851 + CACYBP ENSG00000116161.13 174968300 0.9 0.98 1588 69225
chr1 174979925 174992561 - MRPS14 ENSG00000120333.4 174992561 0.75 0.99 1589 44964
chr1 175036994 175117202 + TNN ENSG00000120332.11 175036994 0.96 0.99 1590 531
Expression level of Genes
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miRNAs possibly regulated by vista3968[chr1:174937322-174937525]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results