EnhancerDB
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  3. vista3971[chr1:175094142-175094504]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3971[chr1:175094142-175094504]
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Tissue distribution of vista3971
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Transcription factor that possibly regulate vista3971[chr1:175094142-175094504]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 175094442 175094784 CTCF UCSC Txn Factor no Conserved 107847038
chr1 175094458 175094739 SMC3 UCSC Txn Factor no Conserved 107847044
chr1 175094465 175094734 RAD21 UCSC Txn Factor no Conserved 107847047
chr1 175094169 175094184 MEF2C JASPAR yes 118402746
chr1 175094170 175094185 MEF2A JASPAR yes 118402747
chr1 175094197 175094208 CEBPA JASPAR yes 118402748
chr1 175094197 175094209 HLF JASPAR yes 118402749
chr1 175094198 175094208 CEBPB JASPAR yes 118402750
chr1 175094198 175094208 CEBPD JASPAR yes 118402751
chr1 175094198 175094208 CEBPE JASPAR yes 118402752
chr1 175094198 175094209 CEBPB JASPAR yes 118402753
chr1 175094203 175094217 SPIC JASPAR yes 118402754
chr1 175094204 175094217 ELF1 JASPAR yes 118402755
chr1 175094205 175094217 EHF JASPAR yes 118402756
chr1 175094206 175094217 ELF5 JASPAR yes 118402757
chr1 175094208 175094216 FEV JASPAR yes 118402758
chr1 175094210 175094220 RELA JASPAR yes 118402759
chr1 175094250 175094263 ZBTB18 JASPAR yes 118402760
chr1 175094251 175094263 PKNOX2 JASPAR yes 118402761
chr1 175094252 175094262 NEUROG2 JASPAR yes 118402762
chr1 175094252 175094264 TAL1 JASPAR yes 118402763
chr1 175094269 175094283 STAT1 JASPAR yes 118402764
chr1 175094270 175094282 IRF1 JASPAR yes 118402765
chr1 175094294 175094308 IRF7 JASPAR yes 118402766
chr1 175094296 175094308 IRF1 JASPAR yes 118402767
chr1 175094329 175094342 SCRT2 JASPAR yes 118402768
chr1 175094331 175094343 TAL1 JASPAR yes 118402769
chr1 175094332 175094344 PKNOX2 JASPAR yes 118402770
chr1 175094332 175094345 ZBTB18 JASPAR yes 118402771
chr1 175094333 175094343 FIGLA JASPAR yes 118402772
chr1 175094333 175094343 MSC JASPAR yes 118402773
chr1 175094333 175094343 MYF6 JASPAR yes 118402774
chr1 175094333 175094343 TFAP4 JASPAR yes 118402775
chr1 175094333 175094345 TAL1 JASPAR yes 118402776
chr1 175094338 175094342 NFE TRANSFAC yes 118402777
chr1 175094344 175094349 H4TF1 TRANSFAC yes 118402778
chr1 175094373 175094383 TFAP4 JASPAR yes 118402779
chr1 175094407 175094419 PROX1 JASPAR yes 118402780
chr1 175094416 175094427 STAT3 JASPAR yes 118402781
chr1 175094421 175094426 ETS2 TRANSFAC yes 118402782
chr1 175094425 175094440 HNF1A JASPAR yes 118402783
chr1 175094428 175094432 TEAD2 TRANSFAC yes 118402784
chr1 175094428 175094433 TBP TRANSFAC yes 118402785
chr1 175094428 175094434 TMF TRANSFAC yes 118402786
chr1 175094430 175094445 MEF2C JASPAR yes 118402787
chr1 175094431 175094443 POU3F1 JASPAR yes 118402788
chr1 175094431 175094443 POU3F2 JASPAR yes 118402789
chr1 175094431 175094444 POU3F3 JASPAR yes 118402790
chr1 175094432 175094444 POU2F1 JASPAR yes 118402791
chr1 175094440 175094443 MYB TRANSFAC yes 118402792
chr1 175094463 175094477 IRF7 JASPAR yes 118402793
chr1 175094464 175094479 PRDM1 JASPAR yes 118402794
chr1 175094464 175094482 NR3C1 JASPAR yes 118402795
chr1 175094472 175094485 POU3F3 JASPAR yes 118402796
chr1 175094473 175094483 NFATC3 JASPAR yes 118402797
SNP sites on vista3971[chr1:175094142-175094504]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 175094499 rs148596419 T TA
CTCF RAD21 SMC3
740032
Genes possibly regulated by vista3971[chr1:175094142-175094504]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 175036994 175117202 + TNN ENSG00000120332.11 175036994 0.96 0.99 1590 42852
chr1 175126123 175162135 - KIAA0040 ENSG00000235750.5 175162135 0.78 1.0 1591 32369
Expression level of Genes
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miRNAs possibly regulated by vista3971[chr1:175094142-175094504]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results