EnhancerDB
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  3. vista3976[chr1:175224481-175224839]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3976[chr1:175224481-175224839]
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Tissue distribution of vista3976
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Transcription factor that possibly regulate vista3976[chr1:175224481-175224839]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 175224473 175224488 FOXP1 JASPAR yes 33278489
chr1 175224473 175224488 FOXP1 JASPAR yes 118402975
chr1 175224474 175224489 FOXP1 JASPAR yes 33278490
chr1 175224474 175224489 FOXP1 JASPAR yes 118402976
chr1 175224475 175224490 FOXP1 JASPAR yes 33278491
chr1 175224475 175224490 FOXP1 JASPAR yes 118402977
chr1 175224476 175224491 FOXP1 JASPAR yes 33278492
chr1 175224476 175224491 FOXP1 JASPAR yes 118402978
chr1 175224477 175224492 FOXP1 JASPAR yes 33278493
chr1 175224477 175224492 FOXP1 JASPAR yes 118402979
chr1 175224497 175224516 PAX5 JASPAR yes 33278494
chr1 175224497 175224516 PAX5 JASPAR yes 118402980
chr1 175224501 175224512 NFE2L2 JASPAR yes 33278495
chr1 175224501 175224512 NFE2L2 JASPAR yes 118402981
chr1 175224505 175224509 NFE TRANSFAC yes 33278496
chr1 175224505 175224509 NFE TRANSFAC yes 118402982
chr1 175224539 175224556 ESR1 JASPAR yes 33278497
chr1 175224539 175224556 ESR1 JASPAR yes 118402983
chr1 175224549 175224561 HINFP JASPAR yes 33278498
chr1 175224549 175224561 HINFP JASPAR yes 118402984
chr1 175224553 175224561 SP1 TRANSFAC yes 33278499
chr1 175224553 175224561 SP1 TRANSFAC yes 118402985
chr1 175224553 175224563 SP1 JASPAR yes 33278500
chr1 175224553 175224563 SP1 JASPAR yes 118402986
chr1 175224612 175224632 TP63 JASPAR yes 33278501
chr1 175224612 175224632 TP63 JASPAR yes 118402987
chr1 175224613 175224631 TP73 JASPAR yes 33278502
chr1 175224613 175224631 TP73 JASPAR yes 118402988
chr1 175224623 175224642 PAX5 JASPAR yes 33278503
chr1 175224623 175224642 PAX5 JASPAR yes 118402989
chr1 175224640 175224655 MEF2A JASPAR yes 33278504
chr1 175224640 175224655 MEF2A JASPAR yes 118402990
chr1 175224641 175224656 MEF2C JASPAR yes 33278505
chr1 175224641 175224656 MEF2C JASPAR yes 118402991
chr1 175224642 175224654 MEF2A JASPAR yes 33278506
chr1 175224642 175224654 MEF2B JASPAR yes 33278507
chr1 175224642 175224654 MEF2D JASPAR yes 33278508
chr1 175224642 175224654 MEF2A JASPAR yes 118402992
chr1 175224642 175224654 MEF2B JASPAR yes 118402993
chr1 175224642 175224654 MEF2D JASPAR yes 118402994
chr1 175224644 175224648 YY1 TRANSFAC yes 33278509
chr1 175224644 175224648 YY1 TRANSFAC yes 118402995
chr1 175224662 175224673 CEBPB JASPAR yes 33278510
chr1 175224662 175224673 CEBPB JASPAR yes 118402996
chr1 175224665 175224677 YY1 JASPAR yes 33278511
chr1 175224665 175224677 YY1 JASPAR yes 118402997
chr1 175224694 175224707 NR2F1 JASPAR yes 33278512
chr1 175224694 175224707 NR2F1 JASPAR yes 118402998
chr1 175224696 175224707 ESRRA JASPAR yes 33278513
chr1 175224696 175224707 ESRRB JASPAR yes 33278514
chr1 175224696 175224707 ESRRA JASPAR yes 118402999
chr1 175224696 175224707 ESRRB JASPAR yes 118403000
chr1 175224697 175224705 NR4A2 JASPAR yes 33278515
chr1 175224697 175224705 NR4A2 JASPAR yes 118403001
chr1 175224698 175224708 RORA JASPAR yes 33278516
chr1 175224698 175224708 RORA JASPAR yes 118403002
chr1 175224748 175224759 FOS JASPAR yes 33278517
chr1 175224748 175224759 JUND JASPAR yes 33278518
chr1 175224748 175224759 NFE2 JASPAR yes 33278519
chr1 175224748 175224759 FOS JASPAR yes 118403003
chr1 175224748 175224759 JUND JASPAR yes 118403004
chr1 175224748 175224759 NFE2 JASPAR yes 118403005
chr1 175224749 175224757 JUND TRANSFAC yes 33278520
chr1 175224749 175224757 JUND TRANSFAC yes 118403006
chr1 175224749 175224758 JDP2 JASPAR yes 33278521
chr1 175224749 175224758 JDP2 JASPAR yes 118403007
chr1 175224749 175224760 FOSL2 JASPAR yes 33278522
chr1 175224749 175224760 JUNB JASPAR yes 33278523
chr1 175224749 175224760 FOSL2 JASPAR yes 118403008
chr1 175224749 175224760 JUNB JASPAR yes 118403009
chr1 175224749 175224763 JUN JASPAR yes 33278524
chr1 175224749 175224763 JUN JASPAR yes 118403010
chr1 175224750 175224756 JUN TRANSFAC yes 33278525
chr1 175224750 175224756 JUN TRANSFAC yes 118403011
chr1 175224756 175224766 SREBF1 JASPAR yes 33278526
chr1 175224756 175224766 SREBF2 JASPAR yes 33278527
chr1 175224756 175224766 SREBF1 JASPAR yes 118403012
chr1 175224756 175224766 SREBF2 JASPAR yes 118403013
chr1 175224757 175224765 MGA JASPAR yes 33278528
chr1 175224757 175224765 MGA JASPAR yes 118403014
chr1 175224765 175224780 MEF2A JASPAR yes 33278529
chr1 175224765 175224780 MEF2A JASPAR yes 118403015
chr1 175224766 175224778 MEF2B JASPAR yes 33278530
chr1 175224766 175224778 MEF2D JASPAR yes 33278531
chr1 175224766 175224778 MEF2B JASPAR yes 118403016
chr1 175224766 175224778 MEF2D JASPAR yes 118403017
chr1 175224766 175224781 SOX21 JASPAR yes 33278532
chr1 175224766 175224781 SOX21 JASPAR yes 118403018
chr1 175224767 175224771 H1TF2 TRANSFAC yes 33278533
chr1 175224767 175224771 NFE TRANSFAC yes 33278534
chr1 175224767 175224771 SRF TRANSFAC yes 33278535
chr1 175224767 175224771 H1TF2 TRANSFAC yes 118403019
chr1 175224767 175224771 NFE TRANSFAC yes 118403020
chr1 175224767 175224771 SRF TRANSFAC yes 118403021
chr1 175224767 175224777 MEF2A JASPAR yes 33278536
chr1 175224767 175224777 MEF2A JASPAR yes 118403022
chr1 175224779 175224794 MEF2C JASPAR yes 33278537
chr1 175224779 175224794 MEF2C JASPAR yes 118403023
chr1 175224780 175224795 MEF2A JASPAR yes 33278538
chr1 175224780 175224795 MEF2A JASPAR yes 118403024
chr1 175224781 175224793 MEF2A JASPAR yes 33278539
chr1 175224781 175224793 MEF2A JASPAR yes 118403025
chr1 175224782 175224792 MEF2A JASPAR yes 33278540
chr1 175224782 175224792 MEF2A JASPAR yes 118403026
chr1 175224788 175224799 FOXB1 JASPAR yes 33278541
chr1 175224788 175224799 FOXB1 JASPAR yes 118403027
chr1 175224789 175224797 FOXL1 JASPAR yes 33278542
chr1 175224789 175224797 FOXL1 JASPAR yes 118403028
chr1 175224789 175224801 MEF2A JASPAR yes 33278543
chr1 175224789 175224801 MEF2A JASPAR yes 118403029
chr1 175224790 175224800 MEF2A JASPAR yes 33278544
chr1 175224790 175224800 MEF2A JASPAR yes 118403030
chr1 175224791 175224799 FOXL1 JASPAR yes 33278545
chr1 175224791 175224799 FOXL1 JASPAR yes 118403031
chr1 175224792 175224807 FOXA1 JASPAR yes 33278546
chr1 175224792 175224807 FOXA1 JASPAR yes 118403032
chr1 175224793 175224804 FOXB1 JASPAR yes 33278547
chr1 175224793 175224804 FOXC1 JASPAR yes 33278548
chr1 175224793 175224804 FOXB1 JASPAR yes 118403033
chr1 175224793 175224804 FOXC1 JASPAR yes 118403034
chr1 175224793 175224805 FOXC2 JASPAR yes 33278549
chr1 175224793 175224805 FOXC2 JASPAR yes 118403035
chr1 175224794 175224806 FOXI1 JASPAR yes 33278550
chr1 175224794 175224806 FOXI1 JASPAR yes 118403036
chr1 175224795 175224799 TEAD2 TRANSFAC yes 33278551
chr1 175224795 175224799 TEAD2 TRANSFAC yes 118403037
chr1 175224795 175224800 TBP TRANSFAC yes 33278552
chr1 175224795 175224800 TBP TRANSFAC yes 118403038
chr1 175224795 175224801 TMF TRANSFAC yes 33278553
chr1 175224795 175224801 TMF TRANSFAC yes 118403039
chr1 175224804 175224815 FOXA1 JASPAR yes 33278554
chr1 175224804 175224815 FOXA1 JASPAR yes 118403040
chr1 175224804 175224819 AR JASPAR yes 33278555
chr1 175224804 175224819 AR JASPAR yes 118403041
chr1 175224804 175224822 NR3C1 JASPAR yes 33278556
chr1 175224804 175224822 NR3C1 JASPAR yes 118403042
chr1 175224835 175224838 MYB TRANSFAC yes 33278557
chr1 175224835 175224838 MYB TRANSFAC yes 118403043
SNP sites on vista3976[chr1:175224481-175224839]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 175224530 rs6702393 G C no 741279
chr1 175224531 rs6702395 G A no 741280
chr1 175224598 rs577549337 A C no 741281
chr1 175224602 rs544421711 GC G no 741282
chr1 175224679 rs544564467 C T no 741283
chr1 175224783 rs114661658 T A
MEF2A MEF2C
741284
chr1 175224784 rs4651419 T A
MEF2A MEF2C
741285
chr1 175224803 rs183859241 A G
FOXA1 FOXB1 FOXC1 FOXC2 FOXI1
741286
Genes possibly regulated by vista3976[chr1:175224481-175224839]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 175126123 175162135 - KIAA0040 ENSG00000235750.5 175162135 0.78 1.0 1591 37654
Expression level of Genes
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miRNAs possibly regulated by vista3976[chr1:175224481-175224839]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results