EnhancerDB
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  3. vista39873[chr3:8533422-8533759]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39873[chr3:8533422-8533759]
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Tissue distribution of vista39873
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Transcription factor that possibly regulate vista39873[chr3:8533422-8533759]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 8533409 8533427 MAFF JASPAR yes 295982
chr3 8533409 8533427 MAFF JASPAR yes 70933617
chr3 8533411 8533426 MAFK JASPAR yes 295983
chr3 8533411 8533426 MAFK JASPAR yes 70933618
chr3 8533420 8533429 PITX3 JASPAR yes 295984
chr3 8533420 8533429 PITX3 JASPAR yes 70933619
chr3 8533420 8533430 GSC2 JASPAR yes 295985
chr3 8533420 8533430 GSC JASPAR yes 295986
chr3 8533420 8533430 GSC2 JASPAR yes 70933620
chr3 8533420 8533430 GSC JASPAR yes 70933621
chr3 8533421 8533429 OTX1 JASPAR yes 295987
chr3 8533421 8533429 OTX1 JASPAR yes 70933622
chr3 8533424 8533436 INSM1 JASPAR yes 295988
chr3 8533424 8533436 INSM1 JASPAR yes 70933623
chr3 8533446 8533461 SCRT1 JASPAR yes 295989
chr3 8533446 8533461 SCRT1 JASPAR yes 70933624
chr3 8533448 8533461 SCRT2 JASPAR yes 295990
chr3 8533448 8533461 SCRT2 JASPAR yes 70933625
chr3 8533458 8533471 POU2F2 JASPAR yes 295991
chr3 8533458 8533471 POU2F2 JASPAR yes 70933626
chr3 8533465 8533478 POU2F2 JASPAR yes 295992
chr3 8533465 8533478 POU2F2 JASPAR yes 70933627
chr3 8533484 8533502 ESR2 JASPAR yes 295993
chr3 8533484 8533502 ESR2 JASPAR yes 70933628
chr3 8533486 8533501 ESR2 JASPAR yes 295994
chr3 8533486 8533501 ESR2 JASPAR yes 70933629
chr3 8533497 8533515 RARA JASPAR yes 295995
chr3 8533497 8533515 RARA JASPAR yes 70933630
chr3 8533502 8533517 STAT2 JASPAR yes 295996
chr3 8533502 8533517 STAT2 JASPAR yes 70933631
chr3 8533503 8533517 STAT1 JASPAR yes 295997
chr3 8533503 8533517 STAT1 JASPAR yes 70933632
chr3 8533506 8533527 REST JASPAR yes 295998
chr3 8533506 8533527 REST JASPAR yes 70933633
chr3 8533513 8533524 EBF1 JASPAR yes 295999
chr3 8533513 8533524 EBF1 JASPAR yes 70933634
chr3 8533525 8533530 ETS2 TRANSFAC yes 296000
chr3 8533525 8533530 ETS2 TRANSFAC yes 70933635
chr3 8533533 8533547 SPI1 JASPAR yes 296001
chr3 8533533 8533547 SPI1 JASPAR yes 70933636
chr3 8533537 8533542 TFAP2A TRANSFAC yes 296002
chr3 8533537 8533542 TFAP2A TRANSFAC yes 70933637
chr3 8533537 8533543 MZF1 JASPAR yes 296003
chr3 8533537 8533543 MZF1 JASPAR yes 70933638
chr3 8533556 8533571 MEF2A JASPAR yes 296004
chr3 8533556 8533571 MEF2A JASPAR yes 70933639
chr3 8533563 8533581 SRF JASPAR yes 296005
chr3 8533563 8533581 SRF JASPAR yes 70933640
chr3 8533570 8533583 ELF1 JASPAR yes 296006
chr3 8533570 8533583 ELF1 JASPAR yes 70933641
chr3 8533572 8533583 ELF5 JASPAR yes 296007
chr3 8533572 8533583 ELF5 JASPAR yes 70933642
chr3 8533574 8533579 ETS2 TRANSFAC yes 296008
chr3 8533574 8533579 ETS2 TRANSFAC yes 70933643
chr3 8533578 8533593 AR JASPAR yes 296009
chr3 8533578 8533593 AR JASPAR yes 70933644
chr3 8533592 8533596 YY1 TRANSFAC yes 296010
chr3 8533592 8533596 YY1 TRANSFAC yes 70933645
chr3 8533595 8533610 PRDM1 JASPAR yes 296011
chr3 8533595 8533610 PRDM1 JASPAR yes 70933646
chr3 8533600 8533605 ETS2 TRANSFAC yes 296012
chr3 8533600 8533605 ETS2 TRANSFAC yes 70933647
chr3 8533600 8533614 STAT1 JASPAR yes 296013
chr3 8533600 8533614 STAT1 JASPAR yes 70933648
chr3 8533637 8533651 TLX1 JASPAR yes 296014
chr3 8533637 8533651 TLX1 JASPAR yes 70933649
chr3 8533638 8533652 TLX1 JASPAR yes 296015
chr3 8533638 8533652 TLX1 JASPAR yes 70933650
chr3 8533655 8533667 ZBTB7B JASPAR yes 296016
chr3 8533655 8533667 ZBTB7B JASPAR yes 70933651
chr3 8533656 8533668 ZBTB7A JASPAR yes 296017
chr3 8533656 8533668 ZBTB7A JASPAR yes 70933652
chr3 8533658 8533663 SP1 TRANSFAC yes 296018
chr3 8533658 8533663 SP1 TRANSFAC yes 70933653
chr3 8533669 8533678 POU3F4 JASPAR yes 296019
chr3 8533669 8533678 POU3F4 JASPAR yes 70933654
chr3 8533696 8533715 CTCF JASPAR yes 296020
chr3 8533696 8533715 CTCF JASPAR yes 70933655
chr3 8533720 8533734 POU1F1 JASPAR yes 296021
chr3 8533720 8533734 POU1F1 JASPAR yes 70933656
chr3 8533721 8533733 POU3F1 JASPAR yes 296022
chr3 8533721 8533733 POU3F2 JASPAR yes 296023
chr3 8533721 8533733 POU3F1 JASPAR yes 70933657
chr3 8533721 8533733 POU3F2 JASPAR yes 70933658
chr3 8533722 8533726 YY1 TRANSFAC yes 296024
chr3 8533722 8533726 YY1 TRANSFAC yes 70933659
chr3 8533728 8533732 YY1 TRANSFAC yes 296025
chr3 8533728 8533732 YY1 TRANSFAC yes 70933660
SNP sites on vista39873[chr3:8533422-8533759]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 8533592 rs356423 A T
AR YY1
6534027
chr3 8533623 rs139606045 C A no 6534028
Genes possibly regulated by vista39873[chr3:8533422-8533759]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 8543393 8609805 + LMCD1 ENSG00000071282.7 8543393 0.87 0.97 3372 90366
Expression level of Genes
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miRNAs possibly regulated by vista39873[chr3:8533422-8533759]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results