EnhancerDB
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  3. vista39874[chr3:8540908-8541201]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39874[chr3:8540908-8541201]
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Tissue distribution of vista39874
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Transcription factor that possibly regulate vista39874[chr3:8540908-8541201]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 8540914 8540918 LFA1 TRANSFAC yes 296986
chr3 8540914 8540918 LFA1 TRANSFAC yes 70933661
chr3 8540940 8540945 GATA2 JASPAR yes 296987
chr3 8540940 8540945 GATA2 JASPAR yes 70933662
chr3 8540953 8540959 LEF1 TRANSFAC yes 296988
chr3 8540953 8540959 SOX10 JASPAR yes 296989
chr3 8540953 8540959 LEF1 TRANSFAC yes 70933663
chr3 8540953 8540959 SOX10 JASPAR yes 70933664
chr3 8540993 8540997 TEAD2 TRANSFAC yes 296990
chr3 8540993 8540997 TEAD2 TRANSFAC yes 70933665
chr3 8540993 8540998 TBP TRANSFAC yes 296991
chr3 8540993 8540998 TBP TRANSFAC yes 70933666
chr3 8541011 8541025 SPIC JASPAR yes 296992
chr3 8541011 8541025 SPIC JASPAR yes 70933667
chr3 8541011 8541032 MAFG JASPAR yes 296993
chr3 8541011 8541032 MAFG JASPAR yes 70933668
chr3 8541017 8541028 NFE2L2 JASPAR yes 296994
chr3 8541017 8541028 NFE2L2 JASPAR yes 70933669
chr3 8541028 8541037 SOX9 JASPAR yes 296995
chr3 8541028 8541037 SOX9 JASPAR yes 70933670
chr3 8541104 8541119 FOXP1 JASPAR yes 296996
chr3 8541104 8541119 FOXP1 JASPAR yes 70933671
chr3 8541105 8541116 FOXP2 JASPAR yes 296997
chr3 8541105 8541116 FOXP2 JASPAR yes 70933672
chr3 8541105 8541117 FOXC2 JASPAR yes 296998
chr3 8541105 8541117 FOXC2 JASPAR yes 70933673
chr3 8541105 8541119 FOXF2 JASPAR yes 296999
chr3 8541105 8541119 FOXF2 JASPAR yes 70933674
chr3 8541106 8541117 FOXC1 JASPAR yes 297000
chr3 8541106 8541117 FOXC1 JASPAR yes 70933675
chr3 8541107 8541118 FOXA1 JASPAR yes 297001
chr3 8541107 8541118 FOXA1 JASPAR yes 70933676
chr3 8541107 8541122 FOXA1 JASPAR yes 297002
chr3 8541107 8541122 FOXA1 JASPAR yes 70933677
chr3 8541108 8541123 FOXP1 JASPAR yes 297003
chr3 8541108 8541123 FOXP1 JASPAR yes 70933678
chr3 8541109 8541121 FOXC2 JASPAR yes 297004
chr3 8541109 8541121 FOXC2 JASPAR yes 70933679
chr3 8541109 8541122 POU2F2 JASPAR yes 297005
chr3 8541109 8541122 POU2F2 JASPAR yes 70933680
chr3 8541109 8541123 POU1F1 JASPAR yes 297006
chr3 8541109 8541123 POU1F1 JASPAR yes 70933681
chr3 8541110 8541121 FOXB1 JASPAR yes 297007
chr3 8541110 8541121 FOXC1 JASPAR yes 297008
chr3 8541110 8541121 FOXB1 JASPAR yes 70933682
chr3 8541110 8541121 FOXC1 JASPAR yes 70933683
chr3 8541110 8541122 POU3F1 JASPAR yes 297009
chr3 8541110 8541122 POU3F2 JASPAR yes 297010
chr3 8541110 8541122 POU3F1 JASPAR yes 70933684
chr3 8541110 8541122 POU3F2 JASPAR yes 70933685
chr3 8541110 8541123 POU3F3 JASPAR yes 297011
chr3 8541110 8541123 POU3F3 JASPAR yes 70933686
chr3 8541111 8541115 YY1 TRANSFAC yes 297012
chr3 8541111 8541115 YY1 TRANSFAC yes 70933687
chr3 8541111 8541122 FOXA1 JASPAR yes 297013
chr3 8541111 8541122 FOXA1 JASPAR yes 70933688
chr3 8541111 8541123 POU2F1 JASPAR yes 297014
chr3 8541111 8541123 POU2F1 JASPAR yes 70933689
chr3 8541112 8541121 POU3F4 JASPAR yes 297015
chr3 8541112 8541121 POU5F1B JASPAR yes 297016
chr3 8541112 8541121 POU3F4 JASPAR yes 70933690
chr3 8541112 8541121 POU5F1B JASPAR yes 70933691
chr3 8541113 8541121 FOXL1 JASPAR yes 297017
chr3 8541113 8541121 FOXL1 JASPAR yes 70933692
chr3 8541117 8541129 GRHL1 JASPAR yes 297018
chr3 8541117 8541129 GRHL1 JASPAR yes 70933693
chr3 8541127 8541130 MYB TRANSFAC yes 297019
chr3 8541127 8541130 MYB TRANSFAC yes 70933694
chr3 8541162 8541175 ZBTB18 JASPAR yes 297020
chr3 8541162 8541175 ZBTB18 JASPAR yes 70933695
chr3 8541164 8541174 ID4 JASPAR yes 297021
chr3 8541164 8541174 TCF3 JASPAR yes 297022
chr3 8541164 8541174 TCF4 JASPAR yes 297023
chr3 8541164 8541174 ID4 JASPAR yes 70933696
chr3 8541164 8541174 TCF3 JASPAR yes 70933697
chr3 8541164 8541174 TCF4 JASPAR yes 70933698
chr3 8541166 8541175 ZEB1 JASPAR yes 297024
chr3 8541166 8541175 ZEB1 JASPAR yes 70933699
chr3 8541175 8541186 CEBPB JASPAR yes 297025
chr3 8541175 8541186 CEBPB JASPAR yes 70933700
chr3 8541176 8541187 CEBPA JASPAR yes 297026
chr3 8541176 8541187 CEBPA JASPAR yes 70933701
SNP sites on vista39874[chr3:8540908-8541201]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 8541075 rs114374366 C T no 6534105
chr3 8541185 rs78166422 A G
CEBPA CEBPB
6534106
Genes possibly regulated by vista39874[chr3:8540908-8541201]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 8543393 8609805 + LMCD1 ENSG00000071282.7 8543393 0.87 0.97 3372 97808
Expression level of Genes
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miRNAs possibly regulated by vista39874[chr3:8540908-8541201]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results