EnhancerDB
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  3. vista39875[chr3:8544131-8544195]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39875[chr3:8544131-8544195]
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Tissue distribution of vista39875
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Transcription factor that possibly regulate vista39875[chr3:8544131-8544195]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 8544129 8544134 ETS2 TRANSFAC yes 297517
chr3 8544129 8544134 ETS2 TRANSFAC yes 70933702
chr3 8544131 8544141 REL JASPAR yes 297518
chr3 8544131 8544141 REL JASPAR yes 70933703
chr3 8544131 8544142 NFKB1 JASPAR yes 297519
chr3 8544131 8544142 NFKB1 JASPAR yes 70933704
chr3 8544132 8544142 REL JASPAR yes 297520
chr3 8544132 8544142 REL JASPAR yes 70933705
chr3 8544145 8544166 ZNF263 JASPAR yes 297521
chr3 8544145 8544166 ZNF263 JASPAR yes 70933706
chr3 8544150 8544165 AR JASPAR yes 297522
chr3 8544150 8544165 AR JASPAR yes 70933707
chr3 8544155 8544174 CTCF JASPAR yes 297523
chr3 8544155 8544174 CTCF JASPAR yes 70933708
chr3 8544157 8544161 NFE TRANSFAC yes 297524
chr3 8544157 8544161 NFE TRANSFAC yes 70933709
chr3 8544190 8544204 POU4F1 JASPAR yes 297525
chr3 8544190 8544204 POU4F1 JASPAR yes 70933710
chr3 8544193 8544208 FOXA1 JASPAR yes 297526
chr3 8544193 8544208 FOXA1 JASPAR yes 70933711
chr3 8544195 8544207 FOXC2 JASPAR yes 297527
chr3 8544195 8544207 FOXC2 JASPAR yes 70933712
SNP sites on vista39875[chr3:8544131-8544195]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 8544141 rs183692734 C T
NFKB1 REL
6534148
Genes possibly regulated by vista39875[chr3:8544131-8544195]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 8543393 8609805 + LMCD1 ENSG00000071282.7 8543393 0.87 0.97 3372 99262
Expression level of Genes
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miRNAs possibly regulated by vista39875[chr3:8544131-8544195]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results