EnhancerDB
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  3. vista39876[chr3:8754319-8754664]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39876[chr3:8754319-8754664]
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Tissue distribution of vista39876
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Transcription factor that possibly regulate vista39876[chr3:8754319-8754664]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 8754314 8754320 HiNF-A TRANSFAC yes 311442
chr3 8754314 8754320 HiNF-A TRANSFAC yes 70933713
chr3 8754343 8754347 YY1 TRANSFAC yes 311443
chr3 8754343 8754347 YY1 TRANSFAC yes 70933714
chr3 8754345 8754356 HOXC13 JASPAR yes 311444
chr3 8754345 8754356 HOXC13 JASPAR yes 70933715
chr3 8754348 8754351 MYB TRANSFAC yes 311445
chr3 8754348 8754351 MYB TRANSFAC yes 70933716
chr3 8754361 8754372 FOSL2 JASPAR yes 311446
chr3 8754361 8754372 JUNB JASPAR yes 311447
chr3 8754361 8754372 FOSL2 JASPAR yes 70933717
chr3 8754361 8754372 JUNB JASPAR yes 70933718
chr3 8754362 8754373 FOS JASPAR yes 311448
chr3 8754362 8754373 FOSL1 JASPAR yes 311449
chr3 8754362 8754373 JUND JASPAR yes 311450
chr3 8754362 8754373 NFE2 JASPAR yes 311451
chr3 8754362 8754373 FOS JASPAR yes 70933719
chr3 8754362 8754373 FOSL1 JASPAR yes 70933720
chr3 8754362 8754373 JUND JASPAR yes 70933721
chr3 8754362 8754373 NFE2 JASPAR yes 70933722
chr3 8754363 8754372 JDP2 JASPAR yes 311452
chr3 8754363 8754372 JDP2 JASPAR yes 70933723
chr3 8754363 8754374 FOSL2 JASPAR yes 311453
chr3 8754363 8754374 JUNB JASPAR yes 311454
chr3 8754363 8754374 FOSL2 JASPAR yes 70933724
chr3 8754363 8754374 JUNB JASPAR yes 70933725
chr3 8754363 8754377 JUN JASPAR yes 311455
chr3 8754363 8754377 JUN JASPAR yes 70933726
chr3 8754402 8754405 MYB TRANSFAC yes 311456
chr3 8754402 8754405 MYB TRANSFAC yes 70933727
chr3 8754410 8754423 ZBTB18 JASPAR yes 311457
chr3 8754410 8754423 ZBTB18 JASPAR yes 70933728
chr3 8754411 8754421 MSC JASPAR yes 311458
chr3 8754411 8754421 NHLH1 JASPAR yes 311459
chr3 8754411 8754421 MSC JASPAR yes 70933729
chr3 8754411 8754421 NHLH1 JASPAR yes 70933730
chr3 8754420 8754426 HiNF-A TRANSFAC yes 311460
chr3 8754420 8754426 HiNF-A TRANSFAC yes 70933731
chr3 8754424 8754433 HIC2 JASPAR yes 311461
chr3 8754424 8754433 HIC2 JASPAR yes 70933732
chr3 8754426 8754438 SRF JASPAR yes 311462
chr3 8754426 8754438 SRF JASPAR yes 70933733
chr3 8754447 8754457 MSC JASPAR yes 311463
chr3 8754447 8754457 MSC JASPAR yes 70933734
chr3 8754462 8754476 FOXF2 JASPAR yes 311464
chr3 8754462 8754476 FOXF2 JASPAR yes 70933735
chr3 8754464 8754468 YY1 TRANSFAC yes 311465
chr3 8754464 8754468 YY1 TRANSFAC yes 70933736
chr3 8754483 8754489 MZF1 JASPAR yes 311466
chr3 8754483 8754489 MZF1 JASPAR yes 70933737
chr3 8754492 8754505 TFAP2A JASPAR yes 311467
chr3 8754492 8754505 TFAP2B JASPAR yes 311468
chr3 8754492 8754505 TFAP2C JASPAR yes 311469
chr3 8754492 8754505 TFAP2A JASPAR yes 70933738
chr3 8754492 8754505 TFAP2B JASPAR yes 70933739
chr3 8754492 8754505 TFAP2C JASPAR yes 70933740
chr3 8754492 8754506 EBF1 JASPAR yes 311470
chr3 8754492 8754506 EBF1 JASPAR yes 70933741
chr3 8754493 8754506 TFAP2A JASPAR yes 311471
chr3 8754493 8754506 TFAP2B JASPAR yes 311472
chr3 8754493 8754506 TFAP2C JASPAR yes 311473
chr3 8754493 8754506 TFAP2A JASPAR yes 70933742
chr3 8754493 8754506 TFAP2B JASPAR yes 70933743
chr3 8754493 8754506 TFAP2C JASPAR yes 70933744
chr3 8754493 8754508 TFAP2C JASPAR yes 311474
chr3 8754493 8754508 TFAP2C JASPAR yes 70933745
chr3 8754494 8754505 EBF1 JASPAR yes 311475
chr3 8754494 8754505 EBF1 JASPAR yes 70933746
chr3 8754500 8754505 SP1 TRANSFAC yes 311476
chr3 8754500 8754505 SP1 TRANSFAC yes 70933747
chr3 8754503 8754514 FLI1 JASPAR yes 311477
chr3 8754503 8754514 FLI1 JASPAR yes 70933748
chr3 8754505 8754513 EHF JASPAR yes 311478
chr3 8754505 8754513 EHF JASPAR yes 70933749
chr3 8754526 8754531 SP1 TRANSFAC yes 311479
chr3 8754526 8754531 SP1 TRANSFAC yes 70933750
chr3 8754536 8754546 ALX3 JASPAR yes 311480
chr3 8754536 8754546 MIXL1 JASPAR yes 311481
chr3 8754536 8754546 NOTO JASPAR yes 311482
chr3 8754536 8754546 POU6F1 JASPAR yes 311483
chr3 8754536 8754546 ALX3 JASPAR yes 70933751
chr3 8754536 8754546 MIXL1 JASPAR yes 70933752
chr3 8754536 8754546 NOTO JASPAR yes 70933753
chr3 8754536 8754546 POU6F1 JASPAR yes 70933754
chr3 8754537 8754545 ISX JASPAR yes 311484
chr3 8754537 8754545 LMX1A JASPAR yes 311485
chr3 8754537 8754545 LMX1B JASPAR yes 311486
chr3 8754537 8754545 NKX6-1 JASPAR yes 311487
chr3 8754537 8754545 NKX6-2 JASPAR yes 311488
chr3 8754537 8754545 PRRX1 JASPAR yes 311489
chr3 8754537 8754545 RAX2 JASPAR yes 311490
chr3 8754537 8754545 SHOX JASPAR yes 311491
chr3 8754537 8754545 UNCX JASPAR yes 311492
chr3 8754537 8754545 VAX1 JASPAR yes 311493
chr3 8754537 8754545 ISX JASPAR yes 70933755
chr3 8754537 8754545 LMX1A JASPAR yes 70933756
chr3 8754537 8754545 LMX1B JASPAR yes 70933757
chr3 8754537 8754545 NKX6-1 JASPAR yes 70933758
chr3 8754537 8754545 NKX6-2 JASPAR yes 70933759
chr3 8754537 8754545 PRRX1 JASPAR yes 70933760
chr3 8754537 8754545 RAX2 JASPAR yes 70933761
chr3 8754537 8754545 SHOX JASPAR yes 70933762
chr3 8754537 8754545 UNCX JASPAR yes 70933763
chr3 8754537 8754545 VAX1 JASPAR yes 70933764
chr3 8754550 8754568 NR3C1 JASPAR yes 311494
chr3 8754550 8754568 NR3C1 JASPAR yes 70933765
chr3 8754558 8754573 STAT2 JASPAR yes 311495
chr3 8754558 8754573 STAT2 JASPAR yes 70933766
chr3 8754564 8754568 H1TF2 TRANSFAC yes 311496
chr3 8754564 8754568 NFE TRANSFAC yes 311497
chr3 8754564 8754568 SRF TRANSFAC yes 311498
chr3 8754564 8754568 H1TF2 TRANSFAC yes 70933767
chr3 8754564 8754568 NFE TRANSFAC yes 70933768
chr3 8754564 8754568 SRF TRANSFAC yes 70933769
chr3 8754604 8754615 ESRRB JASPAR yes 311499
chr3 8754604 8754615 ESRRB JASPAR yes 70933770
chr3 8754605 8754620 FOXA1 JASPAR yes 311500
chr3 8754605 8754620 FOXA1 JASPAR yes 70933771
chr3 8754606 8754614 NR4A2 JASPAR yes 311501
chr3 8754606 8754614 NR4A2 JASPAR yes 70933772
chr3 8754606 8754617 FOXC1 JASPAR yes 311502
chr3 8754606 8754617 FOXC1 JASPAR yes 70933773
chr3 8754606 8754618 FOXC2 JASPAR yes 311503
chr3 8754606 8754618 FOXC2 JASPAR yes 70933774
chr3 8754607 8754624 RARA JASPAR yes 311504
chr3 8754607 8754624 RXRA JASPAR yes 311505
chr3 8754607 8754624 RARA JASPAR yes 70933775
chr3 8754607 8754624 RXRA JASPAR yes 70933776
chr3 8754608 8754612 ESR1 TRANSFAC yes 311506
chr3 8754608 8754612 ESR1 TRANSFAC yes 70933777
chr3 8754609 8754617 FOXO3 JASPAR yes 311507
chr3 8754609 8754617 FOXO3 JASPAR yes 70933778
chr3 8754642 8754647 SP1 TRANSFAC yes 311508
chr3 8754642 8754647 SP1 TRANSFAC yes 70933779
chr3 8754646 8754661 FOXP1 JASPAR yes 311509
chr3 8754646 8754661 FOXP1 JASPAR yes 70933780
chr3 8754647 8754658 FOXA1 JASPAR yes 311510
chr3 8754647 8754658 FOXA1 JASPAR yes 70933781
chr3 8754648 8754660 FOXC2 JASPAR yes 311511
chr3 8754648 8754660 FOXC2 JASPAR yes 70933782
chr3 8754649 8754660 FOXP2 JASPAR yes 311512
chr3 8754649 8754660 FOXP2 JASPAR yes 70933783
chr3 8754651 8754660 SRY JASPAR yes 311513
chr3 8754651 8754660 SRY JASPAR yes 70933784
chr3 8754655 8754661 SOX10 JASPAR yes 311514
chr3 8754655 8754661 SOX10 JASPAR yes 70933785
SNP sites on vista39876[chr3:8754319-8754664]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 8754437 rs78065061 G A
SRF
6536169
chr3 8754453 rs192535625 C T
MSC
6536170
chr3 8754473 rs73810965 A C
FOXF2
6536171
chr3 8754550 rs576266282 G T
NR3C1
6536172
chr3 8754577 rs6774842 C A no 6536173
chr3 8754585 rs6798599 G A no 6536174
chr3 8754639 rs6774860 C G no 6536175
chr3 8754648 rs6798626 G A
FOXA1 FOXC2 FOXP1
6536176
Genes possibly regulated by vista39876[chr3:8754319-8754664]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 8661086 8786726 - SSUH2 ENSG00000125046.10 8786726 0.88 0.94 3373 67938
chr3 8775486 8883492 + CAV3 ENSG00000182533.6 8775486 0.97 1.0 3374 79178
chr3 8792094 8811314 - OXTR ENSG00000180914.6 8811314 0.96 0.94 3375 43350
Expression level of Genes
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miRNAs possibly regulated by vista39876[chr3:8754319-8754664]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results