EnhancerDB
  1. Home
  2. Enhancers
  3. vista39880[chr3:8802643-8803023]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39880[chr3:8802643-8803023]
Back to top
Tissue distribution of vista39880
Back to top
Transcription factor that possibly regulate vista39880[chr3:8802643-8803023]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 8802634 8802645 NFE2L2 JASPAR yes 313720
chr3 8802634 8802645 NFE2L2 JASPAR yes 70933883
chr3 8802634 8802649 HNF4G JASPAR yes 313721
chr3 8802634 8802649 HNF4G JASPAR yes 70933884
chr3 8802656 8802666 NFIA JASPAR yes 313722
chr3 8802656 8802666 NFIA JASPAR yes 70933885
chr3 8802658 8802664 NFIC JASPAR yes 313723
chr3 8802658 8802664 NFIC JASPAR yes 70933886
chr3 8802687 8802700 ZBTB18 JASPAR yes 313724
chr3 8802687 8802700 ZBTB18 JASPAR yes 70933887
chr3 8802688 8802698 MSC JASPAR yes 313725
chr3 8802688 8802698 MSC JASPAR yes 70933888
chr3 8802712 8802724 HES7 JASPAR yes 313726
chr3 8802712 8802724 HES7 JASPAR yes 70933889
chr3 8802719 8802729 MAX JASPAR yes 313727
chr3 8802719 8802729 MAX JASPAR yes 70933890
chr3 8802720 8802730 CLOCK JASPAR yes 313728
chr3 8802720 8802730 MAX JASPAR yes 313729
chr3 8802720 8802730 MNT JASPAR yes 313730
chr3 8802720 8802730 CLOCK JASPAR yes 70933891
chr3 8802720 8802730 MAX JASPAR yes 70933892
chr3 8802720 8802730 MNT JASPAR yes 70933893
chr3 8802722 8802727 MYC TRANSFAC yes 313731
chr3 8802722 8802727 USF1 TRANSFAC yes 313732
chr3 8802722 8802727 USF2 TRANSFAC yes 313733
chr3 8802722 8802727 MYC TRANSFAC yes 70933894
chr3 8802722 8802727 USF1 TRANSFAC yes 70933895
chr3 8802722 8802727 USF2 TRANSFAC yes 70933896
chr3 8802722 8802729 USF1 JASPAR yes 313734
chr3 8802722 8802729 USF1 JASPAR yes 70933897
chr3 8802749 8802754 GATA2 JASPAR yes 313735
chr3 8802749 8802754 GATA2 JASPAR yes 70933898
chr3 8802817 8802832 FOXA1 JASPAR yes 313736
chr3 8802817 8802832 FOXA1 JASPAR yes 70933899
chr3 8802818 8802829 FOXB1 JASPAR yes 313737
chr3 8802818 8802829 FOXC1 JASPAR yes 313738
chr3 8802818 8802829 FOXB1 JASPAR yes 70933900
chr3 8802818 8802829 FOXC1 JASPAR yes 70933901
chr3 8802827 8802836 NFIX JASPAR yes 313739
chr3 8802827 8802836 NFIX JASPAR yes 70933902
chr3 8802827 8802837 NFIA JASPAR yes 313740
chr3 8802827 8802837 NFIA JASPAR yes 70933903
chr3 8802829 8802835 NFIC JASPAR yes 313741
chr3 8802829 8802835 NFIC JASPAR yes 70933904
chr3 8802860 8802874 IRF7 JASPAR yes 313742
chr3 8802860 8802874 IRF7 JASPAR yes 70933905
chr3 8802861 8802876 PRDM1 JASPAR yes 313743
chr3 8802861 8802876 PRDM1 JASPAR yes 70933906
chr3 8802862 8802883 ZNF263 JASPAR yes 313744
chr3 8802862 8802883 ZNF263 JASPAR yes 70933907
chr3 8802863 8802884 IRF1 JASPAR yes 313745
chr3 8802863 8802884 IRF1 JASPAR yes 70933908
chr3 8802868 8802882 STAT1 JASPAR yes 313746
chr3 8802868 8802882 STAT1 JASPAR yes 70933909
chr3 8802868 8802883 PRDM1 JASPAR yes 313747
chr3 8802868 8802883 STAT2 JASPAR yes 313748
chr3 8802868 8802883 PRDM1 JASPAR yes 70933910
chr3 8802868 8802883 STAT2 JASPAR yes 70933911
chr3 8802870 8802891 IRF1 JASPAR yes 313749
chr3 8802870 8802891 IRF1 JASPAR yes 70933912
chr3 8802871 8802881 NFATC3 JASPAR yes 313750
chr3 8802871 8802881 NFATC3 JASPAR yes 70933913
chr3 8802872 8802887 IRF9 JASPAR yes 313751
chr3 8802872 8802887 IRF9 JASPAR yes 70933914
chr3 8802873 8802887 IRF7 JASPAR yes 313752
chr3 8802873 8802887 IRF8 JASPAR yes 313753
chr3 8802873 8802887 IRF7 JASPAR yes 70933915
chr3 8802873 8802887 IRF8 JASPAR yes 70933916
chr3 8802874 8802888 STAT1 JASPAR yes 313754
chr3 8802874 8802888 STAT1 JASPAR yes 70933917
chr3 8802874 8802889 STAT2 JASPAR yes 313755
chr3 8802874 8802889 STAT2 JASPAR yes 70933918
chr3 8802874 8802892 IRF2 JASPAR yes 313756
chr3 8802874 8802892 IRF2 JASPAR yes 70933919
chr3 8802884 8802890 SOX10 JASPAR yes 313757
chr3 8802884 8802890 SOX10 JASPAR yes 70933920
chr3 8802888 8802897 NFIX JASPAR yes 313758
chr3 8802888 8802897 NFIX JASPAR yes 70933921
chr3 8802889 8802898 HIC2 JASPAR yes 313759
chr3 8802889 8802898 HIC2 JASPAR yes 70933922
chr3 8802890 8802896 NFIC JASPAR yes 313760
chr3 8802890 8802896 NFIC JASPAR yes 70933923
chr3 8802897 8802909 TEAD1 JASPAR yes 313761
chr3 8802897 8802909 TEAD1 JASPAR yes 70933924
chr3 8802901 8802911 TFEB JASPAR yes 313762
chr3 8802901 8802911 TFEB JASPAR yes 70933925
chr3 8802910 8802920 TFAP4 JASPAR yes 313763
chr3 8802910 8802920 TFAP4 JASPAR yes 70933926
chr3 8802954 8802958 LFA1 TRANSFAC yes 313764
chr3 8802954 8802958 LFA1 TRANSFAC yes 70933927
chr3 8802967 8802983 ZNF143 JASPAR yes 313765
chr3 8802967 8802983 ZNF143 JASPAR yes 70933928
chr3 8802980 8802986 MAZ TRANSFAC yes 313766
chr3 8802980 8802986 MAZ TRANSFAC yes 70933929
chr3 8802984 8802988 LFA1 TRANSFAC yes 313767
chr3 8802984 8802988 LFA1 TRANSFAC yes 70933930
chr3 8802991 8802997 YY1 JASPAR yes 313768
chr3 8802991 8802997 YY1 JASPAR yes 70933931
chr3 8802997 8803007 ETS1 JASPAR yes 313769
chr3 8802997 8803007 ETV1 JASPAR yes 313770
chr3 8802997 8803007 ETV3 JASPAR yes 313771
chr3 8802997 8803007 ETV4 JASPAR yes 313772
chr3 8802997 8803007 ETV5 JASPAR yes 313773
chr3 8802997 8803007 ETS1 JASPAR yes 70933932
chr3 8802997 8803007 ETV1 JASPAR yes 70933933
chr3 8802997 8803007 ETV3 JASPAR yes 70933934
chr3 8802997 8803007 ETV4 JASPAR yes 70933935
chr3 8802997 8803007 ETV5 JASPAR yes 70933936
chr3 8803013 8803033 RREB1 JASPAR yes 313774
chr3 8803013 8803033 RREB1 JASPAR yes 70933937
SNP sites on vista39880[chr3:8802643-8803023]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 8802668 rs58102519 T C no 6536450
chr3 8802743 rs13316193 T C no 6536451
chr3 8802745 rs11131148 T C no 6536452
chr3 8802808 rs62243369 G A,T no 6536453
chr3 8802813 rs62243370 G A no 6536454
chr3 8802819 rs74356995 A C
FOXA1 FOXB1 FOXC1
6536455
chr3 8802851 rs11131149 G A no 6536456
chr3 8802909 rs116502929 G A
TEAD1 TFEB
6536457
chr3 8802970 rs192838076 C T
ZNF143
6536458
chr3 8802971 rs114641034 C G,T
ZNF143
6536459
chr3 8803001 rs59190448 G A
ETS1 ETV1 ETV3 ETV4 ETV5
6536460
Genes possibly regulated by vista39880[chr3:8802643-8803023]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 8661086 8786726 - SSUH2 ENSG00000125046.10 8786726 0.88 0.94 3373 84083
chr3 8775486 8883492 + CAV3 ENSG00000182533.6 8775486 0.97 1.0 3374 72843
chr3 8792094 8811314 - OXTR ENSG00000180914.6 8811314 0.96 0.94 3375 91709
Expression level of Genes
Back to top
miRNAs possibly regulated by vista39880[chr3:8802643-8803023]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results