EnhancerDB
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  3. vista39882[chr3:8906303-8906783]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39882[chr3:8906303-8906783]
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Tissue distribution of vista39882
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Transcription factor that possibly regulate vista39882[chr3:8906303-8906783]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 8906343 8906582 SPI1 UCSC Txn Factor no Conserved 108528122
chr3 8906318 8906328 EMX1 JASPAR yes 70933970
chr3 8906318 8906328 EMX2 JASPAR yes 70933971
chr3 8906318 8906328 EN2 JASPAR yes 70933972
chr3 8906318 8906328 ESX1 JASPAR yes 70933973
chr3 8906318 8906328 EVX1 JASPAR yes 70933974
chr3 8906318 8906328 EVX2 JASPAR yes 70933975
chr3 8906318 8906328 GBX1 JASPAR yes 70933976
chr3 8906318 8906328 GBX2 JASPAR yes 70933977
chr3 8906318 8906328 GSX1 JASPAR yes 70933978
chr3 8906318 8906328 HOXA2 JASPAR yes 70933979
chr3 8906318 8906328 HOXB2 JASPAR yes 70933980
chr3 8906318 8906328 HOXB3 JASPAR yes 70933981
chr3 8906318 8906328 LBX2 JASPAR yes 70933982
chr3 8906318 8906328 LHX2 JASPAR yes 70933983
chr3 8906318 8906328 LHX6 JASPAR yes 70933984
chr3 8906318 8906328 MEOX1 JASPAR yes 70933985
chr3 8906318 8906328 MEOX2 JASPAR yes 70933986
chr3 8906318 8906328 NOTO JASPAR yes 70933987
chr3 8906318 8906328 POU6F1 JASPAR yes 70933988
chr3 8906319 8906327 DLX6 JASPAR yes 70933989
chr3 8906319 8906327 EN1 JASPAR yes 70933990
chr3 8906319 8906327 LBX1 JASPAR yes 70933991
chr3 8906319 8906327 PAX4 JASPAR yes 70933992
chr3 8906319 8906327 PDX1 JASPAR yes 70933993
chr3 8906319 8906327 VAX1 JASPAR yes 70933994
chr3 8906319 8906327 VAX2 JASPAR yes 70933995
chr3 8906319 8906327 VSX1 JASPAR yes 70933996
chr3 8906319 8906327 VSX2 JASPAR yes 70933997
chr3 8906319 8906329 POU6F2 JASPAR yes 70933998
chr3 8906334 8906339 ETS2 TRANSFAC yes 70933999
chr3 8906366 8906372 ZNF354C JASPAR yes 70934000
chr3 8906369 8906375 YY1 JASPAR yes 70934001
chr3 8906394 8906406 YY1 JASPAR yes 70934002
chr3 8906401 8906412 CEBPB JASPAR yes 70934003
chr3 8906402 8906413 CEBPA JASPAR yes 70934004
chr3 8906407 8906411 H1TF2 TRANSFAC yes 70934005
chr3 8906407 8906411 NFE TRANSFAC yes 70934006
chr3 8906407 8906411 SRF TRANSFAC yes 70934007
chr3 8906443 8906452 VENTX JASPAR yes 70934008
chr3 8906443 8906453 EN2 JASPAR yes 70934009
chr3 8906443 8906453 GBX1 JASPAR yes 70934010
chr3 8906443 8906453 GBX2 JASPAR yes 70934011
chr3 8906443 8906453 HOXB3 JASPAR yes 70934012
chr3 8906444 8906452 BARX1 JASPAR yes 70934013
chr3 8906444 8906452 EN1 JASPAR yes 70934014
chr3 8906444 8906452 ISL2 JASPAR yes 70934015
chr3 8906444 8906452 MSX1 JASPAR yes 70934016
chr3 8906444 8906452 MSX2 JASPAR yes 70934017
chr3 8906444 8906452 PDX1 JASPAR yes 70934018
chr3 8906454 8906459 NFY TRANSFAC yes 70934019
chr3 8906455 8906476 IRF1 JASPAR yes 70934020
chr3 8906459 8906473 STAT1 JASPAR yes 70934021
chr3 8906459 8906474 PRDM1 JASPAR yes 70934022
chr3 8906459 8906474 STAT2 JASPAR yes 70934023
chr3 8906459 8906477 IRF2 JASPAR yes 70934024
chr3 8906460 8906472 IRF1 JASPAR yes 70934025
chr3 8906461 8906482 IRF1 JASPAR yes 70934026
chr3 8906464 8906478 IRF8 JASPAR yes 70934027
chr3 8906466 8906480 STAT1 JASPAR yes 70934028
chr3 8906466 8906481 STAT2 JASPAR yes 70934029
chr3 8906468 8906489 IRF1 JASPAR yes 70934030
chr3 8906470 8906485 IRF9 JASPAR yes 70934031
chr3 8906471 8906485 IRF7 JASPAR yes 70934032
chr3 8906472 8906486 STAT1 JASPAR yes 70934033
chr3 8906472 8906490 IRF2 JASPAR yes 70934034
chr3 8906492 8906503 NFE2L2 JASPAR yes 70934035
chr3 8906509 8906520 ESRRB JASPAR yes 70934036
chr3 8906521 8906527 ETS1 JASPAR yes 70934037
chr3 8906534 8906538 LFA1 TRANSFAC yes 70934038
chr3 8906534 8906548 TCF7L2 JASPAR yes 70934039
chr3 8906572 8906578 MAZ TRANSFAC yes 70934040
chr3 8906580 8906592 NHLH1 JASPAR yes 70934041
chr3 8906581 8906591 NHLH1 JASPAR yes 70934042
chr3 8906584 8906601 RARA JASPAR yes 70934043
chr3 8906596 8906600 ESR1 TRANSFAC yes 70934044
chr3 8906607 8906619 ZBTB7C JASPAR yes 70934045
chr3 8906646 8906665 CTCF JASPAR yes 70934046
chr3 8906661 8906673 TEAD1 JASPAR yes 70934047
chr3 8906663 8906673 TEAD1 JASPAR yes 70934048
chr3 8906669 8906678 HIC2 JASPAR yes 70934049
chr3 8906672 8906676 LFA1 TRANSFAC yes 70934050
chr3 8906685 8906704 CTCF JASPAR yes 70934051
chr3 8906696 8906700 LFA1 TRANSFAC yes 70934052
chr3 8906700 8906710 NFATC3 JASPAR yes 70934053
chr3 8906705 8906709 H1TF2 TRANSFAC yes 70934054
chr3 8906705 8906709 NFE TRANSFAC yes 70934055
chr3 8906705 8906709 SRF TRANSFAC yes 70934056
chr3 8906722 8906730 MEIS3 JASPAR yes 70934057
chr3 8906723 8906735 PKNOX1 JASPAR yes 70934058
chr3 8906723 8906735 TGIF1 JASPAR yes 70934059
chr3 8906723 8906735 TGIF2 JASPAR yes 70934060
chr3 8906734 8906748 TCF7L2 JASPAR yes 70934061
chr3 8906769 8906773 YY1 TRANSFAC yes 70934062
SNP sites on vista39882[chr3:8906303-8906783]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 8906361 rs182768597 C A
SPI1
6537060
chr3 8906457 rs193181441 T A,C
IRF1 NFY SPI1
6537061
chr3 8906556 rs17049669 G A
SPI1
6537062
chr3 8906651 rs114063223 C G,T
CTCF
6537063
chr3 8906705 rs116416184 T C
H1TF2 NFATC3 NFE SRF
6537064
chr3 8906712 rs532067961 T A no 6537065
chr3 8906756 rs79146213 G A no 6537066
chr3 8906783 rs568864271 C G no 6537067
Genes possibly regulated by vista39882[chr3:8906303-8906783]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 8792094 8811314 - OXTR ENSG00000180914.6 8811314 0.96 0.94 3375 5011
chr3 8817088 9005457 - RAD18 ENSG00000070950.5 9005457 0.83 0.99 3376 1326
Expression level of Genes
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miRNAs possibly regulated by vista39882[chr3:8906303-8906783]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results