EnhancerDB
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  3. vista39885[chr3:8978841-8979048]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39885[chr3:8978841-8979048]
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Tissue distribution of vista39885
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Transcription factor that possibly regulate vista39885[chr3:8978841-8979048]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 8978741 8979098 FOSL2 UCSC Txn Factor no Conserved 108528128
chr3 8978752 8979020 RFX5 UCSC Txn Factor no Conserved 108528129
chr3 8978754 8979099 EP300 UCSC Txn Factor no Conserved 108528130
chr3 8978755 8979011 FOS UCSC Txn Factor no Conserved 108528131
chr3 8978802 8979015 JUND UCSC Txn Factor no Conserved 108528132
chr3 8978861 8978874 SCRT2 JASPAR yes 322953
chr3 8978861 8978874 SCRT2 JASPAR yes 70934128
chr3 8978865 8978875 TFAP4 JASPAR yes 322954
chr3 8978865 8978875 TFAP4 JASPAR yes 70934129
chr3 8978868 8978879 NFE2L2 JASPAR yes 322955
chr3 8978868 8978879 NFE2L2 JASPAR yes 70934130
chr3 8978869 8978880 FOS JASPAR yes 322956
chr3 8978869 8978880 JUND JASPAR yes 322957
chr3 8978869 8978880 FOS JASPAR yes 70934131
chr3 8978869 8978880 JUND JASPAR yes 70934132
chr3 8978870 8978881 FOSL2 JASPAR yes 322958
chr3 8978870 8978881 JUNB JASPAR yes 322959
chr3 8978870 8978881 FOSL2 JASPAR yes 70934133
chr3 8978870 8978881 JUNB JASPAR yes 70934134
chr3 8978870 8978884 JUN JASPAR yes 322960
chr3 8978870 8978884 JUN JASPAR yes 70934135
chr3 8978871 8978877 JUN TRANSFAC yes 322961
chr3 8978871 8978877 JUN TRANSFAC yes 70934136
chr3 8978876 8978880 YY1 TRANSFAC yes 322962
chr3 8978876 8978880 YY1 TRANSFAC yes 70934137
chr3 8978879 8978894 FOXA1 JASPAR yes 322963
chr3 8978879 8978894 FOXA1 JASPAR yes 70934138
chr3 8978880 8978895 FOXP1 JASPAR yes 322964
chr3 8978880 8978895 FOXP1 JASPAR yes 70934139
chr3 8978881 8978892 FOXP2 JASPAR yes 322965
chr3 8978881 8978892 FOXP2 JASPAR yes 70934140
chr3 8978882 8978890 FOXD1 JASPAR yes 322966
chr3 8978882 8978890 FOXG1 JASPAR yes 322967
chr3 8978882 8978890 FOXO3 JASPAR yes 322968
chr3 8978882 8978890 FOXD1 JASPAR yes 70934141
chr3 8978882 8978890 FOXG1 JASPAR yes 70934142
chr3 8978882 8978890 FOXO3 JASPAR yes 70934143
chr3 8978883 8978890 FOXD2 JASPAR yes 322969
chr3 8978883 8978890 FOXI1 JASPAR yes 322970
chr3 8978883 8978890 FOXL1 JASPAR yes 322971
chr3 8978883 8978890 FOXO4 JASPAR yes 322972
chr3 8978883 8978890 FOXO6 JASPAR yes 322973
chr3 8978883 8978890 FOXP3 JASPAR yes 322974
chr3 8978883 8978890 FOXD2 JASPAR yes 70934144
chr3 8978883 8978890 FOXI1 JASPAR yes 70934145
chr3 8978883 8978890 FOXL1 JASPAR yes 70934146
chr3 8978883 8978890 FOXO4 JASPAR yes 70934147
chr3 8978883 8978890 FOXO6 JASPAR yes 70934148
chr3 8978883 8978890 FOXP3 JASPAR yes 70934149
chr3 8978883 8978891 FOXO3 JASPAR yes 322975
chr3 8978883 8978891 FOXO3 JASPAR yes 70934150
chr3 8978883 8978894 FOXA1 JASPAR yes 322976
chr3 8978883 8978894 FOXA1 JASPAR yes 70934151
chr3 8978903 8978917 JUN JASPAR yes 322977
chr3 8978903 8978917 JUN JASPAR yes 70934152
chr3 8978906 8978917 FOSL2 JASPAR yes 322978
chr3 8978906 8978917 JUNB JASPAR yes 322979
chr3 8978906 8978917 FOSL2 JASPAR yes 70934153
chr3 8978906 8978917 JUNB JASPAR yes 70934154
chr3 8978907 8978918 FOS JASPAR yes 322980
chr3 8978907 8978918 FOSL1 JASPAR yes 322981
chr3 8978907 8978918 JUND JASPAR yes 322982
chr3 8978907 8978918 NFE2 JASPAR yes 322983
chr3 8978907 8978918 FOS JASPAR yes 70934155
chr3 8978907 8978918 FOSL1 JASPAR yes 70934156
chr3 8978907 8978918 JUND JASPAR yes 70934157
chr3 8978907 8978918 NFE2 JASPAR yes 70934158
chr3 8978908 8978917 JDP2 JASPAR yes 322984
chr3 8978908 8978917 JDP2 JASPAR yes 70934159
chr3 8978908 8978922 JUN JASPAR yes 322985
chr3 8978908 8978922 JUN JASPAR yes 70934160
chr3 8978909 8978920 BATF JASPAR yes 322986
chr3 8978909 8978920 BATF JASPAR yes 70934161
chr3 8978914 8978918 YY1 TRANSFAC yes 322987
chr3 8978914 8978918 YY1 TRANSFAC yes 70934162
chr3 8978924 8978929 GATA1 TRANSFAC yes 322988
chr3 8978924 8978929 GATA1 TRANSFAC yes 70934163
chr3 8978931 8978943 FOXI1 JASPAR yes 322989
chr3 8978931 8978943 FOXI1 JASPAR yes 70934164
chr3 8978932 8978944 FOXC2 JASPAR yes 322990
chr3 8978932 8978944 FOXC2 JASPAR yes 70934165
chr3 8978934 8978938 YY1 TRANSFAC yes 322991
chr3 8978934 8978938 YY1 TRANSFAC yes 70934166
chr3 8978945 8978956 ESRRA JASPAR yes 322992
chr3 8978945 8978956 ESRRA JASPAR yes 70934167
chr3 8978972 8978982 RELA JASPAR yes 322993
chr3 8978972 8978982 RELA JASPAR yes 70934168
chr3 8979007 8979011 YY1 TRANSFAC yes 322994
chr3 8979007 8979011 YY1 TRANSFAC yes 70934169
chr3 8979010 8979021 CDX2 JASPAR yes 322995
chr3 8979010 8979021 CDX2 JASPAR yes 70934170
chr3 8979011 8979022 HOXA10 JASPAR yes 322996
chr3 8979011 8979022 HOXA10 JASPAR yes 70934171
chr3 8979012 8979021 CDX1 JASPAR yes 322997
chr3 8979012 8979021 CDX1 JASPAR yes 70934172
chr3 8979012 8979022 HOXA13 JASPAR yes 322998
chr3 8979012 8979022 HOXB13 JASPAR yes 322999
chr3 8979012 8979022 HOXD13 JASPAR yes 323000
chr3 8979012 8979022 HOXA13 JASPAR yes 70934173
chr3 8979012 8979022 HOXB13 JASPAR yes 70934174
chr3 8979012 8979022 HOXD13 JASPAR yes 70934175
chr3 8979031 8979049 NR3C1 JASPAR yes 323001
chr3 8979031 8979049 NR3C1 JASPAR yes 70934176
chr3 8979045 8979049 NFE TRANSFAC yes 323002
chr3 8979045 8979049 NFE TRANSFAC yes 70934177
SNP sites on vista39885[chr3:8978841-8979048]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 8978885 rs114071641 G A
EP300 FOS FOSL2 FOXA1 FOXD1 FOXD2 FOXG1 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP1 FOXP2 FOXP3 JUND RFX5
6537516
chr3 8978972 rs11714280 T C
EP300 FOS FOSL2 JUND RELA RFX5
6537517
chr3 8979029 rs78587561 C A,T
EP300 FOSL2
6537518
Genes possibly regulated by vista39885[chr3:8978841-8979048]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 8817088 9005457 - RAD18 ENSG00000070950.5 9005457 0.83 0.99 3376 73591
Expression level of Genes
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miRNAs possibly regulated by vista39885[chr3:8978841-8979048]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results