EnhancerDB
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  3. vista39887[chr3:9050336-9050687]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39887[chr3:9050336-9050687]
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Tissue distribution of vista39887
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Transcription factor that possibly regulate vista39887[chr3:9050336-9050687]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 9050339 9050357 SRF JASPAR yes 70934244
chr3 9050348 9050354 SOX10 JASPAR yes 70934245
chr3 9050365 9050375 TEAD1 JASPAR yes 70934246
chr3 9050365 9050375 TEAD4 JASPAR yes 70934247
chr3 9050365 9050377 TEAD1 JASPAR yes 70934248
chr3 9050366 9050374 TEAD3 JASPAR yes 70934249
chr3 9050370 9050390 ESR1 JASPAR yes 70934250
chr3 9050373 9050391 NR3C1 JASPAR yes 70934251
chr3 9050374 9050392 ESR2 JASPAR yes 70934252
chr3 9050375 9050390 ESR2 JASPAR yes 70934253
chr3 9050375 9050392 RXRA JASPAR yes 70934254
chr3 9050375 9050395 ESR1 JASPAR yes 70934255
chr3 9050407 9050427 ESR1 JASPAR yes 70934256
chr3 9050421 9050434 ZBTB18 JASPAR yes 70934257
chr3 9050450 9050467 RARA JASPAR yes 70934258
chr3 9050450 9050467 RXRA JASPAR yes 70934259
chr3 9050463 9050472 VENTX JASPAR yes 70934260
chr3 9050466 9050470 YY1 TRANSFAC yes 70934261
chr3 9050478 9050488 SREBF1 JASPAR yes 70934262
chr3 9050487 9050492 TFAP2A TRANSFAC yes 70934263
chr3 9050487 9050493 MZF1 JASPAR yes 70934264
chr3 9050511 9050522 NFE2 JASPAR yes 70934265
chr3 9050512 9050521 JDP2 JASPAR yes 70934266
chr3 9050520 9050535 NFYB JASPAR yes 70934267
chr3 9050527 9050531 H1TF2 TRANSFAC yes 70934268
chr3 9050527 9050531 NFE TRANSFAC yes 70934269
chr3 9050527 9050531 SRF TRANSFAC yes 70934270
chr3 9050539 9050553 PLAG1 JASPAR yes 70934271
chr3 9050562 9050566 YY1 TRANSFAC yes 70934272
chr3 9050571 9050576 ETS2 TRANSFAC yes 70934273
chr3 9050581 9050588 NFATC2 JASPAR yes 70934274
chr3 9050606 9050624 IRF2 JASPAR yes 70934275
chr3 9050608 9050619 CEBPB JASPAR yes 70934276
chr3 9050640 9050650 ELK1 JASPAR yes 70934277
chr3 9050642 9050651 ELK4 JASPAR yes 70934278
chr3 9050642 9050652 ELK1 JASPAR yes 70934279
chr3 9050642 9050652 ELK3 JASPAR yes 70934280
chr3 9050642 9050652 ETV1 JASPAR yes 70934281
chr3 9050642 9050652 ETV4 JASPAR yes 70934282
chr3 9050642 9050652 FEV JASPAR yes 70934283
chr3 9050642 9050652 GABPA JASPAR yes 70934284
chr3 9050644 9050650 ETS1 JASPAR yes 70934285
chr3 9050644 9050650 SPI1 JASPAR yes 70934286
chr3 9050654 9050675 IRF1 JASPAR yes 70934287
chr3 9050658 9050672 STAT1 JASPAR yes 70934288
chr3 9050658 9050676 IRF2 JASPAR yes 70934289
chr3 9050679 9050684 ETS2 TRANSFAC yes 70934290
SNP sites on vista39887[chr3:9050336-9050687]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 9050425 rs112315005 C T
ESR1 ZBTB18
6537761
chr3 9050457 rs114690757 G A
RARA RXRA
6537762
chr3 9050480 rs11715608 T C
SREBF1
6537763
chr3 9050589 rs113043448 C T no 6537764
chr3 9050604 rs370001233 A G no 6537765
chr3 9050645 rs149327474 C T
ELK1 ELK3 ELK4 ETS1 ETV1 ETV4 FEV GABPA SPI1
6537766
chr3 9050659 rs341788 C T
IRF1 IRF2 STAT1
6537767
chr3 9050660 rs73813248 G A
IRF1 IRF2 STAT1
6537768
Genes possibly regulated by vista39887[chr3:9050336-9050687]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 8817088 9005457 - RAD18 ENSG00000070950.5 9005457 0.83 0.99 3376 55121
Expression level of Genes
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miRNAs possibly regulated by vista39887[chr3:9050336-9050687]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results