EnhancerDB
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  3. vista39889[chr3:9143032-9143317]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39889[chr3:9143032-9143317]
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Tissue distribution of vista39889
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Transcription factor that possibly regulate vista39889[chr3:9143032-9143317]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 9142984 9143254 USF1 UCSC Txn Factor no Conserved 108528133
chr3 9143016 9143034 ESR2 JASPAR yes 327094
chr3 9143016 9143034 ESR2 JASPAR yes 70934340
chr3 9143018 9143033 ESR2 JASPAR yes 327096
chr3 9143018 9143033 ESR2 JASPAR yes 70934341
chr3 9143018 9143035 RXRA JASPAR yes 327097
chr3 9143018 9143035 RXRA JASPAR yes 70934342
chr3 9143018 9143038 ESR1 JASPAR yes 327098
chr3 9143018 9143038 ESR1 JASPAR yes 70934343
chr3 9143026 9143041 AR JASPAR yes 327100
chr3 9143026 9143041 AR JASPAR yes 70934344
chr3 9143042 9143057 TFAP2C JASPAR yes 327101
chr3 9143042 9143057 TFAP2C JASPAR yes 70934345
chr3 9143044 9143059 TFAP2A JASPAR yes 327102
chr3 9143044 9143059 TFAP2A JASPAR yes 70934346
chr3 9143095 9143110 RFX5 JASPAR yes 327103
chr3 9143095 9143110 RFX5 JASPAR yes 70934347
chr3 9143099 9143114 RUNX2 JASPAR yes 327104
chr3 9143099 9143114 RUNX2 JASPAR yes 70934348
chr3 9143125 9143136 USF2 JASPAR yes 327105
chr3 9143125 9143136 USF2 JASPAR yes 70934349
chr3 9143126 9143136 BHLHE40 JASPAR yes 327106
chr3 9143126 9143136 BHLHE41 JASPAR yes 327107
chr3 9143126 9143136 MLXIPL JASPAR yes 327108
chr3 9143126 9143136 MLX JASPAR yes 327109
chr3 9143126 9143136 SREBF2 JASPAR yes 327110
chr3 9143126 9143136 TFE3 JASPAR yes 327111
chr3 9143126 9143136 TFEB JASPAR yes 327112
chr3 9143126 9143136 TFEC JASPAR yes 327113
chr3 9143126 9143136 BHLHE40 JASPAR yes 70934350
chr3 9143126 9143136 BHLHE41 JASPAR yes 70934351
chr3 9143126 9143136 MLXIPL JASPAR yes 70934352
chr3 9143126 9143136 MLX JASPAR yes 70934353
chr3 9143126 9143136 SREBF2 JASPAR yes 70934354
chr3 9143126 9143136 TFE3 JASPAR yes 70934355
chr3 9143126 9143136 TFEB JASPAR yes 70934356
chr3 9143126 9143136 TFEC JASPAR yes 70934357
chr3 9143126 9143137 USF1 JASPAR yes 327114
chr3 9143126 9143137 USF2 JASPAR yes 327115
chr3 9143126 9143137 USF1 JASPAR yes 70934358
chr3 9143126 9143137 USF2 JASPAR yes 70934359
chr3 9143127 9143137 MAX JASPAR yes 327116
chr3 9143127 9143137 MAX JASPAR yes 70934360
chr3 9143128 9143133 MYC TRANSFAC yes 327117
chr3 9143128 9143133 USF1 TRANSFAC yes 327118
chr3 9143128 9143133 USF2 TRANSFAC yes 327119
chr3 9143128 9143133 MYC TRANSFAC yes 70934361
chr3 9143128 9143133 USF1 TRANSFAC yes 70934362
chr3 9143128 9143133 USF2 TRANSFAC yes 70934363
chr3 9143128 9143141 NR2F1 JASPAR yes 327120
chr3 9143128 9143141 NR2F1 JASPAR yes 70934364
chr3 9143139 9143154 NFYB JASPAR yes 327121
chr3 9143139 9143154 NFYB JASPAR yes 70934365
chr3 9143141 9143157 NFYA JASPAR yes 327122
chr3 9143141 9143157 NFYA JASPAR yes 70934366
chr3 9143142 9143160 NFYA JASPAR yes 327123
chr3 9143142 9143160 NFYA JASPAR yes 70934367
chr3 9143146 9143150 H1TF2 TRANSFAC yes 327124
chr3 9143146 9143150 NFE TRANSFAC yes 327125
chr3 9143146 9143150 SRF TRANSFAC yes 327126
chr3 9143146 9143150 H1TF2 TRANSFAC yes 70934368
chr3 9143146 9143150 NFE TRANSFAC yes 70934369
chr3 9143146 9143150 SRF TRANSFAC yes 70934370
chr3 9143163 9143168 GATA2 JASPAR yes 327127
chr3 9143163 9143168 GATA2 JASPAR yes 70934371
chr3 9143167 9143182 STAT1 JASPAR yes 327128
chr3 9143167 9143182 STAT1 JASPAR yes 70934372
chr3 9143169 9143180 STAT1 JASPAR yes 327129
chr3 9143169 9143180 STAT3 JASPAR yes 327130
chr3 9143169 9143180 STAT1 JASPAR yes 70934373
chr3 9143169 9143180 STAT3 JASPAR yes 70934374
chr3 9143170 9143178 STAT6 TRANSFAC yes 327131
chr3 9143170 9143178 STAT6 TRANSFAC yes 70934375
chr3 9143196 9143203 PEA3 TRANSFAC yes 327132
chr3 9143196 9143203 PEA3 TRANSFAC yes 70934376
chr3 9143220 9143225 SP1 TRANSFAC yes 327133
chr3 9143220 9143225 SP1 TRANSFAC yes 70934377
chr3 9143220 9143234 PLAG1 JASPAR yes 327134
chr3 9143220 9143234 PLAG1 JASPAR yes 70934378
chr3 9143240 9143259 CTCF JASPAR yes 327135
chr3 9143240 9143259 CTCF JASPAR yes 70934379
chr3 9143241 9143253 INSM1 JASPAR yes 327136
chr3 9143241 9143253 INSM1 JASPAR yes 70934380
chr3 9143241 9143256 ZIC4 JASPAR yes 327137
chr3 9143241 9143256 ZIC4 JASPAR yes 70934381
chr3 9143249 9143254 SP1 TRANSFAC yes 327138
chr3 9143249 9143254 SP1 TRANSFAC yes 70934382
chr3 9143279 9143294 RUNX2 JASPAR yes 327139
chr3 9143279 9143294 RUNX2 JASPAR yes 70934383
chr3 9143280 9143286 MZF1 JASPAR yes 327140
chr3 9143280 9143286 MZF1 JASPAR yes 70934384
chr3 9143288 9143302 SPIC JASPAR yes 327141
chr3 9143288 9143302 SPIC JASPAR yes 70934385
chr3 9143289 9143303 STAT1 JASPAR yes 327142
chr3 9143289 9143303 STAT1 JASPAR yes 70934386
SNP sites on vista39889[chr3:9143032-9143317]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 9143193 rs6773896 C G,T
USF1
6538067
chr3 9143241 rs387684 C A,T
CTCF INSM1 USF1 ZIC4
6538068
chr3 9143249 rs190278447 G A
CTCF INSM1 SP1 USF1 ZIC4
6538069
chr3 9143287 rs556769847 C CA
RUNX2
6538070
Genes possibly regulated by vista39889[chr3:9143032-9143317]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista39889[chr3:9143032-9143317]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results