EnhancerDB
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  3. vista39895[chr3:9289090-9289417]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39895[chr3:9289090-9289417]
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Tissue distribution of vista39895
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Transcription factor that possibly regulate vista39895[chr3:9289090-9289417]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 9289150 9289171 IRF1 JASPAR yes 70934544
chr3 9289152 9289162 NFATC3 JASPAR yes 70934545
chr3 9289154 9289161 NFATC2 JASPAR yes 70934546
chr3 9289154 9289169 STAT2 JASPAR yes 70934547
chr3 9289155 9289170 FOXP1 JASPAR yes 70934548
chr3 9289158 9289169 FOXP2 JASPAR yes 70934549
chr3 9289169 9289179 SP1 JASPAR yes 70934550
chr3 9289170 9289180 SP1 JASPAR yes 70934551
chr3 9289170 9289191 ZNF263 JASPAR yes 70934552
chr3 9289173 9289186 TFAP2A JASPAR yes 70934553
chr3 9289211 9289225 PAX6 JASPAR yes 70934554
chr3 9289225 9289237 NHLH1 JASPAR yes 70934555
chr3 9289226 9289236 NHLH1 JASPAR yes 70934556
chr3 9289236 9289245 HIC2 JASPAR yes 70934557
chr3 9289243 9289258 ZIC3 JASPAR yes 70934558
chr3 9289244 9289255 E2F4 JASPAR yes 70934559
chr3 9289279 9289297 ESR2 JASPAR yes 338592
chr3 9289279 9289297 ESR2 JASPAR yes 70934560
chr3 9289279 9289299 PPARG JASPAR yes 338593
chr3 9289279 9289299 PPARG JASPAR yes 70934561
chr3 9289280 9289286 ESR1 TRANSFAC yes 338594
chr3 9289280 9289286 ESR1 TRANSFAC yes 70934562
chr3 9289282 9289286 ESR1 TRANSFAC yes 338595
chr3 9289282 9289286 ESR1 TRANSFAC yes 70934563
chr3 9289296 9289301 MYC TRANSFAC yes 338596
chr3 9289296 9289301 MYC TRANSFAC yes 70934564
chr3 9289316 9289325 SNAI2 JASPAR yes 338597
chr3 9289316 9289325 SNAI2 JASPAR yes 70934565
chr3 9289316 9289326 ID4 JASPAR yes 338598
chr3 9289316 9289326 NHLH1 JASPAR yes 338599
chr3 9289316 9289326 TCF3 JASPAR yes 338600
chr3 9289316 9289326 TCF4 JASPAR yes 338601
chr3 9289316 9289326 ID4 JASPAR yes 70934566
chr3 9289316 9289326 NHLH1 JASPAR yes 70934567
chr3 9289316 9289326 TCF3 JASPAR yes 70934568
chr3 9289316 9289326 TCF4 JASPAR yes 70934569
chr3 9289318 9289327 ZEB1 JASPAR yes 338602
chr3 9289318 9289327 ZEB1 JASPAR yes 70934570
chr3 9289319 9289327 TBX5 JASPAR yes 338603
chr3 9289319 9289327 TBX5 JASPAR yes 70934571
chr3 9289380 9289383 MYB TRANSFAC yes 338604
chr3 9289380 9289383 MYB TRANSFAC yes 70934572
chr3 9289389 9289395 GATA3 JASPAR yes 338605
chr3 9289389 9289395 GATA3 JASPAR yes 70934573
chr3 9289399 9289409 HINFP JASPAR yes 338606
chr3 9289399 9289409 HINFP JASPAR yes 70934574
chr3 9289399 9289411 HINFP JASPAR yes 338607
chr3 9289399 9289411 HINFP JASPAR yes 70934575
chr3 9289402 9289406 H4TF2 TRANSFAC yes 338608
chr3 9289402 9289406 H4TF2 TRANSFAC yes 70934576
chr3 9289417 9289421 YY1 TRANSFAC yes 338609
chr3 9289417 9289421 YY1 TRANSFAC yes 70934577
SNP sites on vista39895[chr3:9289090-9289417]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 9289166 rs185978084 C A,T
FOXP1 FOXP2 IRF1 STAT2
6539166
chr3 9289220 rs572746219 C T
PAX6
6539167
chr3 9289393 rs142882673 T C
GATA3
6539168
Genes possibly regulated by vista39895[chr3:9289090-9289417]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista39895[chr3:9289090-9289417]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results