EnhancerDB
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  3. vista39906[chr3:10202652-10202802]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39906[chr3:10202652-10202802]
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Tissue distribution of vista39906
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Transcription factor that possibly regulate vista39906[chr3:10202652-10202802]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10202653 10202664 FOSL2 JASPAR yes 70935079
chr3 10202681 10202685 YY1 TRANSFAC yes 70935080
chr3 10202694 10202705 HOXA10 JASPAR yes 70935081
chr3 10202695 10202705 ALX3 JASPAR yes 70935082
chr3 10202695 10202705 GSX2 JASPAR yes 70935083
chr3 10202695 10202705 MNX1 JASPAR yes 70935084
chr3 10202696 10202704 LMX1A JASPAR yes 70935085
chr3 10202696 10202704 LMX1B JASPAR yes 70935086
chr3 10202696 10202704 NKX6-1 JASPAR yes 70935087
chr3 10202696 10202704 NKX6-2 JASPAR yes 70935088
chr3 10202696 10202704 VAX1 JASPAR yes 70935089
chr3 10202696 10202704 VAX2 JASPAR yes 70935090
chr3 10202696 10202704 VSX1 JASPAR yes 70935091
chr3 10202696 10202704 VSX2 JASPAR yes 70935092
chr3 10202701 10202713 POU2F1 JASPAR yes 70935093
chr3 10202701 10202714 POU3F3 JASPAR yes 70935094
chr3 10202701 10202715 POU1F1 JASPAR yes 70935095
chr3 10202702 10202714 POU3F1 JASPAR yes 70935096
chr3 10202702 10202714 POU3F2 JASPAR yes 70935097
chr3 10202702 10202715 POU2F2 JASPAR yes 70935098
chr3 10202703 10202711 POU2F1 TRANSFAC yes 70935099
chr3 10202703 10202712 POU3F4 JASPAR yes 70935100
chr3 10202703 10202712 POU5F1B JASPAR yes 70935101
chr3 10202704 10202711 POU2F1 TRANSFAC yes 70935102
chr3 10202704 10202711 POU2F2 TRANSFAC yes 70935103
chr3 10202706 10202716 NOTO JASPAR yes 70935104
chr3 10202716 10202720 LFA1 TRANSFAC yes 70935105
chr3 10202725 10202738 HSF1 JASPAR yes 70935106
chr3 10202729 10202744 HSF1 JASPAR yes 70935107
chr3 10202730 10202743 HSF1 JASPAR yes 70935108
chr3 10202730 10202743 HSF2 JASPAR yes 70935109
chr3 10202730 10202743 HSF4 JASPAR yes 70935110
chr3 10202744 10202754 SP1 JASPAR yes 70935111
chr3 10202745 10202750 SP1 TRANSFAC yes 70935112
chr3 10202758 10202777 RFX2 JASPAR yes 70935113
chr3 10202760 10202775 RFX5 JASPAR yes 70935114
chr3 10202762 10202778 RFX2 JASPAR yes 70935115
chr3 10202762 10202778 RFX3 JASPAR yes 70935116
chr3 10202762 10202778 RFX4 JASPAR yes 70935117
chr3 10202762 10202778 RFX5 JASPAR yes 70935118
chr3 10202763 10202782 RFX2 JASPAR yes 70935119
SNP sites on vista39906[chr3:10202652-10202802]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10202657 rs416289 T C
FOSL2
6541601
chr3 10202668 rs35293469 C A no 6541602
chr3 10202674 rs113816620 T C no 6541603
chr3 10202682 rs34027372 C T
YY1
6541604
Genes possibly regulated by vista39906[chr3:10202652-10202802]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10123001 10149915 - FANCD2OS ENSG00000163705.8 10149915 0.98 1.0 3399 47263
chr3 10157276 10168874 + BRK1 ENSG00000254999.2 10157276 0.52 0.99 3400 54624
chr3 10182692 10193904 + VHL ENSG00000134086.7 10182692 0.76 0.99 3401 80040
chr3 10206549 10285427 + IRAK2 ENSG00000134070.4 10206549 0.82 0.99 3402 96253
chr3 10289707 10322902 + TATDN2 ENSG00000157014.6 10289707 0.67 0.97 3403 13095
chr3 10291056 10327480 + RP11-438J1.1 ENSG00000272410.1 10291056 0.88 0.81 3404 11746
Expression level of Genes
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miRNAs possibly regulated by vista39906[chr3:10202652-10202802]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results