EnhancerDB
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  3. vista39908[chr3:10215234-10216150]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39908[chr3:10215234-10216150]
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Tissue distribution of vista39908
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Transcription factor that possibly regulate vista39908[chr3:10215234-10216150]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10214999 10215326 JUND UCSC Txn Factor no Conserved 108528149
chr3 10214999 10215326 JUND UCSC Txn Factor no Conserved 108528150
chr3 10215867 10216191 CEBPB UCSC Txn Factor no Conserved 108528151
chr3 10215265 10215279 PLAG1 JASPAR yes 360410
chr3 10215265 10215279 PLAG1 JASPAR yes 70935134
chr3 10215278 10215284 ZNF354C JASPAR yes 360411
chr3 10215278 10215284 ZNF354C JASPAR yes 70935135
chr3 10215288 10215295 JUN TRANSFAC yes 360412
chr3 10215288 10215295 JUN TRANSFAC yes 70935136
chr3 10215315 10215336 IRF1 JASPAR yes 360413
chr3 10215315 10215336 IRF1 JASPAR yes 70935137
chr3 10215317 10215332 IRF9 JASPAR yes 360414
chr3 10215317 10215332 IRF9 JASPAR yes 70935138
chr3 10215318 10215332 IRF7 JASPAR yes 360415
chr3 10215318 10215332 IRF8 JASPAR yes 360416
chr3 10215318 10215332 IRF7 JASPAR yes 70935139
chr3 10215318 10215332 IRF8 JASPAR yes 70935140
chr3 10215319 10215325 GATA3 JASPAR yes 360417
chr3 10215319 10215325 GATA3 JASPAR yes 70935141
chr3 10215319 10215333 STAT1 JASPAR yes 360418
chr3 10215319 10215333 STAT1 JASPAR yes 70935142
chr3 10215319 10215334 PRDM1 JASPAR yes 360419
chr3 10215319 10215334 STAT2 JASPAR yes 360420
chr3 10215319 10215334 PRDM1 JASPAR yes 70935143
chr3 10215319 10215334 STAT2 JASPAR yes 70935144
chr3 10215320 10215332 IRF1 JASPAR yes 360421
chr3 10215320 10215332 IRF1 JASPAR yes 70935145
chr3 10215338 10215353 MEF2C JASPAR yes 360422
chr3 10215338 10215353 MEF2C JASPAR yes 70935146
chr3 10215339 10215354 MEF2A JASPAR yes 360423
chr3 10215339 10215354 MEF2A JASPAR yes 70935147
chr3 10215340 10215352 MEF2A JASPAR yes 360424
chr3 10215340 10215352 MEF2B JASPAR yes 360425
chr3 10215340 10215352 MEF2D JASPAR yes 360426
chr3 10215340 10215352 MEF2A JASPAR yes 70935148
chr3 10215340 10215352 MEF2B JASPAR yes 70935149
chr3 10215340 10215352 MEF2D JASPAR yes 70935150
chr3 10215372 10215384 HES5 JASPAR yes 360427
chr3 10215372 10215384 HES7 JASPAR yes 360428
chr3 10215372 10215384 HES5 JASPAR yes 70935151
chr3 10215372 10215384 HES7 JASPAR yes 70935152
chr3 10215384 10215400 RFX4 JASPAR yes 360429
chr3 10215384 10215400 RFX4 JASPAR yes 70935153
chr3 10215460 10215470 SREBF1 JASPAR yes 360430
chr3 10215460 10215470 SREBF2 JASPAR yes 360431
chr3 10215460 10215470 SREBF1 JASPAR yes 70935154
chr3 10215460 10215470 SREBF2 JASPAR yes 70935155
chr3 10215481 10215500 PAX5 JASPAR yes 360432
chr3 10215481 10215500 PAX5 JASPAR yes 70935156
chr3 10215483 10215487 LFA1 TRANSFAC yes 360433
chr3 10215483 10215487 LFA1 TRANSFAC yes 70935157
chr3 10215494 10215506 PROX1 JASPAR yes 360434
chr3 10215494 10215506 PROX1 JASPAR yes 70935158
chr3 10215510 10215525 FOXP1 JASPAR yes 360435
chr3 10215510 10215525 FOXP1 JASPAR yes 70935159
chr3 10215513 10215525 FOXI1 JASPAR yes 360436
chr3 10215513 10215525 FOXI1 JASPAR yes 70935160
chr3 10215519 10215533 ONECUT2 JASPAR yes 360437
chr3 10215519 10215533 ONECUT3 JASPAR yes 360438
chr3 10215519 10215533 ONECUT2 JASPAR yes 70935161
chr3 10215519 10215533 ONECUT3 JASPAR yes 70935162
chr3 10215519 10215534 FOXP1 JASPAR yes 360439
chr3 10215519 10215534 FOXP1 JASPAR yes 70935163
chr3 10215520 10215535 FOXA1 JASPAR yes 360440
chr3 10215520 10215535 FOXA1 JASPAR yes 70935164
chr3 10215521 10215532 FOXB1 JASPAR yes 360441
chr3 10215521 10215532 FOXC1 JASPAR yes 360442
chr3 10215521 10215532 FOXB1 JASPAR yes 70935165
chr3 10215521 10215532 FOXC1 JASPAR yes 70935166
chr3 10215521 10215533 FOXC2 JASPAR yes 360443
chr3 10215521 10215533 FOXC2 JASPAR yes 70935167
chr3 10215522 10215534 FOXI1 JASPAR yes 360444
chr3 10215522 10215534 FOXI1 JASPAR yes 70935168
chr3 10215540 10215550 BARHL2 JASPAR yes 360445
chr3 10215540 10215550 BARHL2 JASPAR yes 70935169
chr3 10215540 10215558 MAFF JASPAR yes 360446
chr3 10215540 10215558 MAFF JASPAR yes 70935170
chr3 10215542 10215553 NRL JASPAR yes 360447
chr3 10215542 10215553 NRL JASPAR yes 70935171
chr3 10215542 10215557 MAFK JASPAR yes 360448
chr3 10215542 10215557 MAFK JASPAR yes 70935172
chr3 10215542 10215560 NFYA JASPAR yes 360449
chr3 10215542 10215560 NFYA JASPAR yes 70935173
chr3 10215542 10215563 MAFG JASPAR yes 360450
chr3 10215542 10215563 MAFG JASPAR yes 70935174
chr3 10215545 10215561 NFYA JASPAR yes 360451
chr3 10215545 10215561 NFYA JASPAR yes 70935175
chr3 10215548 10215563 NFYB JASPAR yes 360452
chr3 10215548 10215563 NFYB JASPAR yes 70935176
chr3 10215550 10215555 NFY TRANSFAC yes 360453
chr3 10215550 10215555 NFY TRANSFAC yes 70935177
chr3 10215554 10215558 ESR1 TRANSFAC yes 360454
chr3 10215554 10215558 ESR1 TRANSFAC yes 70935178
chr3 10215575 10215580 MYC TRANSFAC yes 360455
chr3 10215575 10215580 MYC TRANSFAC yes 70935179
chr3 10215619 10215640 IRF1 JASPAR yes 360456
chr3 10215619 10215640 IRF1 JASPAR yes 70935180
chr3 10215622 10215636 SPI1 JASPAR yes 360457
chr3 10215622 10215636 SPI1 JASPAR yes 70935181
chr3 10215656 10215661 ETS2 TRANSFAC yes 360458
chr3 10215656 10215661 ETS2 TRANSFAC yes 70935182
chr3 10215703 10215717 GLIS2 JASPAR yes 360459
chr3 10215703 10215717 GLIS3 JASPAR yes 360460
chr3 10215703 10215717 GLIS2 JASPAR yes 70935183
chr3 10215703 10215717 GLIS3 JASPAR yes 70935184
chr3 10215721 10215730 TFAP2A JASPAR yes 360461
chr3 10215721 10215730 TFAP2A JASPAR yes 70935185
chr3 10215730 10215745 FOXP1 JASPAR yes 360462
chr3 10215730 10215745 FOXP1 JASPAR yes 70935186
chr3 10215731 10215742 FOXP2 JASPAR yes 360463
chr3 10215731 10215742 FOXP2 JASPAR yes 70935187
chr3 10215733 10215741 FOXO3 JASPAR yes 360464
chr3 10215733 10215741 FOXO3 JASPAR yes 70935188
chr3 10215740 10215751 NFIL3 JASPAR yes 360465
chr3 10215740 10215751 NFIL3 JASPAR yes 70935189
chr3 10215740 10215754 ATF7 JASPAR yes 360466
chr3 10215740 10215754 BATF3 JASPAR yes 360467
chr3 10215740 10215754 ATF7 JASPAR yes 70935190
chr3 10215740 10215754 BATF3 JASPAR yes 70935191
chr3 10215741 10215745 YY1 TRANSFAC yes 360468
chr3 10215741 10215745 YY1 TRANSFAC yes 70935192
chr3 10215741 10215753 DBP JASPAR yes 360469
chr3 10215741 10215753 HLF JASPAR yes 360470
chr3 10215741 10215753 JDP2 JASPAR yes 360471
chr3 10215741 10215753 TEF JASPAR yes 360472
chr3 10215741 10215753 DBP JASPAR yes 70935193
chr3 10215741 10215753 HLF JASPAR yes 70935194
chr3 10215741 10215753 JDP2 JASPAR yes 70935195
chr3 10215741 10215753 TEF JASPAR yes 70935196
chr3 10215741 10215754 ATF4 JASPAR yes 360473
chr3 10215741 10215754 ATF4 JASPAR yes 70935197
chr3 10215741 10215756 JUND JASPAR yes 360474
chr3 10215741 10215756 JUND JASPAR yes 70935198
chr3 10215742 10215755 JUN JASPAR yes 360475
chr3 10215742 10215755 JUN JASPAR yes 70935199
chr3 10215743 10215750 JUN TRANSFAC yes 360476
chr3 10215743 10215750 JUN TRANSFAC yes 70935200
chr3 10215743 10215751 CREB1 JASPAR yes 360477
chr3 10215743 10215751 GMEB2 JASPAR yes 360478
chr3 10215743 10215751 CREB1 JASPAR yes 70935201
chr3 10215743 10215751 GMEB2 JASPAR yes 70935202
chr3 10215743 10215763 PPARG JASPAR yes 360479
chr3 10215743 10215763 PPARG JASPAR yes 70935203
chr3 10215744 10215756 CREB1 JASPAR yes 360480
chr3 10215744 10215756 CREB1 JASPAR yes 70935204
chr3 10215745 10215750 ATF1 TRANSFAC yes 360481
chr3 10215745 10215750 ATF1 TRANSFAC yes 70935205
chr3 10215754 10215768 GLIS3 JASPAR yes 360482
chr3 10215754 10215768 GLIS3 JASPAR yes 70935206
chr3 10215777 10215783 ZNF354C JASPAR yes 360483
chr3 10215777 10215783 ZNF354C JASPAR yes 70935207
chr3 10215785 10215789 H1TF2 TRANSFAC yes 360484
chr3 10215785 10215789 NFE TRANSFAC yes 360485
chr3 10215785 10215789 SRF TRANSFAC yes 360486
chr3 10215785 10215789 H1TF2 TRANSFAC yes 70935208
chr3 10215785 10215789 NFE TRANSFAC yes 70935209
chr3 10215785 10215789 SRF TRANSFAC yes 70935210
chr3 10215790 10215806 GLIS1 JASPAR yes 360487
chr3 10215790 10215806 GLIS1 JASPAR yes 70935211
chr3 10215791 10215805 GLIS2 JASPAR yes 360488
chr3 10215791 10215805 GLIS3 JASPAR yes 360489
chr3 10215791 10215805 GLIS2 JASPAR yes 70935212
chr3 10215791 10215805 GLIS3 JASPAR yes 70935213
chr3 10215795 10215805 ZNF740 JASPAR yes 360490
chr3 10215795 10215805 ZNF740 JASPAR yes 70935214
chr3 10215807 10215811 H4TF2 TRANSFAC yes 360491
chr3 10215807 10215811 H4TF2 TRANSFAC yes 70935215
chr3 10215810 10215818 EHF JASPAR yes 360492
chr3 10215810 10215818 EHF JASPAR yes 70935216
chr3 10215812 10215817 ETS2 TRANSFAC yes 360493
chr3 10215812 10215817 ETS2 TRANSFAC yes 70935217
chr3 10215816 10215823 NFATC2 JASPAR yes 360494
chr3 10215816 10215823 NFATC2 JASPAR yes 70935218
chr3 10215861 10215871 TFAP4 JASPAR yes 360495
chr3 10215861 10215871 TFAP4 JASPAR yes 70935219
chr3 10215864 10215878 BATF3 JASPAR yes 360496
chr3 10215864 10215878 BATF3 JASPAR yes 70935220
chr3 10215865 10215877 JDP2 JASPAR yes 360497
chr3 10215865 10215877 JDP2 JASPAR yes 70935221
chr3 10215865 10215880 JUND JASPAR yes 360498
chr3 10215865 10215880 JUND JASPAR yes 70935222
chr3 10215866 10215879 JUN JASPAR yes 360499
chr3 10215866 10215879 JUN JASPAR yes 70935223
chr3 10215867 10215874 JUN TRANSFAC yes 360500
chr3 10215867 10215874 JUN TRANSFAC yes 70935224
chr3 10215896 10215908 INSM1 JASPAR yes 360501
chr3 10215896 10215908 INSM1 JASPAR yes 70935225
chr3 10215900 10215910 RELA JASPAR yes 360502
chr3 10215900 10215910 REL JASPAR yes 360503
chr3 10215900 10215910 RELA JASPAR yes 70935226
chr3 10215900 10215910 REL JASPAR yes 70935227
chr3 10215900 10215911 NFKB1 JASPAR yes 360504
chr3 10215900 10215911 NFKB1 JASPAR yes 70935228
chr3 10215911 10215918 JUN TRANSFAC yes 360505
chr3 10215911 10215918 JUN TRANSFAC yes 70935229
chr3 10215916 10215919 MYB TRANSFAC yes 360506
chr3 10215916 10215919 MYB TRANSFAC yes 70935230
chr3 10215931 10215941 NFKB1 JASPAR yes 360507
chr3 10215931 10215941 NFKB1 JASPAR yes 70935231
chr3 10215931 10215942 NFKB1 JASPAR yes 360508
chr3 10215931 10215942 NFKB1 JASPAR yes 70935232
chr3 10215932 10215947 PRDM1 JASPAR yes 360509
chr3 10215932 10215947 PRDM1 JASPAR yes 70935233
chr3 10215934 10215944 NFATC3 JASPAR yes 360510
chr3 10215934 10215944 NFATC3 JASPAR yes 70935234
chr3 10215943 10215953 ALX3 JASPAR yes 360511
chr3 10215943 10215953 EN2 JASPAR yes 360512
chr3 10215943 10215953 ESX1 JASPAR yes 360513
chr3 10215943 10215953 GBX2 JASPAR yes 360514
chr3 10215943 10215953 GSX1 JASPAR yes 360515
chr3 10215943 10215953 GSX2 JASPAR yes 360516
chr3 10215943 10215953 LBX2 JASPAR yes 360517
chr3 10215943 10215953 LHX2 JASPAR yes 360518
chr3 10215943 10215953 ALX3 JASPAR yes 70935235
chr3 10215943 10215953 EN2 JASPAR yes 70935236
chr3 10215943 10215953 ESX1 JASPAR yes 70935237
chr3 10215943 10215953 GBX2 JASPAR yes 70935238
chr3 10215943 10215953 GSX1 JASPAR yes 70935239
chr3 10215943 10215953 GSX2 JASPAR yes 70935240
chr3 10215943 10215953 LBX2 JASPAR yes 70935241
chr3 10215943 10215953 LHX2 JASPAR yes 70935242
chr3 10215944 10215952 BARX1 JASPAR yes 360519
chr3 10215944 10215952 BSX JASPAR yes 360520
chr3 10215944 10215952 DLX6 JASPAR yes 360521
chr3 10215944 10215952 ISX JASPAR yes 360522
chr3 10215944 10215952 LBX1 JASPAR yes 360523
chr3 10215944 10215952 LHX9 JASPAR yes 360524
chr3 10215944 10215952 MSX1 JASPAR yes 360525
chr3 10215944 10215952 MSX2 JASPAR yes 360526
chr3 10215944 10215952 NKX6-2 JASPAR yes 360527
chr3 10215944 10215952 PRRX1 JASPAR yes 360528
chr3 10215944 10215952 RAX2 JASPAR yes 360529
chr3 10215944 10215952 SHOX JASPAR yes 360530
chr3 10215944 10215952 UNCX JASPAR yes 360531
chr3 10215944 10215952 BARX1 JASPAR yes 70935243
chr3 10215944 10215952 BSX JASPAR yes 70935244
chr3 10215944 10215952 DLX6 JASPAR yes 70935245
chr3 10215944 10215952 ISX JASPAR yes 70935246
chr3 10215944 10215952 LBX1 JASPAR yes 70935247
chr3 10215944 10215952 LHX9 JASPAR yes 70935248
chr3 10215944 10215952 MSX1 JASPAR yes 70935249
chr3 10215944 10215952 MSX2 JASPAR yes 70935250
chr3 10215944 10215952 NKX6-2 JASPAR yes 70935251
chr3 10215944 10215952 PRRX1 JASPAR yes 70935252
chr3 10215944 10215952 RAX2 JASPAR yes 70935253
chr3 10215944 10215952 SHOX JASPAR yes 70935254
chr3 10215944 10215952 UNCX JASPAR yes 70935255
chr3 10215950 10215954 LFA1 TRANSFAC yes 360532
chr3 10215950 10215954 LFA1 TRANSFAC yes 70935256
chr3 10215986 10215990 NFE TRANSFAC yes 360533
chr3 10215986 10215990 NFE TRANSFAC yes 70935257
chr3 10215998 10216002 YY1 TRANSFAC yes 360534
chr3 10215998 10216002 YY1 TRANSFAC yes 70935258
chr3 10216019 10216030 CEBPA JASPAR yes 360535
chr3 10216019 10216030 CEBPA JASPAR yes 70935259
chr3 10216019 10216031 HLF JASPAR yes 360536
chr3 10216019 10216031 HLF JASPAR yes 70935260
chr3 10216020 10216030 CEBPB JASPAR yes 360537
chr3 10216020 10216030 CEBPD JASPAR yes 360538
chr3 10216020 10216030 CEBPE JASPAR yes 360539
chr3 10216020 10216030 CEBPG JASPAR yes 360540
chr3 10216020 10216030 CEBPB JASPAR yes 70935261
chr3 10216020 10216030 CEBPD JASPAR yes 70935262
chr3 10216020 10216030 CEBPE JASPAR yes 70935263
chr3 10216020 10216030 CEBPG JASPAR yes 70935264
chr3 10216020 10216031 CEBPB JASPAR yes 360541
chr3 10216020 10216031 CEBPB JASPAR yes 70935265
chr3 10216032 10216036 ESR1 TRANSFAC yes 360542
chr3 10216032 10216036 ESR1 TRANSFAC yes 70935266
chr3 10216060 10216072 GLI2 JASPAR yes 360543
chr3 10216060 10216072 ZBTB7C JASPAR yes 360544
chr3 10216060 10216072 GLI2 JASPAR yes 70935267
chr3 10216060 10216072 ZBTB7C JASPAR yes 70935268
chr3 10216061 10216073 ZBTB7A JASPAR yes 360545
chr3 10216061 10216073 ZBTB7A JASPAR yes 70935269
chr3 10216066 10216070 H4TF2 TRANSFAC yes 360546
chr3 10216066 10216070 H4TF2 TRANSFAC yes 70935270
chr3 10216075 10216078 MYB TRANSFAC yes 360547
chr3 10216075 10216078 MYB TRANSFAC yes 70935271
chr3 10216089 10216104 HNF4A JASPAR yes 360548
chr3 10216089 10216104 HNF4A JASPAR yes 70935272
chr3 10216105 10216114 HIC2 JASPAR yes 360549
chr3 10216105 10216114 HIC2 JASPAR yes 70935273
chr3 10216108 10216112 LFA1 TRANSFAC yes 360550
chr3 10216108 10216112 LFA1 TRANSFAC yes 70935274
chr3 10216126 10216132 LEF1 TRANSFAC yes 360551
chr3 10216126 10216132 SOX10 JASPAR yes 360552
chr3 10216126 10216132 LEF1 TRANSFAC yes 70935275
chr3 10216126 10216132 SOX10 JASPAR yes 70935276
chr3 10216137 10216141 H4TF2 TRANSFAC yes 360553
chr3 10216137 10216141 H4TF2 TRANSFAC yes 70935277
chr3 10216150 10216171 ZNF263 JASPAR yes 360554
chr3 10216150 10216171 ZNF263 JASPAR yes 70935278
SNP sites on vista39908[chr3:10215234-10216150]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10215261 rs566062950 T C
JUND
6541728
chr3 10215275 rs113058568 G T
JUND PLAG1
6541729
chr3 10215503 rs75251665 C T
PROX1
6541730
chr3 10215669 rs140814290 G T no 6541731
chr3 10215747 rs542988658 C T
ATF1 ATF4 ATF7 BATF3 CREB1 DBP GMEB2 HLF JDP2 JUN JUND NFIL3 PPARG TEF
6541732
chr3 10215748 rs115810014 G A
ATF1 ATF4 ATF7 BATF3 CREB1 DBP GMEB2 HLF JDP2 JUN JUND NFIL3 PPARG TEF
6541733
chr3 10215950 rs2619508 T G
ALX3 BARX1 BSX CEBPB DLX6 EN2 ESX1 GBX2 GSX1 GSX2 ISX LBX1 LBX2 LFA1 LHX2 LHX9 MSX1 MSX2 NKX6-2 PRRX1 RAX2 SHOX UNCX
6541734
Genes possibly regulated by vista39908[chr3:10215234-10216150]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10123001 10149915 - FANCD2OS ENSG00000163705.8 10149915 0.98 1.0 3399 34681
chr3 10157276 10168874 + BRK1 ENSG00000254999.2 10157276 0.52 0.99 3400 42042
chr3 10182692 10193904 + VHL ENSG00000134086.7 10182692 0.76 0.99 3401 67458
chr3 10206549 10285427 + IRAK2 ENSG00000134070.4 10206549 0.82 0.99 3402 91315
chr3 10289707 10322902 + TATDN2 ENSG00000157014.6 10289707 0.67 0.97 3403 26443
chr3 10291056 10327480 + RP11-438J1.1 ENSG00000272410.1 10291056 0.88 0.81 3404 25094
Expression level of Genes
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miRNAs possibly regulated by vista39908[chr3:10215234-10216150]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results