EnhancerDB
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  3. vista39917[chr3:10240437-10240684]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39917[chr3:10240437-10240684]
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Tissue distribution of vista39917
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Transcription factor that possibly regulate vista39917[chr3:10240437-10240684]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10240437 10240451 TCF7L2 JASPAR yes 363705
chr3 10240437 10240451 TCF7L2 JASPAR yes 70935765
chr3 10240437 10240452 LEF1 JASPAR yes 363706
chr3 10240437 10240452 LEF1 JASPAR yes 70935766
chr3 10240441 10240447 TCF1 TRANSFAC yes 363707
chr3 10240441 10240447 TCF1 TRANSFAC yes 70935767
chr3 10240446 10240452 HiNF-A TRANSFAC yes 363708
chr3 10240446 10240452 HiNF-A TRANSFAC yes 70935768
chr3 10240484 10240496 TAL1 JASPAR yes 363709
chr3 10240484 10240496 TAL1 JASPAR yes 70935769
chr3 10240486 10240496 MYF6 JASPAR yes 363710
chr3 10240486 10240496 NEUROG2 JASPAR yes 363711
chr3 10240486 10240496 MYF6 JASPAR yes 70935770
chr3 10240486 10240496 NEUROG2 JASPAR yes 70935771
chr3 10240486 10240498 TAL1 JASPAR yes 363712
chr3 10240486 10240498 TAL1 JASPAR yes 70935772
chr3 10240535 10240542 JUN TRANSFAC yes 363713
chr3 10240535 10240542 JUN TRANSFAC yes 70935773
chr3 10240557 10240565 EHF JASPAR yes 363714
chr3 10240557 10240565 EHF JASPAR yes 70935774
chr3 10240573 10240587 RORA JASPAR yes 363715
chr3 10240573 10240587 RORA JASPAR yes 70935775
chr3 10240606 10240610 NFE TRANSFAC yes 363716
chr3 10240606 10240610 NFE TRANSFAC yes 70935776
chr3 10240607 10240612 GATA2 JASPAR yes 363717
chr3 10240607 10240612 GATA2 JASPAR yes 70935777
chr3 10240660 10240668 GATA3 JASPAR yes 70935778
chr3 10240668 10240682 PLAG1 JASPAR yes 70935779
chr3 10240677 10240682 TFAP2A TRANSFAC yes 70935780
chr3 10240677 10240683 MZF1 JASPAR yes 70935781
SNP sites on vista39917[chr3:10240437-10240684]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10240489 rs114904613 C T
MYF6 NEUROG2 TAL1
6542072
chr3 10240602 rs13326478 T C no 6542073
chr3 10240648 rs76831261 C T no 6542074
chr3 10240658 rs11916301 A G no 6542075
Genes possibly regulated by vista39917[chr3:10240437-10240684]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10123001 10149915 - FANCD2OS ENSG00000163705.8 10149915 0.98 1.0 3399 9478
chr3 10157276 10168874 + BRK1 ENSG00000254999.2 10157276 0.52 0.99 3400 16839
chr3 10182692 10193904 + VHL ENSG00000134086.7 10182692 0.76 0.99 3401 42255
chr3 10206549 10285427 + IRAK2 ENSG00000134070.4 10206549 0.82 0.99 3402 66112
chr3 10289707 10322902 + TATDN2 ENSG00000157014.6 10289707 0.67 0.97 3403 50977
chr3 10291056 10327480 + RP11-438J1.1 ENSG00000272410.1 10291056 0.88 0.81 3404 49628
chr3 10327359 10334631 - GHRL ENSG00000157017.11 10334631 0.98 0.99 3405 6053
Expression level of Genes
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miRNAs possibly regulated by vista39917[chr3:10240437-10240684]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results