EnhancerDB
  1. Home
  2. Enhancers
  3. vista39918[chr3:10240691-10241307]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39918[chr3:10240691-10241307]
Back to top
Tissue distribution of vista39918
Back to top
Transcription factor that possibly regulate vista39918[chr3:10240691-10241307]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10240746 10241183 RELA UCSC Txn Factor no Conserved 108528168
chr3 10240713 10240717 YY1 TRANSFAC yes 70935782
chr3 10240727 10240732 TFAP2A TRANSFAC yes 70935783
chr3 10240727 10240733 MZF1 JASPAR yes 70935784
chr3 10240727 10240738 NFKB1 JASPAR yes 70935785
chr3 10240728 10240738 NFKB1 JASPAR yes 70935786
chr3 10240728 10240739 NFKB1 JASPAR yes 70935787
chr3 10240754 10240759 ETS2 TRANSFAC yes 70935788
chr3 10240765 10240778 ZBTB18 JASPAR yes 70935789
chr3 10240823 10240834 E2F1 JASPAR yes 70935790
chr3 10240847 10240852 GATA2 JASPAR yes 70935791
chr3 10240864 10240885 ZNF263 JASPAR yes 70935792
chr3 10240867 10240877 SP1 JASPAR yes 70935793
chr3 10240867 10240888 ZNF263 JASPAR yes 70935794
chr3 10240868 10240875 CEBPA TRANSFAC yes 70935795
chr3 10240870 10240880 MZF1 JASPAR yes 70935796
chr3 10240877 10240884 SPIB JASPAR yes 70935797
chr3 10240877 10240888 FLI1 JASPAR yes 70935798
chr3 10240934 10240950 ZNF143 JASPAR yes 70935799
chr3 10240951 10240961 RELA JASPAR yes 70935800
chr3 10240951 10240961 REL JASPAR yes 70935801
chr3 10240951 10240962 NFKB1 JASPAR yes 70935802
chr3 10240952 10240962 NFKB1 JASPAR yes 70935803
chr3 10240952 10240962 RELA JASPAR yes 70935804
chr3 10240952 10240963 NFKB1 JASPAR yes 70935805
chr3 10240956 10240976 TBX19 JASPAR yes 70935806
chr3 10240973 10240984 ETV2 JASPAR yes 70935807
chr3 10240974 10240985 FLI1 JASPAR yes 70935808
chr3 10240975 10240980 ETS2 TRANSFAC yes 70935809
chr3 10240975 10240983 FEV JASPAR yes 70935810
chr3 10240976 10240991 HNF1A JASPAR yes 70935811
chr3 10240977 10240990 HNF1B JASPAR yes 70935812
chr3 10241032 10241038 NFIC JASPAR yes 70935813
chr3 10241034 10241044 TFE3 JASPAR yes 70935814
chr3 10241034 10241044 TFEB JASPAR yes 70935815
chr3 10241034 10241044 TFEC JASPAR yes 70935816
chr3 10241034 10241045 USF1 JASPAR yes 70935817
chr3 10241034 10241045 USF2 JASPAR yes 70935818
chr3 10241035 10241045 MAX JASPAR yes 70935819
chr3 10241039 10241047 NR4A2 JASPAR yes 70935820
chr3 10241054 10241058 YY1 TRANSFAC yes 70935821
chr3 10241058 10241061 MYB TRANSFAC yes 70935822
chr3 10241073 10241088 STAT2 JASPAR yes 70935823
chr3 10241076 10241089 JUN JASPAR yes 70935824
chr3 10241125 10241140 TP53 JASPAR yes 70935825
chr3 10241132 10241144 NHLH1 JASPAR yes 70935826
chr3 10241133 10241143 NHLH1 JASPAR yes 70935827
chr3 10241135 10241154 REST JASPAR yes 70935828
chr3 10241151 10241168 NR3C1 JASPAR yes 70935829
chr3 10241151 10241168 NR3C2 JASPAR yes 70935830
chr3 10241166 10241181 RFX5 JASPAR yes 70935831
chr3 10241180 10241195 MEF2C JASPAR yes 70935832
chr3 10241196 10241208 PBX1 JASPAR yes 70935833
chr3 10241202 10241211 NKX2-8 JASPAR yes 70935834
chr3 10241202 10241212 NKX2-3 JASPAR yes 70935835
chr3 10241209 10241214 ETS2 TRANSFAC yes 70935836
chr3 10241259 10241274 HNF4A JASPAR yes 70935837
chr3 10241260 10241274 RXRB JASPAR yes 70935838
chr3 10241260 10241274 RXRG JASPAR yes 70935839
chr3 10241260 10241275 HNF4G JASPAR yes 70935840
chr3 10241260 10241275 LEF1 JASPAR yes 70935841
chr3 10241260 10241275 NR2C2 JASPAR yes 70935842
chr3 10241264 10241270 LEF1 TRANSFAC yes 70935843
chr3 10241264 10241270 TCF4 TRANSFAC yes 70935844
chr3 10241266 10241274 RHOXF1 JASPAR yes 70935845
chr3 10241268 10241282 EBF1 JASPAR yes 70935846
chr3 10241270 10241281 EBF1 JASPAR yes 70935847
SNP sites on vista39918[chr3:10240691-10241307]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10240745 rs73026543 G A,C no 6542076
chr3 10240757 rs145346805 G A
ETS2 RELA
6542077
chr3 10240827 rs574110267 G A
E2F1 RELA
6542078
chr3 10240835 rs535318638 G A
RELA
6542079
chr3 10240922 rs147758218 G T
RELA
6542080
chr3 10241037 rs113732611 C T
MAX NFIC RELA TFE3 TFEB TFEC USF1 USF2
6542081
chr3 10241221 rs6763870 G A no 6542082
chr3 10241223 rs696319 T G no 6542083
Genes possibly regulated by vista39918[chr3:10240691-10241307]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10123001 10149915 - FANCD2OS ENSG00000163705.8 10149915 0.98 1.0 3399 9224
chr3 10157276 10168874 + BRK1 ENSG00000254999.2 10157276 0.52 0.99 3400 16585
chr3 10182692 10193904 + VHL ENSG00000134086.7 10182692 0.76 0.99 3401 42001
chr3 10206549 10285427 + IRAK2 ENSG00000134070.4 10206549 0.82 0.99 3402 65858
chr3 10289707 10322902 + TATDN2 ENSG00000157014.6 10289707 0.67 0.97 3403 51600
chr3 10291056 10327480 + RP11-438J1.1 ENSG00000272410.1 10291056 0.88 0.81 3404 50251
chr3 10327359 10334631 - GHRL ENSG00000157017.11 10334631 0.98 0.99 3405 6676
Expression level of Genes
Back to top
miRNAs possibly regulated by vista39918[chr3:10240691-10241307]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results