EnhancerDB
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  3. vista39919[chr3:10246146-10246525]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39919[chr3:10246146-10246525]
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Tissue distribution of vista39919
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Transcription factor that possibly regulate vista39919[chr3:10246146-10246525]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10246142 10246146 YY1 TRANSFAC yes 364114
chr3 10246142 10246146 YY1 TRANSFAC yes 70935848
chr3 10246177 10246192 RFX5 JASPAR yes 364115
chr3 10246177 10246192 RFX5 JASPAR yes 70935849
chr3 10246209 10246219 SREBF1 JASPAR yes 364116
chr3 10246209 10246219 SREBF2 JASPAR yes 364117
chr3 10246209 10246219 SREBF1 JASPAR yes 70935850
chr3 10246209 10246219 SREBF2 JASPAR yes 70935851
chr3 10246218 10246222 ESR1 TRANSFAC yes 364118
chr3 10246218 10246222 ESR1 TRANSFAC yes 70935852
chr3 10246241 10246245 ESR1 TRANSFAC yes 364119
chr3 10246241 10246245 ESR1 TRANSFAC yes 70935853
chr3 10246244 10246256 YY1 JASPAR yes 364120
chr3 10246244 10246256 YY1 JASPAR yes 70935854
chr3 10246248 10246259 CEBPB JASPAR yes 364121
chr3 10246248 10246259 CEBPB JASPAR yes 70935855
chr3 10246265 10246280 MEF2C JASPAR yes 364122
chr3 10246265 10246280 MEF2C JASPAR yes 70935856
chr3 10246266 10246281 MEF2A JASPAR yes 364123
chr3 10246266 10246281 MEF2A JASPAR yes 70935857
chr3 10246267 10246279 MEF2A JASPAR yes 364124
chr3 10246267 10246279 MEF2B JASPAR yes 364125
chr3 10246267 10246279 MEF2D JASPAR yes 364126
chr3 10246267 10246279 MEF2A JASPAR yes 70935858
chr3 10246267 10246279 MEF2B JASPAR yes 70935859
chr3 10246267 10246279 MEF2D JASPAR yes 70935860
chr3 10246268 10246278 MEF2A JASPAR yes 364127
chr3 10246268 10246278 MEF2A JASPAR yes 70935861
chr3 10246273 10246287 POU1F1 JASPAR yes 364128
chr3 10246273 10246287 POU1F1 JASPAR yes 70935862
chr3 10246275 10246279 TEAD2 TRANSFAC yes 364129
chr3 10246275 10246279 TEAD2 TRANSFAC yes 70935863
chr3 10246275 10246280 TBP TRANSFAC yes 364130
chr3 10246275 10246280 TBP TRANSFAC yes 70935864
chr3 10246275 10246281 TFIID TRANSFAC yes 364131
chr3 10246275 10246281 TFIID TRANSFAC yes 70935865
chr3 10246358 10246368 SP1 JASPAR yes 364132
chr3 10246358 10246368 SP1 JASPAR yes 70935866
chr3 10246358 10246379 ZNF263 JASPAR yes 364133
chr3 10246358 10246379 ZNF263 JASPAR yes 70935867
chr3 10246360 10246365 SP1 TRANSFAC yes 364134
chr3 10246360 10246365 SP1 TRANSFAC yes 70935868
chr3 10246360 10246372 HINFP JASPAR yes 364135
chr3 10246360 10246372 HINFP JASPAR yes 70935869
chr3 10246365 10246382 ESR1 JASPAR yes 364136
chr3 10246365 10246382 ESR1 JASPAR yes 70935870
chr3 10246384 10246394 SREBF1 JASPAR yes 364137
chr3 10246384 10246394 SREBF2 JASPAR yes 364138
chr3 10246384 10246394 SREBF1 JASPAR yes 70935871
chr3 10246384 10246394 SREBF2 JASPAR yes 70935872
chr3 10246427 10246442 MEF2C JASPAR yes 364139
chr3 10246427 10246442 MEF2C JASPAR yes 70935873
chr3 10246430 10246444 IRF7 JASPAR yes 364140
chr3 10246430 10246444 IRF7 JASPAR yes 70935874
chr3 10246432 10246444 IRF1 JASPAR yes 364141
chr3 10246432 10246444 IRF1 JASPAR yes 70935875
chr3 10246432 10246447 STAT2 JASPAR yes 364142
chr3 10246432 10246447 STAT2 JASPAR yes 70935876
chr3 10246433 10246448 FOXP1 JASPAR yes 364143
chr3 10246433 10246448 FOXP1 JASPAR yes 70935877
chr3 10246435 10246455 RREB1 JASPAR yes 364144
chr3 10246435 10246455 RREB1 JASPAR yes 70935878
chr3 10246437 10246452 FOXP1 JASPAR yes 364145
chr3 10246437 10246452 FOXP1 JASPAR yes 70935879
chr3 10246438 10246449 FOXA1 JASPAR yes 364146
chr3 10246438 10246449 FOXA1 JASPAR yes 70935880
chr3 10246439 10246451 FOXC2 JASPAR yes 364147
chr3 10246439 10246451 FOXC2 JASPAR yes 70935881
chr3 10246440 10246452 FOXI1 JASPAR yes 364148
chr3 10246440 10246452 FOXI1 JASPAR yes 70935882
chr3 10246442 10246457 FOXP1 JASPAR yes 364149
chr3 10246442 10246457 FOXP1 JASPAR yes 70935883
chr3 10246453 10246474 IRF1 JASPAR yes 364150
chr3 10246453 10246474 IRF1 JASPAR yes 70935884
chr3 10246454 10246475 IRF1 JASPAR yes 364151
chr3 10246454 10246475 IRF1 JASPAR yes 70935885
chr3 10246458 10246473 STAT2 JASPAR yes 364152
chr3 10246458 10246473 STAT2 JASPAR yes 70935886
chr3 10246468 10246489 IRF1 JASPAR yes 364153
chr3 10246468 10246489 IRF1 JASPAR yes 70935887
chr3 10246470 10246485 IRF9 JASPAR yes 364154
chr3 10246470 10246485 IRF9 JASPAR yes 70935888
chr3 10246471 10246485 IRF7 JASPAR yes 364155
chr3 10246471 10246485 IRF8 JASPAR yes 364156
chr3 10246471 10246485 IRF7 JASPAR yes 70935889
chr3 10246471 10246485 IRF8 JASPAR yes 70935890
chr3 10246472 10246486 STAT1 JASPAR yes 364157
chr3 10246472 10246486 STAT1 JASPAR yes 70935891
chr3 10246472 10246487 PRDM1 JASPAR yes 364158
chr3 10246472 10246487 STAT2 JASPAR yes 364159
chr3 10246472 10246487 PRDM1 JASPAR yes 70935892
chr3 10246472 10246487 STAT2 JASPAR yes 70935893
chr3 10246479 10246494 HSF1 JASPAR yes 364160
chr3 10246479 10246494 HSF1 JASPAR yes 70935894
chr3 10246480 10246493 HSF1 JASPAR yes 364161
chr3 10246480 10246493 HSF2 JASPAR yes 364162
chr3 10246480 10246493 HSF4 JASPAR yes 364163
chr3 10246480 10246493 HSF1 JASPAR yes 70935895
chr3 10246480 10246493 HSF2 JASPAR yes 70935896
chr3 10246480 10246493 HSF4 JASPAR yes 70935897
chr3 10246484 10246499 HSF1 JASPAR yes 364164
chr3 10246484 10246499 HSF1 JASPAR yes 70935898
chr3 10246485 10246498 HSF2 JASPAR yes 364165
chr3 10246485 10246498 HSF2 JASPAR yes 70935899
chr3 10246494 10246498 YY1 TRANSFAC yes 364166
chr3 10246494 10246498 YY1 TRANSFAC yes 70935900
chr3 10246495 10246504 POU3F4 JASPAR yes 364167
chr3 10246495 10246504 POU5F1B JASPAR yes 364168
chr3 10246495 10246504 POU3F4 JASPAR yes 70935901
chr3 10246495 10246504 POU5F1B JASPAR yes 70935902
chr3 10246502 10246510 FEV JASPAR yes 364169
chr3 10246502 10246510 FEV JASPAR yes 70935903
chr3 10246511 10246526 FOXP1 JASPAR yes 364170
chr3 10246511 10246526 FOXP1 JASPAR yes 70935904
SNP sites on vista39919[chr3:10246146-10246525]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10246252 rs187967422 G A
CEBPB YY1
6542123
chr3 10246364 rs113812169 C T
HINFP SP1 ZNF263
6542124
Genes possibly regulated by vista39919[chr3:10246146-10246525]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10123001 10149915 - FANCD2OS ENSG00000163705.8 10149915 0.98 1.0 3399 3769
chr3 10157276 10168874 + BRK1 ENSG00000254999.2 10157276 0.52 0.99 3400 11130
chr3 10182692 10193904 + VHL ENSG00000134086.7 10182692 0.76 0.99 3401 36546
chr3 10206549 10285427 + IRAK2 ENSG00000134070.4 10206549 0.82 0.99 3402 60403
chr3 10289707 10322902 + TATDN2 ENSG00000157014.6 10289707 0.67 0.97 3403 56818
chr3 10291056 10327480 + RP11-438J1.1 ENSG00000272410.1 10291056 0.88 0.81 3404 55469
chr3 10327359 10334631 - GHRL ENSG00000157017.11 10334631 0.98 0.99 3405 11894
Expression level of Genes
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miRNAs possibly regulated by vista39919[chr3:10246146-10246525]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results