EnhancerDB
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  3. vista39921[chr3:10265421-10265646]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39921[chr3:10265421-10265646]
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Tissue distribution of vista39921
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Transcription factor that possibly regulate vista39921[chr3:10265421-10265646]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10265412 10265683 RUNX3 UCSC Txn Factor no Conserved 108528171
chr3 10265462 10265666 SPI1 UCSC Txn Factor no Conserved 108528172
chr3 10265443 10265446 MYB TRANSFAC yes 365531
chr3 10265443 10265446 MYB TRANSFAC yes 70935934
chr3 10265478 10265484 NFE2 TRANSFAC yes 365532
chr3 10265478 10265484 NFE2 TRANSFAC yes 70935935
chr3 10265478 10265493 HNF4A JASPAR yes 365533
chr3 10265478 10265493 HNF4A JASPAR yes 70935936
chr3 10265479 10265492 TFAP2A JASPAR yes 365534
chr3 10265479 10265492 TFAP2B JASPAR yes 365535
chr3 10265479 10265492 TFAP2C JASPAR yes 365536
chr3 10265479 10265492 TFAP2A JASPAR yes 70935937
chr3 10265479 10265492 TFAP2B JASPAR yes 70935938
chr3 10265479 10265492 TFAP2C JASPAR yes 70935939
chr3 10265479 10265494 HNF4G JASPAR yes 365537
chr3 10265479 10265494 HNF4G JASPAR yes 70935940
chr3 10265480 10265494 PLAG1 JASPAR yes 365538
chr3 10265480 10265494 PLAG1 JASPAR yes 70935941
chr3 10265481 10265492 EBF1 JASPAR yes 365539
chr3 10265481 10265492 EBF1 JASPAR yes 70935942
chr3 10265490 10265511 ZNF263 JASPAR yes 365540
chr3 10265490 10265511 ZNF263 JASPAR yes 70935943
chr3 10265515 10265530 HNF4A JASPAR yes 365541
chr3 10265515 10265530 HNF4A JASPAR yes 70935944
chr3 10265516 10265530 RXRG JASPAR yes 365542
chr3 10265516 10265530 RXRG JASPAR yes 70935945
chr3 10265516 10265531 HNF4G JASPAR yes 365543
chr3 10265516 10265531 HNF4G JASPAR yes 70935946
chr3 10265524 10265535 FLI1 JASPAR yes 365544
chr3 10265524 10265535 FLI1 JASPAR yes 70935947
chr3 10265525 10265535 ETV6 JASPAR yes 365545
chr3 10265525 10265535 ETV6 JASPAR yes 70935948
chr3 10265525 10265538 ELF1 JASPAR yes 365546
chr3 10265525 10265538 ELF1 JASPAR yes 70935949
chr3 10265526 10265533 SPI1 JASPAR yes 365547
chr3 10265526 10265533 SPI1 JASPAR yes 70935950
chr3 10265526 10265534 EHF JASPAR yes 365548
chr3 10265526 10265534 EHF JASPAR yes 70935951
chr3 10265528 10265535 SPIB JASPAR yes 365549
chr3 10265528 10265535 SPIB JASPAR yes 70935952
chr3 10265537 10265552 RUNX2 JASPAR yes 365550
chr3 10265537 10265552 RUNX2 JASPAR yes 70935953
chr3 10265551 10265555 NFE TRANSFAC yes 365551
chr3 10265551 10265555 NFE TRANSFAC yes 70935954
chr3 10265551 10265564 SMAD2 JASPAR yes 365552
chr3 10265551 10265564 SMAD2 JASPAR yes 70935955
chr3 10265555 10265559 NFE TRANSFAC yes 365553
chr3 10265555 10265559 NFE TRANSFAC yes 70935956
chr3 10265584 10265595 FOS JASPAR yes 365554
chr3 10265584 10265595 FOSL1 JASPAR yes 365555
chr3 10265584 10265595 JUND JASPAR yes 365556
chr3 10265584 10265595 FOS JASPAR yes 70935957
chr3 10265584 10265595 FOSL1 JASPAR yes 70935958
chr3 10265584 10265595 JUND JASPAR yes 70935959
chr3 10265585 10265596 FOSL2 JASPAR yes 365557
chr3 10265585 10265596 JUNB JASPAR yes 365558
chr3 10265585 10265596 FOSL2 JASPAR yes 70935960
chr3 10265585 10265596 JUNB JASPAR yes 70935961
chr3 10265585 10265599 JUN JASPAR yes 365559
chr3 10265585 10265599 JUN JASPAR yes 70935962
chr3 10265590 10265604 RXRB JASPAR yes 365560
chr3 10265590 10265604 RXRG JASPAR yes 365561
chr3 10265590 10265604 RXRB JASPAR yes 70935963
chr3 10265590 10265604 RXRG JASPAR yes 70935964
chr3 10265590 10265605 NR2C2 JASPAR yes 365562
chr3 10265590 10265605 NR2C2 JASPAR yes 70935965
chr3 10265596 10265605 THAP1 JASPAR yes 365563
chr3 10265596 10265605 THAP1 JASPAR yes 70935966
chr3 10265597 10265609 TFAP2A JASPAR yes 365564
chr3 10265597 10265609 TFAP2B JASPAR yes 365565
chr3 10265597 10265609 TFAP2C JASPAR yes 365566
chr3 10265597 10265609 TFAP2A JASPAR yes 70935967
chr3 10265597 10265609 TFAP2B JASPAR yes 70935968
chr3 10265597 10265609 TFAP2C JASPAR yes 70935969
chr3 10265631 10265644 SMAD2 JASPAR yes 365567
chr3 10265631 10265644 SMAD2 JASPAR yes 70935970
chr3 10265635 10265650 HSF1 JASPAR yes 365568
chr3 10265635 10265650 HSF1 JASPAR yes 70935971
chr3 10265636 10265648 NHLH1 JASPAR yes 365569
chr3 10265636 10265648 NHLH1 JASPAR yes 70935972
chr3 10265637 10265647 TFAP4 JASPAR yes 365570
chr3 10265637 10265647 TFAP4 JASPAR yes 70935973
chr3 10265637 10265649 TAL1 JASPAR yes 365571
chr3 10265637 10265649 TAL1 JASPAR yes 70935974
chr3 10265646 10265653 SPIB JASPAR yes 365572
chr3 10265646 10265653 SPIB JASPAR yes 70935975
SNP sites on vista39921[chr3:10265421-10265646]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10265484 rs144950945 C T
EBF1 HNF4A HNF4G NFE2 PLAG1 RUNX3 SPI1 TFAP2A TFAP2B TFAP2C
6542285
chr3 10265546 rs148671409 AGTCTCCT A
RUNX2 RUNX3 SPI1
6542286
Genes possibly regulated by vista39921[chr3:10265421-10265646]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10182692 10193904 + VHL ENSG00000134086.7 10182692 0.76 0.99 3401 17271
chr3 10206549 10285427 + IRAK2 ENSG00000134070.4 10206549 0.82 0.99 3402 41128
chr3 10289707 10322902 + TATDN2 ENSG00000157014.6 10289707 0.67 0.97 3403 75939
chr3 10291056 10327480 + RP11-438J1.1 ENSG00000272410.1 10291056 0.88 0.81 3404 74590
chr3 10327359 10334631 - GHRL ENSG00000157017.11 10334631 0.98 0.99 3405 31015
chr3 10334815 10362862 - SEC13 ENSG00000157020.13 10362862 0.62 0.99 3406 2784
Expression level of Genes
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miRNAs possibly regulated by vista39921[chr3:10265421-10265646]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results