EnhancerDB
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  3. vista39922[chr3:10266595-10266861]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39922[chr3:10266595-10266861]
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Tissue distribution of vista39922
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Transcription factor that possibly regulate vista39922[chr3:10266595-10266861]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10266432 10266972 EP300 UCSC Txn Factor no Conserved 108528173
chr3 10266451 10266747 HNF4A UCSC Txn Factor no Conserved 108528174
chr3 10266478 10267074 NFIC UCSC Txn Factor no Conserved 108528175
chr3 10266505 10266694 HNF4G UCSC Txn Factor no Conserved 108528176
chr3 10266553 10266848 FOXA1 UCSC Txn Factor no Conserved 108528177
chr3 10266565 10266773 FOXA2 UCSC Txn Factor no Conserved 108528178
chr3 10266589 10266969 CTCF UCSC Txn Factor no Conserved 108528179
chr3 10266632 10266932 SMC3 UCSC Txn Factor no Conserved 108528180
chr3 10266650 10266886 RAD21 UCSC Txn Factor no Conserved 108528181
chr3 10266586 10266602 SOX8 JASPAR yes 365751
chr3 10266586 10266602 SOX8 JASPAR yes 70935976
chr3 10266608 10266625 RXRA JASPAR yes 365752
chr3 10266608 10266625 RXRA JASPAR yes 70935977
chr3 10266609 10266627 ESR2 JASPAR yes 365753
chr3 10266609 10266627 ESR2 JASPAR yes 70935978
chr3 10266610 10266625 ESR2 JASPAR yes 365754
chr3 10266610 10266625 ESR2 JASPAR yes 70935979
chr3 10266615 10266628 NR2F1 JASPAR yes 365755
chr3 10266615 10266628 NR2F1 JASPAR yes 70935980
chr3 10266618 10266626 NR4A2 JASPAR yes 365756
chr3 10266618 10266626 NR4A2 JASPAR yes 70935981
chr3 10266619 10266629 RORA JASPAR yes 365757
chr3 10266619 10266629 RORA JASPAR yes 70935982
chr3 10266626 10266630 TEAD2 TRANSFAC yes 365758
chr3 10266626 10266630 TEAD2 TRANSFAC yes 70935983
chr3 10266626 10266631 TBP TRANSFAC yes 365759
chr3 10266626 10266631 TBP TRANSFAC yes 70935984
chr3 10266636 10266650 TLX1 JASPAR yes 365760
chr3 10266636 10266650 TLX1 JASPAR yes 70935985
chr3 10266662 10266666 LFA1 TRANSFAC yes 365761
chr3 10266662 10266666 LFA1 TRANSFAC yes 70935986
chr3 10266662 10266677 AR JASPAR yes 365762
chr3 10266662 10266677 AR JASPAR yes 70935987
chr3 10266663 10266676 ELF1 JASPAR yes 365763
chr3 10266663 10266676 ELF1 JASPAR yes 70935988
chr3 10266666 10266676 ERF JASPAR yes 365764
chr3 10266666 10266676 ERG JASPAR yes 365765
chr3 10266666 10266676 ETS1 JASPAR yes 365766
chr3 10266666 10266676 ETV3 JASPAR yes 365767
chr3 10266666 10266676 FEV JASPAR yes 365768
chr3 10266666 10266676 FLI1 JASPAR yes 365769
chr3 10266666 10266676 GABPA JASPAR yes 365770
chr3 10266666 10266676 ERF JASPAR yes 70935989
chr3 10266666 10266676 ERG JASPAR yes 70935990
chr3 10266666 10266676 ETS1 JASPAR yes 70935991
chr3 10266666 10266676 ETV3 JASPAR yes 70935992
chr3 10266666 10266676 FEV JASPAR yes 70935993
chr3 10266666 10266676 FLI1 JASPAR yes 70935994
chr3 10266666 10266676 GABPA JASPAR yes 70935995
chr3 10266666 10266677 FLI1 JASPAR yes 365771
chr3 10266666 10266677 FLI1 JASPAR yes 70935996
chr3 10266667 10266675 EHF JASPAR yes 365772
chr3 10266667 10266675 FEV JASPAR yes 365773
chr3 10266667 10266675 EHF JASPAR yes 70935997
chr3 10266667 10266675 FEV JASPAR yes 70935998
chr3 10266668 10266675 SPI1 JASPAR yes 365774
chr3 10266668 10266675 SPI1 JASPAR yes 70935999
chr3 10266674 10266689 FOXA1 JASPAR yes 365775
chr3 10266674 10266689 FOXA1 JASPAR yes 70936000
chr3 10266675 10266681 LEF1 TRANSFAC yes 365776
chr3 10266675 10266681 SOX10 JASPAR yes 365777
chr3 10266675 10266681 LEF1 TRANSFAC yes 70936001
chr3 10266675 10266681 SOX10 JASPAR yes 70936002
chr3 10266675 10266690 FOXP1 JASPAR yes 365778
chr3 10266675 10266690 FOXP1 JASPAR yes 70936003
chr3 10266676 10266687 FOXP2 JASPAR yes 365779
chr3 10266676 10266687 FOXP2 JASPAR yes 70936004
chr3 10266676 10266688 FOXC2 JASPAR yes 365780
chr3 10266676 10266688 FOXC2 JASPAR yes 70936005
chr3 10266677 10266685 FOXG1 JASPAR yes 365781
chr3 10266677 10266685 FOXO3 JASPAR yes 365782
chr3 10266677 10266685 FOXG1 JASPAR yes 70936006
chr3 10266677 10266685 FOXO3 JASPAR yes 70936007
chr3 10266677 10266688 FOXC1 JASPAR yes 365783
chr3 10266677 10266688 FOXC1 JASPAR yes 70936008
chr3 10266678 10266689 FOXA1 JASPAR yes 365784
chr3 10266678 10266689 FOXH1 JASPAR yes 365785
chr3 10266678 10266689 FOXA1 JASPAR yes 70936009
chr3 10266678 10266689 FOXH1 JASPAR yes 70936010
chr3 10266681 10266692 BATF JASPAR yes 365786
chr3 10266681 10266692 BATF JASPAR yes 70936011
chr3 10266686 10266690 YY1 TRANSFAC yes 365787
chr3 10266686 10266690 YY1 TRANSFAC yes 70936012
chr3 10266700 10266704 NFE TRANSFAC yes 365788
chr3 10266700 10266704 NFE TRANSFAC yes 70936013
chr3 10266704 10266719 STAT1 JASPAR yes 365789
chr3 10266704 10266719 STAT1 JASPAR yes 70936014
chr3 10266705 10266713 EHF JASPAR yes 365790
chr3 10266705 10266713 EHF JASPAR yes 70936015
chr3 10266706 10266717 STAT1 JASPAR yes 365791
chr3 10266706 10266717 STAT3 JASPAR yes 365792
chr3 10266706 10266717 STAT1 JASPAR yes 70936016
chr3 10266706 10266717 STAT3 JASPAR yes 70936017
chr3 10266721 10266725 NFE TRANSFAC yes 365793
chr3 10266721 10266725 NFE TRANSFAC yes 70936018
chr3 10266749 10266753 NFE TRANSFAC yes 365794
chr3 10266749 10266753 NFE TRANSFAC yes 70936019
chr3 10266767 10266786 CTCF JASPAR yes 365795
chr3 10266767 10266786 CTCF JASPAR yes 70936020
chr3 10266777 10266796 CTCF JASPAR yes 365796
chr3 10266777 10266796 CTCF JASPAR yes 70936021
chr3 10266780 10266796 SRF JASPAR yes 365797
chr3 10266780 10266796 SRF JASPAR yes 70936022
chr3 10266780 10266798 SRF JASPAR yes 365798
chr3 10266780 10266798 SRF JASPAR yes 70936023
chr3 10266791 10266795 ESR1 TRANSFAC yes 365799
chr3 10266791 10266795 ESR1 TRANSFAC yes 70936024
chr3 10266809 10266818 PITX3 JASPAR yes 365800
chr3 10266809 10266818 PITX3 JASPAR yes 70936025
chr3 10266810 10266818 OTX1 JASPAR yes 365801
chr3 10266810 10266818 OTX2 JASPAR yes 365802
chr3 10266810 10266818 OTX1 JASPAR yes 70936026
chr3 10266810 10266818 OTX2 JASPAR yes 70936027
chr3 10266830 10266851 ZNF263 JASPAR yes 365803
chr3 10266830 10266851 ZNF263 JASPAR yes 70936028
chr3 10266831 10266852 ZNF263 JASPAR yes 365804
chr3 10266831 10266852 ZNF263 JASPAR yes 70936029
chr3 10266835 10266840 GATA2 JASPAR yes 365805
chr3 10266835 10266840 GATA2 JASPAR yes 70936030
chr3 10266841 10266846 ETS2 TRANSFAC yes 365806
chr3 10266841 10266846 ETS2 TRANSFAC yes 70936031
chr3 10266843 10266851 EHF JASPAR yes 365807
chr3 10266843 10266851 EHF JASPAR yes 70936032
chr3 10266843 10266858 TFAP2C JASPAR yes 365808
chr3 10266843 10266858 TFAP2C JASPAR yes 70936033
SNP sites on vista39922[chr3:10266595-10266861]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10266602 rs181932713 T C
CTCF EP300 FOXA1 FOXA2 HNF4A HNF4G NFIC SOX8
6542302
chr3 10266827 rs142522559 TA T
CTCF EP300 FOXA1 NFIC RAD21 SMC3
6542303
chr3 10266827 rs760554071 TA T
CTCF EP300 FOXA1 NFIC RAD21 SMC3
6542304
chr3 10266845 rs372341957 C T
CTCF EHF EP300 ETS2 FOXA1 NFIC RAD21 SMC3 TFAP2C ZNF263
6542305
Genes possibly regulated by vista39922[chr3:10266595-10266861]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10182692 10193904 + VHL ENSG00000134086.7 10182692 0.76 0.99 3401 16097
chr3 10206549 10285427 + IRAK2 ENSG00000134070.4 10206549 0.82 0.99 3402 39954
chr3 10289707 10322902 + TATDN2 ENSG00000157014.6 10289707 0.67 0.97 3403 77154
chr3 10291056 10327480 + RP11-438J1.1 ENSG00000272410.1 10291056 0.88 0.81 3404 75805
chr3 10327359 10334631 - GHRL ENSG00000157017.11 10334631 0.98 0.99 3405 32230
chr3 10334815 10362862 - SEC13 ENSG00000157020.13 10362862 0.62 0.99 3406 3999
Expression level of Genes
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miRNAs possibly regulated by vista39922[chr3:10266595-10266861]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results