EnhancerDB
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  3. vista39929[chr3:10408339-10408724]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39929[chr3:10408339-10408724]
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Tissue distribution of vista39929
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Transcription factor that possibly regulate vista39929[chr3:10408339-10408724]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10408351 10408355 LFA1 TRANSFAC yes 369535
chr3 10408351 10408355 LFA1 TRANSFAC yes 70936215
chr3 10408367 10408375 FOXO3 JASPAR yes 369536
chr3 10408367 10408375 FOXO3 JASPAR yes 70936216
chr3 10408376 10408381 ETS2 TRANSFAC yes 369537
chr3 10408376 10408381 ETS2 TRANSFAC yes 70936217
chr3 10408387 10408406 CTCF JASPAR yes 369538
chr3 10408387 10408406 CTCF JASPAR yes 70936218
chr3 10408389 10408400 EBF1 JASPAR yes 369539
chr3 10408389 10408400 EBF1 JASPAR yes 70936219
chr3 10408413 10408417 YY1 TRANSFAC yes 369540
chr3 10408413 10408417 YY1 TRANSFAC yes 70936220
chr3 10408413 10408423 NFATC3 JASPAR yes 369541
chr3 10408413 10408423 NFATC3 JASPAR yes 70936221
chr3 10408428 10408440 NHLH1 JASPAR yes 369542
chr3 10408428 10408440 NHLH1 JASPAR yes 70936222
chr3 10408429 10408439 NHLH1 JASPAR yes 369543
chr3 10408429 10408439 TFAP4 JASPAR yes 369544
chr3 10408429 10408439 NHLH1 JASPAR yes 70936223
chr3 10408429 10408439 TFAP4 JASPAR yes 70936224
chr3 10408430 10408443 SCRT2 JASPAR yes 369545
chr3 10408430 10408443 SCRT2 JASPAR yes 70936225
chr3 10408483 10408488 ATF1 TRANSFAC yes 369546
chr3 10408483 10408488 ATF1 TRANSFAC yes 70936226
chr3 10408489 10408495 SOX10 JASPAR yes 369547
chr3 10408489 10408495 SOX10 JASPAR yes 70936227
chr3 10408500 10408512 GLI2 JASPAR yes 369548
chr3 10408500 10408512 GLI2 JASPAR yes 70936228
chr3 10408500 10408515 RUNX2 JASPAR yes 369549
chr3 10408500 10408515 RUNX2 JASPAR yes 70936229
chr3 10408501 10408510 RUNX2 JASPAR yes 369550
chr3 10408501 10408510 RUNX2 JASPAR yes 70936230
chr3 10408501 10408511 RUNX3 JASPAR yes 369551
chr3 10408501 10408511 RUNX3 JASPAR yes 70936231
chr3 10408506 10408512 SOX10 JASPAR yes 369552
chr3 10408506 10408512 SOX10 JASPAR yes 70936232
chr3 10408545 10408550 ETS2 TRANSFAC yes 369553
chr3 10408545 10408550 ETS2 TRANSFAC yes 70936233
chr3 10408563 10408577 JUN JASPAR yes 369554
chr3 10408563 10408577 JUN JASPAR yes 70936234
chr3 10408566 10408577 FOSL2 JASPAR yes 369555
chr3 10408566 10408577 JUNB JASPAR yes 369556
chr3 10408566 10408577 FOSL2 JASPAR yes 70936235
chr3 10408566 10408577 JUNB JASPAR yes 70936236
chr3 10408567 10408578 FOS JASPAR yes 369557
chr3 10408567 10408578 FOSL1 JASPAR yes 369558
chr3 10408567 10408578 JUND JASPAR yes 369559
chr3 10408567 10408578 FOS JASPAR yes 70936237
chr3 10408567 10408578 FOSL1 JASPAR yes 70936238
chr3 10408567 10408578 JUND JASPAR yes 70936239
chr3 10408592 10408596 LFA1 TRANSFAC yes 369560
chr3 10408592 10408596 LFA1 TRANSFAC yes 70936240
chr3 10408618 10408639 IRF1 JASPAR yes 369561
chr3 10408618 10408639 IRF1 JASPAR yes 70936241
chr3 10408621 10408642 ZNF263 JASPAR yes 369562
chr3 10408621 10408642 ZNF263 JASPAR yes 70936242
chr3 10408622 10408636 STAT1 JASPAR yes 369563
chr3 10408622 10408636 STAT1 JASPAR yes 70936243
chr3 10408622 10408637 STAT2 JASPAR yes 369564
chr3 10408622 10408637 STAT2 JASPAR yes 70936244
chr3 10408624 10408645 IRF1 JASPAR yes 369565
chr3 10408624 10408645 IRF1 JASPAR yes 70936245
chr3 10408625 10408635 NFATC3 JASPAR yes 369566
chr3 10408625 10408635 NFATC3 JASPAR yes 70936246
chr3 10408647 10408662 STAT1 JASPAR yes 369567
chr3 10408647 10408662 STAT1 JASPAR yes 70936247
chr3 10408649 10408660 STAT1 JASPAR yes 369568
chr3 10408649 10408660 STAT3 JASPAR yes 369569
chr3 10408649 10408660 STAT1 JASPAR yes 70936248
chr3 10408649 10408660 STAT3 JASPAR yes 70936249
chr3 10408657 10408678 ZNF263 JASPAR yes 369570
chr3 10408657 10408678 ZNF263 JASPAR yes 70936250
chr3 10408665 10408669 LFA1 TRANSFAC yes 369571
chr3 10408665 10408669 LFA1 TRANSFAC yes 70936251
chr3 10408673 10408678 SP1 TRANSFAC yes 369572
chr3 10408673 10408678 SP1 TRANSFAC yes 70936252
chr3 10408683 10408694 EBF1 JASPAR yes 369573
chr3 10408683 10408694 EBF1 JASPAR yes 70936253
chr3 10408716 10408737 ZNF263 JASPAR yes 369574
chr3 10408716 10408737 ZNF263 JASPAR yes 70936254
chr3 10408718 10408738 RREB1 JASPAR yes 369575
chr3 10408718 10408738 RREB1 JASPAR yes 70936255
chr3 10408719 10408729 SREBF1 JASPAR yes 369576
chr3 10408719 10408729 SREBF1 JASPAR yes 70936256
chr3 10408719 10408740 ZNF263 JASPAR yes 369577
chr3 10408719 10408740 ZNF263 JASPAR yes 70936257
chr3 10408720 10408728 MGA JASPAR yes 369578
chr3 10408720 10408728 MGA JASPAR yes 70936258
chr3 10408722 10408742 RREB1 JASPAR yes 369579
chr3 10408722 10408742 RREB1 JASPAR yes 70936259
SNP sites on vista39929[chr3:10408339-10408724]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10408349 rs3774172 C T no 6542758
chr3 10408446 rs543739808 A G no 6542759
chr3 10408636 rs114026294 A T
IRF1 STAT1 STAT2 ZNF263
6542760
chr3 10408641 rs576548504 G A
IRF1 ZNF263
6542761
chr3 10408697 rs188332768 C T no 6542762
Genes possibly regulated by vista39929[chr3:10408339-10408724]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10327359 10334631 - GHRL ENSG00000157017.11 10334631 0.98 0.99 3405 26292
chr3 10334815 10362862 - SEC13 ENSG00000157020.13 10362862 0.62 0.99 3406 54523
Expression level of Genes
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miRNAs possibly regulated by vista39929[chr3:10408339-10408724]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results