EnhancerDB
  1. Home
  2. Enhancers
  3. vista39931[chr3:10479008-10479279]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39931[chr3:10479008-10479279]
Back to top
Tissue distribution of vista39931
Back to top
Transcription factor that possibly regulate vista39931[chr3:10479008-10479279]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10479039 10479328 RUNX3 UCSC Txn Factor no Conserved 108528188
chr3 10479096 10479285 EBF1 UCSC Txn Factor no Conserved 108528189
chr3 10479012 10479024 FOXC2 JASPAR yes 372619
chr3 10479012 10479024 FOXC2 JASPAR yes 70936272
chr3 10479013 10479024 BATF JASPAR yes 372620
chr3 10479013 10479024 BATF JASPAR yes 70936273
chr3 10479014 10479025 FOSL2 JASPAR yes 372621
chr3 10479014 10479025 FOXA1 JASPAR yes 372622
chr3 10479014 10479025 FOSL2 JASPAR yes 70936274
chr3 10479014 10479025 FOXA1 JASPAR yes 70936275
chr3 10479015 10479026 FOSL1 JASPAR yes 372623
chr3 10479015 10479026 FOSL1 JASPAR yes 70936276
chr3 10479025 10479035 SREBF1 JASPAR yes 372624
chr3 10479025 10479035 SREBF2 JASPAR yes 372625
chr3 10479025 10479035 SREBF1 JASPAR yes 70936277
chr3 10479025 10479035 SREBF2 JASPAR yes 70936278
chr3 10479032 10479036 YY1 TRANSFAC yes 372626
chr3 10479032 10479036 YY1 TRANSFAC yes 70936279
chr3 10479032 10479043 HOXA10 JASPAR yes 372627
chr3 10479032 10479043 HOXA10 JASPAR yes 70936280
chr3 10479033 10479042 CDX1 JASPAR yes 372628
chr3 10479033 10479042 CDX1 JASPAR yes 70936281
chr3 10479033 10479044 CDX2 JASPAR yes 372629
chr3 10479033 10479044 CDX2 JASPAR yes 70936282
chr3 10479066 10479071 H4TF1 TRANSFAC yes 372630
chr3 10479066 10479071 H4TF1 TRANSFAC yes 70936283
chr3 10479076 10479091 FOXP1 JASPAR yes 372631
chr3 10479076 10479091 FOXP1 JASPAR yes 70936284
chr3 10479077 10479088 FOXA1 JASPAR yes 372632
chr3 10479077 10479088 FOXA1 JASPAR yes 70936285
chr3 10479077 10479092 FOXA1 JASPAR yes 372633
chr3 10479077 10479092 FOXA1 JASPAR yes 70936286
chr3 10479078 10479084 JUN TRANSFAC yes 372634
chr3 10479078 10479084 JUN TRANSFAC yes 70936287
chr3 10479078 10479089 FOXB1 JASPAR yes 372635
chr3 10479078 10479089 FOXC1 JASPAR yes 372636
chr3 10479078 10479089 FOXB1 JASPAR yes 70936288
chr3 10479078 10479089 FOXC1 JASPAR yes 70936289
chr3 10479078 10479090 FOXC2 JASPAR yes 372637
chr3 10479078 10479090 FOXC2 JASPAR yes 70936290
chr3 10479079 10479090 FOXP2 JASPAR yes 372638
chr3 10479079 10479090 FOXP2 JASPAR yes 70936291
chr3 10479081 10479088 FOXD2 JASPAR yes 372639
chr3 10479081 10479088 FOXI1 JASPAR yes 372640
chr3 10479081 10479088 FOXL1 JASPAR yes 372641
chr3 10479081 10479088 FOXO4 JASPAR yes 372642
chr3 10479081 10479088 FOXO6 JASPAR yes 372643
chr3 10479081 10479088 FOXP3 JASPAR yes 372644
chr3 10479081 10479088 FOXD2 JASPAR yes 70936292
chr3 10479081 10479088 FOXI1 JASPAR yes 70936293
chr3 10479081 10479088 FOXL1 JASPAR yes 70936294
chr3 10479081 10479088 FOXO4 JASPAR yes 70936295
chr3 10479081 10479088 FOXO6 JASPAR yes 70936296
chr3 10479081 10479088 FOXP3 JASPAR yes 70936297
chr3 10479081 10479089 FOXD1 JASPAR yes 372645
chr3 10479081 10479089 FOXO3 JASPAR yes 372646
chr3 10479081 10479089 FOXD1 JASPAR yes 70936298
chr3 10479081 10479089 FOXO3 JASPAR yes 70936299
chr3 10479095 10479110 JUND JASPAR yes 372647
chr3 10479095 10479110 JUND JASPAR yes 70936300
chr3 10479096 10479109 JUN JASPAR yes 372648
chr3 10479096 10479109 JUN JASPAR yes 70936301
chr3 10479097 10479111 ATF7 JASPAR yes 372649
chr3 10479097 10479111 BATF3 JASPAR yes 372650
chr3 10479097 10479111 ATF7 JASPAR yes 70936302
chr3 10479097 10479111 BATF3 JASPAR yes 70936303
chr3 10479098 10479110 JDP2 JASPAR yes 372651
chr3 10479098 10479110 JDP2 JASPAR yes 70936304
chr3 10479098 10479113 JUND JASPAR yes 372652
chr3 10479098 10479113 JUND JASPAR yes 70936305
chr3 10479106 10479110 YY1 TRANSFAC yes 372653
chr3 10479106 10479110 YY1 TRANSFAC yes 70936306
chr3 10479107 10479115 FEV JASPAR yes 372654
chr3 10479107 10479115 FEV JASPAR yes 70936307
chr3 10479108 10479123 MAFK JASPAR yes 372655
chr3 10479108 10479123 MAFK JASPAR yes 70936308
chr3 10479157 10479164 PEA3 TRANSFAC yes 372656
chr3 10479157 10479164 PEA3 TRANSFAC yes 70936309
chr3 10479161 10479174 SMAD2 JASPAR yes 372657
chr3 10479161 10479174 SMAD2 JASPAR yes 70936310
chr3 10479173 10479176 MYB TRANSFAC yes 372658
chr3 10479173 10479176 MYB TRANSFAC yes 70936311
chr3 10479180 10479195 RUNX2 JASPAR yes 372659
chr3 10479180 10479195 RUNX2 JASPAR yes 70936312
chr3 10479194 10479201 SPI1 JASPAR yes 372660
chr3 10479194 10479201 SPI1 JASPAR yes 70936313
chr3 10479200 10479203 MYB TRANSFAC yes 372661
chr3 10479200 10479203 MYB TRANSFAC yes 70936314
chr3 10479202 10479207 SP1 TRANSFAC yes 372662
chr3 10479202 10479207 SP1 TRANSFAC yes 70936315
chr3 10479214 10479217 MYB TRANSFAC yes 372663
chr3 10479214 10479217 MYB TRANSFAC yes 70936316
chr3 10479214 10479229 ZIC4 JASPAR yes 372664
chr3 10479214 10479229 ZIC4 JASPAR yes 70936317
chr3 10479216 10479221 SP1 TRANSFAC yes 372665
chr3 10479216 10479221 SP1 TRANSFAC yes 70936318
chr3 10479238 10479251 SMAD2 JASPAR yes 372666
chr3 10479238 10479251 SMAD2 JASPAR yes 70936319
chr3 10479247 10479260 ZBTB18 JASPAR yes 372667
chr3 10479247 10479260 ZBTB18 JASPAR yes 70936320
chr3 10479273 10479283 POU6F2 JASPAR yes 372668
chr3 10479273 10479283 POU6F2 JASPAR yes 70936321
chr3 10479277 10479281 YY1 TRANSFAC yes 372669
chr3 10479277 10479281 YY1 TRANSFAC yes 70936322
SNP sites on vista39931[chr3:10479008-10479279]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10479107 rs78557421 C T
ATF7 BATF3 EBF1 FEV JDP2 JUN JUND RUNX3 YY1
6543169
chr3 10479218 rs114857326 C T
EBF1 RUNX3 SP1 ZIC4
6543170
chr3 10479233 rs572641243 G A
EBF1 RUNX3
6543171
chr3 10479259 rs34859 C T
EBF1 RUNX3 ZBTB18
6543172
Genes possibly regulated by vista39931[chr3:10479008-10479279]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista39931[chr3:10479008-10479279]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 10436183 10436204 - hsa-miR-885-3p MIMAT0004948 10547267 7.339503409199334e-06 0.944954 0.81487 1144
Expression level of miRNAs
Back to top