EnhancerDB
  1. Home
  2. Enhancers
  3. vista39940[chr3:10744704-10745135]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39940[chr3:10744704-10745135]
Back to top
Tissue distribution of vista39940
Back to top
Transcription factor that possibly regulate vista39940[chr3:10744704-10745135]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10744708 10744717 HIC2 JASPAR yes 70936573
chr3 10744738 10744743 ETS2 TRANSFAC yes 70936574
chr3 10744746 10744751 SP1 TRANSFAC yes 70936575
chr3 10744750 10744754 ESR1 TRANSFAC yes 70936576
chr3 10744760 10744780 TP53 JASPAR yes 70936577
chr3 10744773 10744779 MZF1 JASPAR yes 70936578
chr3 10744793 10744799 TCF1 TRANSFAC yes 70936579
chr3 10744806 10744817 EBF1 JASPAR yes 70936580
chr3 10744844 10744851 SP1 TRANSFAC yes 70936581
chr3 10744845 10744852 SP1 TRANSFAC yes 70936582
chr3 10744846 10744851 SP1 TRANSFAC yes 70936583
chr3 10744846 10744852 SP1 TRANSFAC yes 70936584
chr3 10744847 10744868 ZNF263 JASPAR yes 70936585
chr3 10744867 10744878 EBF1 JASPAR yes 70936586
chr3 10744872 10744882 SP1 JASPAR yes 70936587
chr3 10744873 10744883 SP1 JASPAR yes 70936588
chr3 10744874 10744879 SP1 TRANSFAC yes 70936589
chr3 10744875 10744880 SP1 TRANSFAC yes 70936590
chr3 10744875 10744881 SP1 TRANSFAC yes 70936591
chr3 10744884 10744902 NFYA JASPAR yes 70936592
chr3 10744887 10744893 MYC TRANSFAC yes 70936593
chr3 10744887 10744903 NFYA JASPAR yes 70936594
chr3 10744890 10744905 NFYB JASPAR yes 70936595
chr3 10744896 10744900 ESR1 TRANSFAC yes 70936596
chr3 10744905 10744910 ETS2 TRANSFAC yes 70936597
chr3 10744930 10744951 ZNF263 JASPAR yes 70936598
chr3 10744936 10744951 NR2C2 JASPAR yes 70936599
chr3 10744937 10744952 PRDM1 JASPAR yes 70936600
chr3 10744945 10744956 EBF1 JASPAR yes 70936601
chr3 10744952 10744958 MAZ TRANSFAC yes 70936602
chr3 10744952 10744963 E2F6 JASPAR yes 70936603
chr3 10744979 10744996 RXRA JASPAR yes 70936604
chr3 10744989 10745004 HNF4A JASPAR yes 70936605
chr3 10744990 10745005 HNF4G JASPAR yes 70936606
chr3 10744990 10745005 NR2C2 JASPAR yes 70936607
chr3 10745019 10745023 LFA1 TRANSFAC yes 70936608
chr3 10745026 10745047 ZNF263 JASPAR yes 70936609
chr3 10745040 10745045 ETS2 TRANSFAC yes 70936610
chr3 10745040 10745057 BCL6B JASPAR yes 70936611
chr3 10745063 10745080 RARA JASPAR yes 70936612
chr3 10745064 10745075 YY2 JASPAR yes 70936613
chr3 10745070 10745074 YY1 TRANSFAC yes 70936614
chr3 10745070 10745083 NR2F1 JASPAR yes 70936615
chr3 10745074 10745089 NR2C2 JASPAR yes 70936616
chr3 10745109 10745115 TCF4 TRANSFAC yes 70936617
SNP sites on vista39940[chr3:10744704-10745135]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10744790 rs531505103 A G no 6544382
chr3 10744807 rs549979948 C A
EBF1
6544383
chr3 10744825 rs116551647 A G,T no 6544384
chr3 10744833 rs111618952 A T no 6544385
chr3 10744878 rs138530016 C T
EBF1 SP1
6544386
chr3 10744904 rs2596851 A T
NFYB
6544387
chr3 10745080 rs546099791 C G
NR2C2 NR2F1 RARA
6544388
chr3 10745118 rs138022631 C CTAT no 6544389
Genes possibly regulated by vista39940[chr3:10744704-10745135]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10365707 10749716 - ATP2B2 ENSG00000157087.12 10749716 0.99 0.99 3407 95419
Expression level of Genes
Back to top
miRNAs possibly regulated by vista39940[chr3:10744704-10745135]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results