EnhancerDB
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  3. vista39943[chr3:11187629-11187920]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39943[chr3:11187629-11187920]
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Tissue distribution of vista39943
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Transcription factor that possibly regulate vista39943[chr3:11187629-11187920]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 11187592 11187961 EP300 UCSC Txn Factor no Conserved 108528197
chr3 11187615 11187632 ZNF410 JASPAR yes 398695
chr3 11187615 11187632 ZNF410 JASPAR yes 70936655
chr3 11187657 11187661 YY1 TRANSFAC yes 398697
chr3 11187657 11187661 YY1 TRANSFAC yes 70936656
chr3 11187665 11187679 STAT1 JASPAR yes 398698
chr3 11187665 11187679 STAT1 JASPAR yes 70936657
chr3 11187666 11187674 FOXO3 JASPAR yes 398699
chr3 11187666 11187674 FOXO3 JASPAR yes 70936658
chr3 11187715 11187730 RUNX2 JASPAR yes 398700
chr3 11187715 11187730 RUNX2 JASPAR yes 70936659
chr3 11187729 11187741 FOXC2 JASPAR yes 398701
chr3 11187729 11187741 FOXC2 JASPAR yes 70936660
chr3 11187729 11187742 POU2F2 JASPAR yes 398702
chr3 11187729 11187742 POU2F2 JASPAR yes 70936661
chr3 11187730 11187741 FOXB1 JASPAR yes 398703
chr3 11187730 11187741 FOXC1 JASPAR yes 398704
chr3 11187730 11187741 FOXB1 JASPAR yes 70936662
chr3 11187730 11187741 FOXC1 JASPAR yes 70936663
chr3 11187731 11187735 YY1 TRANSFAC yes 398705
chr3 11187731 11187735 YY1 TRANSFAC yes 70936664
chr3 11187748 11187762 JUN JASPAR yes 398706
chr3 11187748 11187762 JUN JASPAR yes 70936665
chr3 11187751 11187762 FOSL2 JASPAR yes 398707
chr3 11187751 11187762 JUNB JASPAR yes 398708
chr3 11187751 11187762 FOSL2 JASPAR yes 70936666
chr3 11187751 11187762 JUNB JASPAR yes 70936667
chr3 11187752 11187763 FOS JASPAR yes 398709
chr3 11187752 11187763 FOSL1 JASPAR yes 398710
chr3 11187752 11187763 JUND JASPAR yes 398711
chr3 11187752 11187763 FOS JASPAR yes 70936668
chr3 11187752 11187763 FOSL1 JASPAR yes 70936669
chr3 11187752 11187763 JUND JASPAR yes 70936670
chr3 11187753 11187760 JUN TRANSFAC yes 398712
chr3 11187753 11187760 JUN TRANSFAC yes 70936671
chr3 11187763 11187773 TEAD4 JASPAR yes 398713
chr3 11187763 11187773 TEAD4 JASPAR yes 70936672
chr3 11187789 11187802 POU3F3 JASPAR yes 398714
chr3 11187789 11187802 POU3F3 JASPAR yes 70936673
chr3 11187789 11187803 POU1F1 JASPAR yes 398715
chr3 11187789 11187803 POU1F1 JASPAR yes 70936674
chr3 11187790 11187802 FOXI1 JASPAR yes 398716
chr3 11187790 11187802 POU3F1 JASPAR yes 398717
chr3 11187790 11187802 POU3F2 JASPAR yes 398718
chr3 11187790 11187802 FOXI1 JASPAR yes 70936675
chr3 11187790 11187802 POU3F1 JASPAR yes 70936676
chr3 11187790 11187802 POU3F2 JASPAR yes 70936677
chr3 11187791 11187799 FOXL1 JASPAR yes 398719
chr3 11187791 11187799 FOXL1 JASPAR yes 70936678
chr3 11187791 11187803 FOXC2 JASPAR yes 398720
chr3 11187791 11187803 FOXC2 JASPAR yes 70936679
chr3 11187791 11187805 FOXF2 JASPAR yes 398721
chr3 11187791 11187805 FOXF2 JASPAR yes 70936680
chr3 11187792 11187800 FOXG1 JASPAR yes 398722
chr3 11187792 11187800 FOXG1 JASPAR yes 70936681
chr3 11187792 11187803 FOXC1 JASPAR yes 398723
chr3 11187792 11187803 FOXC1 JASPAR yes 70936682
chr3 11187793 11187804 FOXH1 JASPAR yes 398724
chr3 11187793 11187804 FOXH1 JASPAR yes 70936683
chr3 11187801 11187816 RFX5 JASPAR yes 398725
chr3 11187801 11187816 RFX5 JASPAR yes 70936684
chr3 11187804 11187813 NFIX JASPAR yes 398726
chr3 11187804 11187813 NFIX JASPAR yes 70936685
chr3 11187806 11187812 NFIC JASPAR yes 398727
chr3 11187806 11187812 NFIC JASPAR yes 70936686
chr3 11187809 11187821 PROX1 JASPAR yes 398728
chr3 11187809 11187821 PROX1 JASPAR yes 70936687
chr3 11187816 11187823 NFATC2 JASPAR yes 398729
chr3 11187816 11187823 NFATC2 JASPAR yes 70936688
chr3 11187824 11187838 IRF8 JASPAR yes 398730
chr3 11187824 11187838 IRF8 JASPAR yes 70936689
chr3 11187834 11187847 POU2F2 JASPAR yes 398731
chr3 11187834 11187847 POU2F2 JASPAR yes 70936690
chr3 11187835 11187839 YY1 TRANSFAC yes 398732
chr3 11187835 11187839 YY1 TRANSFAC yes 70936691
chr3 11187853 11187867 PAX6 JASPAR yes 398733
chr3 11187853 11187867 PAX6 JASPAR yes 70936692
chr3 11187876 11187887 FLI1 JASPAR yes 398734
chr3 11187876 11187887 FLI1 JASPAR yes 70936693
chr3 11187877 11187887 ERF JASPAR yes 398735
chr3 11187877 11187887 ERG JASPAR yes 398736
chr3 11187877 11187887 ETS1 JASPAR yes 398737
chr3 11187877 11187887 ERF JASPAR yes 70936694
chr3 11187877 11187887 ERG JASPAR yes 70936695
chr3 11187877 11187887 ETS1 JASPAR yes 70936696
chr3 11187883 11187887 NFE TRANSFAC yes 398738
chr3 11187883 11187887 NFE TRANSFAC yes 70936697
chr3 11187911 11187925 TCF7L2 JASPAR yes 398739
chr3 11187911 11187925 TCF7L2 JASPAR yes 70936698
chr3 11187915 11187929 POU4F1 JASPAR yes 398740
chr3 11187915 11187929 POU4F1 JASPAR yes 70936699
chr3 11187915 11187931 POU4F3 JASPAR yes 398741
chr3 11187915 11187931 POU4F3 JASPAR yes 70936700
chr3 11187920 11187924 YY1 TRANSFAC yes 398742
chr3 11187920 11187924 YY1 TRANSFAC yes 70936701
SNP sites on vista39943[chr3:11187629-11187920]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 11187795 rs77785750 G C
EP300 FOXC1 FOXC2 FOXF2 FOXG1 FOXH1 FOXI1 FOXL1 POU1F1 POU3F1 POU3F2 POU3F3
6546096
chr3 11187838 rs188151274 T A,C
EP300 IRF8 POU2F2 YY1
6546097
chr3 11187883 rs147426575 C T
EP300 ERF ERG ETS1 FLI1 NFE
6546098
Genes possibly regulated by vista39943[chr3:11187629-11187920]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 11178779 11305243 + HRH1 ENSG00000196639.6 11178779 0.75 1.0 3410 91150
Expression level of Genes
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miRNAs possibly regulated by vista39943[chr3:11187629-11187920]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results