EnhancerDB
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  3. vista39944[chr3:11197111-11197379]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39944[chr3:11197111-11197379]
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Tissue distribution of vista39944
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Transcription factor that possibly regulate vista39944[chr3:11197111-11197379]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 11197093 11197469 CTCF UCSC Txn Factor no Conserved 108528198
chr3 11197147 11197432 SMC3 UCSC Txn Factor no Conserved 108528199
chr3 11197152 11197433 RAD21 UCSC Txn Factor no Conserved 108528200
chr3 11197123 11197128 ETS2 TRANSFAC yes 399256
chr3 11197123 11197128 ETS2 TRANSFAC yes 70936702
chr3 11197123 11197131 FEV JASPAR yes 399257
chr3 11197123 11197131 FEV JASPAR yes 70936703
chr3 11197124 11197131 SPI1 JASPAR yes 399258
chr3 11197124 11197131 SPI1 JASPAR yes 70936704
chr3 11197149 11197159 SP1 JASPAR yes 399259
chr3 11197149 11197159 SP1 JASPAR yes 70936705
chr3 11197150 11197160 SP1 JASPAR yes 399260
chr3 11197150 11197160 SP1 JASPAR yes 70936706
chr3 11197153 11197165 INSM1 JASPAR yes 399261
chr3 11197153 11197165 INSM1 JASPAR yes 70936707
chr3 11197153 11197167 PLAG1 JASPAR yes 399262
chr3 11197153 11197167 PLAG1 JASPAR yes 70936708
chr3 11197154 11197175 ZNF263 JASPAR yes 399263
chr3 11197154 11197175 ZNF263 JASPAR yes 70936709
chr3 11197157 11197165 SP1 TRANSFAC yes 399264
chr3 11197157 11197165 SP1 TRANSFAC yes 70936710
chr3 11197157 11197167 SP1 JASPAR yes 399265
chr3 11197157 11197167 SP1 JASPAR yes 70936711
chr3 11197182 11197190 TBX15 JASPAR yes 399266
chr3 11197182 11197190 TBX15 JASPAR yes 70936712
chr3 11197184 11197199 NR2C2 JASPAR yes 399267
chr3 11197184 11197199 NR2C2 JASPAR yes 70936713
chr3 11197184 11197205 ZNF263 JASPAR yes 399268
chr3 11197184 11197205 ZNF263 JASPAR yes 70936714
chr3 11197187 11197208 ZNF263 JASPAR yes 399269
chr3 11197187 11197208 ZNF263 JASPAR yes 70936715
chr3 11197189 11197200 E2F6 JASPAR yes 399270
chr3 11197189 11197200 E2F6 JASPAR yes 70936716
chr3 11197228 11197241 SMAD2 JASPAR yes 399271
chr3 11197228 11197241 SMAD2 JASPAR yes 70936717
chr3 11197234 11197244 TFAP4 JASPAR yes 399272
chr3 11197234 11197244 TFAP4 JASPAR yes 70936718
chr3 11197255 11197266 STAT3 JASPAR yes 399273
chr3 11197255 11197266 STAT3 JASPAR yes 70936719
chr3 11197271 11197275 NFE TRANSFAC yes 399274
chr3 11197271 11197275 NFE TRANSFAC yes 70936720
chr3 11197275 11197294 CTCF JASPAR yes 399275
chr3 11197275 11197294 CTCF JASPAR yes 70936721
chr3 11197287 11197298 E2F4 JASPAR yes 399276
chr3 11197287 11197298 E2F6 JASPAR yes 399277
chr3 11197287 11197298 E2F4 JASPAR yes 70936722
chr3 11197287 11197298 E2F6 JASPAR yes 70936723
chr3 11197288 11197299 E2F1 JASPAR yes 399278
chr3 11197288 11197299 E2F1 JASPAR yes 70936724
chr3 11197309 11197329 TP63 JASPAR yes 399279
chr3 11197309 11197329 TP63 JASPAR yes 70936725
chr3 11197310 11197328 TP53 JASPAR yes 399280
chr3 11197310 11197328 TP63 JASPAR yes 399281
chr3 11197310 11197328 TP73 JASPAR yes 399282
chr3 11197310 11197328 TP53 JASPAR yes 70936726
chr3 11197310 11197328 TP63 JASPAR yes 70936727
chr3 11197310 11197328 TP73 JASPAR yes 70936728
chr3 11197311 11197326 TP53 JASPAR yes 399283
chr3 11197311 11197326 TP53 JASPAR yes 70936729
chr3 11197358 11197373 HSF1 JASPAR yes 399284
chr3 11197358 11197373 HSF1 JASPAR yes 70936730
chr3 11197372 11197375 MYB TRANSFAC yes 399285
chr3 11197372 11197375 MYB TRANSFAC yes 70936731
SNP sites on vista39944[chr3:11197111-11197379]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 11197243 rs113430006 A G
CTCF RAD21 SMC3 TFAP4
6546160
Genes possibly regulated by vista39944[chr3:11197111-11197379]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 11178779 11305243 + HRH1 ENSG00000196639.6 11178779 0.75 1.0 3410 81668
Expression level of Genes
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miRNAs possibly regulated by vista39944[chr3:11197111-11197379]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results