EnhancerDB
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  3. vista39945[chr3:11230556-11230841]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39945[chr3:11230556-11230841]
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Tissue distribution of vista39945
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Transcription factor that possibly regulate vista39945[chr3:11230556-11230841]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 11230598 11230607 NKX2-8 JASPAR yes 402521
chr3 11230598 11230607 NKX2-8 JASPAR yes 70936732
chr3 11230598 11230608 NKX2-3 JASPAR yes 402522
chr3 11230598 11230608 NKX2-3 JASPAR yes 70936733
chr3 11230626 11230630 YY1 TRANSFAC yes 402523
chr3 11230626 11230630 YY1 TRANSFAC yes 70936734
chr3 11230636 11230650 SPIC JASPAR yes 402524
chr3 11230636 11230650 SPIC JASPAR yes 70936735
chr3 11230637 11230645 FEV JASPAR yes 402525
chr3 11230637 11230645 FEV JASPAR yes 70936736
chr3 11230637 11230650 JUN JASPAR yes 402526
chr3 11230637 11230650 JUN JASPAR yes 70936737
chr3 11230638 11230659 ZNF263 JASPAR yes 402527
chr3 11230638 11230659 ZNF263 JASPAR yes 70936738
chr3 11230645 11230665 TP63 JASPAR yes 402528
chr3 11230645 11230665 TP63 JASPAR yes 70936739
chr3 11230652 11230657 ETS2 TRANSFAC yes 402529
chr3 11230652 11230657 ETS2 TRANSFAC yes 70936740
chr3 11230656 11230670 PAX6 JASPAR yes 402530
chr3 11230656 11230670 PAX6 JASPAR yes 70936741
chr3 11230657 11230670 POU2F2 JASPAR yes 402531
chr3 11230657 11230670 POU2F2 JASPAR yes 70936742
chr3 11230667 11230685 SRF JASPAR yes 402532
chr3 11230667 11230685 SRF JASPAR yes 70936743
chr3 11230668 11230678 NFIA JASPAR yes 402533
chr3 11230668 11230678 NFIA JASPAR yes 70936744
chr3 11230669 11230685 SRF JASPAR yes 402534
chr3 11230669 11230685 SRF JASPAR yes 70936745
chr3 11230669 11230687 SRF JASPAR yes 402535
chr3 11230669 11230687 SRF JASPAR yes 70936746
chr3 11230670 11230676 NFIC JASPAR yes 402536
chr3 11230670 11230676 NFIC JASPAR yes 70936747
chr3 11230695 11230698 MYB TRANSFAC yes 402537
chr3 11230695 11230698 MYB TRANSFAC yes 70936748
chr3 11230698 11230704 TCF4 TRANSFAC yes 402538
chr3 11230698 11230704 TCF4 TRANSFAC yes 70936749
chr3 11230729 11230736 NKX3-1 JASPAR yes 402539
chr3 11230729 11230736 NKX3-1 JASPAR yes 70936750
chr3 11230733 11230746 POU2F2 JASPAR yes 402540
chr3 11230733 11230746 POU2F2 JASPAR yes 70936751
chr3 11230734 11230746 POU3F1 JASPAR yes 402541
chr3 11230734 11230746 POU3F2 JASPAR yes 402542
chr3 11230734 11230746 POU3F1 JASPAR yes 70936752
chr3 11230734 11230746 POU3F2 JASPAR yes 70936753
chr3 11230734 11230747 POU3F3 JASPAR yes 402543
chr3 11230734 11230747 POU3F3 JASPAR yes 70936754
chr3 11230735 11230739 YY1 TRANSFAC yes 402544
chr3 11230735 11230739 YY1 TRANSFAC yes 70936755
chr3 11230735 11230747 POU2F1 JASPAR yes 402545
chr3 11230735 11230747 POU2F1 JASPAR yes 70936756
chr3 11230736 11230743 POU2F1 TRANSFAC yes 402546
chr3 11230736 11230743 POU2F2C TRANSFAC yes 402547
chr3 11230736 11230743 POU2F2 TRANSFAC yes 402548
chr3 11230736 11230743 POU2F1 TRANSFAC yes 70936757
chr3 11230736 11230743 POU2F2C TRANSFAC yes 70936758
chr3 11230736 11230743 POU2F2 TRANSFAC yes 70936759
chr3 11230736 11230745 POU5F1B JASPAR yes 402549
chr3 11230736 11230745 POU5F1B JASPAR yes 70936760
chr3 11230753 11230766 NR2F1 JASPAR yes 402550
chr3 11230753 11230766 NR2F1 JASPAR yes 70936761
chr3 11230756 11230764 NR4A2 JASPAR yes 402551
chr3 11230756 11230764 NR4A2 JASPAR yes 70936762
chr3 11230757 11230774 RARA JASPAR yes 402552
chr3 11230757 11230774 RARA JASPAR yes 70936763
chr3 11230759 11230774 STAT1 JASPAR yes 402553
chr3 11230759 11230774 STAT1 JASPAR yes 70936764
chr3 11230761 11230772 STAT1 JASPAR yes 402554
chr3 11230761 11230772 STAT3 JASPAR yes 402555
chr3 11230761 11230772 STAT1 JASPAR yes 70936765
chr3 11230761 11230772 STAT3 JASPAR yes 70936766
chr3 11230762 11230778 ZNF143 JASPAR yes 402556
chr3 11230762 11230778 ZNF143 JASPAR yes 70936767
chr3 11230763 11230777 PLAG1 JASPAR yes 402557
chr3 11230763 11230777 PLAG1 JASPAR yes 70936768
chr3 11230787 11230792 ETS2 TRANSFAC yes 402558
chr3 11230787 11230792 ETS2 TRANSFAC yes 70936769
chr3 11230794 11230808 E2F7 JASPAR yes 402559
chr3 11230794 11230808 E2F7 JASPAR yes 70936770
chr3 11230803 11230807 YY1 TRANSFAC yes 402560
chr3 11230803 11230807 YY1 TRANSFAC yes 70936771
chr3 11230841 11230852 NFE2L2 JASPAR yes 402561
chr3 11230841 11230852 NFE2L2 JASPAR yes 70936772
SNP sites on vista39945[chr3:11230556-11230841]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 11230672 rs530794650 G A
NFIA NFIC SRF
6546543
Genes possibly regulated by vista39945[chr3:11230556-11230841]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 11178779 11305243 + HRH1 ENSG00000196639.6 11178779 0.75 1.0 3410 48223
chr3 11313995 11599139 + ATG7 ENSG00000197548.8 11313995 0.66 1.0 3411 16846
Expression level of Genes
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miRNAs possibly regulated by vista39945[chr3:11230556-11230841]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results