EnhancerDB
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  3. vista39947[chr3:11261398-11261658]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39947[chr3:11261398-11261658]
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Tissue distribution of vista39947
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Transcription factor that possibly regulate vista39947[chr3:11261398-11261658]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 11261398 11261413 FOXP1 JASPAR yes 406418
chr3 11261398 11261413 FOXP1 JASPAR yes 70936797
chr3 11261399 11261414 FOXP1 JASPAR yes 406419
chr3 11261399 11261414 FOXP1 JASPAR yes 70936798
chr3 11261399 11261420 IRF1 JASPAR yes 406420
chr3 11261399 11261420 IRF1 JASPAR yes 70936799
chr3 11261400 11261415 FOXP1 JASPAR yes 406421
chr3 11261400 11261415 FOXP1 JASPAR yes 70936800
chr3 11261400 11261421 IRF1 JASPAR yes 406422
chr3 11261400 11261421 IRF1 JASPAR yes 70936801
chr3 11261401 11261416 FOXP1 JASPAR yes 406423
chr3 11261401 11261416 FOXP1 JASPAR yes 70936802
chr3 11261401 11261422 IRF1 JASPAR yes 406424
chr3 11261401 11261422 IRF1 JASPAR yes 70936803
chr3 11261402 11261417 FOXP1 JASPAR yes 406425
chr3 11261402 11261417 FOXP1 JASPAR yes 70936804
chr3 11261402 11261423 IRF1 JASPAR yes 406426
chr3 11261402 11261423 IRF1 JASPAR yes 70936805
chr3 11261403 11261418 FOXP1 JASPAR yes 406427
chr3 11261403 11261418 FOXP1 JASPAR yes 70936806
chr3 11261403 11261424 IRF1 JASPAR yes 406428
chr3 11261403 11261424 IRF1 JASPAR yes 70936807
chr3 11261404 11261419 FOXP1 JASPAR yes 406429
chr3 11261404 11261419 FOXP1 JASPAR yes 70936808
chr3 11261404 11261425 IRF1 JASPAR yes 406430
chr3 11261404 11261425 IRF1 JASPAR yes 70936809
chr3 11261405 11261420 FOXP1 JASPAR yes 406431
chr3 11261405 11261420 FOXP1 JASPAR yes 70936810
chr3 11261405 11261426 IRF1 JASPAR yes 406432
chr3 11261405 11261426 IRF1 JASPAR yes 70936811
chr3 11261406 11261421 FOXP1 JASPAR yes 406433
chr3 11261406 11261421 FOXP1 JASPAR yes 70936812
chr3 11261407 11261422 FOXP1 JASPAR yes 406434
chr3 11261407 11261422 FOXP1 JASPAR yes 70936813
chr3 11261409 11261430 IRF1 JASPAR yes 406435
chr3 11261409 11261430 IRF1 JASPAR yes 70936814
chr3 11261410 11261431 IRF1 JASPAR yes 406436
chr3 11261410 11261431 IRF1 JASPAR yes 70936815
chr3 11261413 11261427 SPIC JASPAR yes 406437
chr3 11261413 11261427 SPIC JASPAR yes 70936816
chr3 11261414 11261428 SPIC JASPAR yes 406438
chr3 11261414 11261428 STAT1 JASPAR yes 406439
chr3 11261414 11261428 SPIC JASPAR yes 70936817
chr3 11261414 11261428 STAT1 JASPAR yes 70936818
chr3 11261414 11261429 PRDM1 JASPAR yes 406440
chr3 11261414 11261429 STAT2 JASPAR yes 406441
chr3 11261414 11261429 PRDM1 JASPAR yes 70936819
chr3 11261414 11261429 STAT2 JASPAR yes 70936820
chr3 11261418 11261423 ETS2 TRANSFAC yes 406442
chr3 11261418 11261423 ETS2 TRANSFAC yes 70936821
chr3 11261427 11261438 PHOX2A JASPAR yes 406443
chr3 11261427 11261438 PROP1 JASPAR yes 406444
chr3 11261427 11261438 PHOX2A JASPAR yes 70936822
chr3 11261427 11261438 PROP1 JASPAR yes 70936823
chr3 11261434 11261449 HNF1A JASPAR yes 406445
chr3 11261434 11261449 HNF1A JASPAR yes 70936824
chr3 11261435 11261448 HNF1B JASPAR yes 406446
chr3 11261435 11261448 HNF1B JASPAR yes 70936825
chr3 11261436 11261448 HNF1B JASPAR yes 406447
chr3 11261436 11261448 HNF1B JASPAR yes 70936826
chr3 11261437 11261449 HLF JASPAR yes 406448
chr3 11261437 11261449 HLF JASPAR yes 70936827
chr3 11261444 11261447 MYB TRANSFAC yes 406449
chr3 11261444 11261447 MYB TRANSFAC yes 70936828
chr3 11261446 11261459 DUXA JASPAR yes 406450
chr3 11261446 11261459 DUXA JASPAR yes 70936829
chr3 11261447 11261458 DUX4 JASPAR yes 406451
chr3 11261447 11261458 DUX4 JASPAR yes 70936830
chr3 11261466 11261471 GATA1 TRANSFAC yes 406452
chr3 11261466 11261471 GATA1 TRANSFAC yes 70936831
chr3 11261501 11261518 BCL6B JASPAR yes 406453
chr3 11261501 11261518 BCL6B JASPAR yes 70936832
chr3 11261508 11261515 ETS1 TRANSFAC yes 406454
chr3 11261508 11261515 ETS1 TRANSFAC yes 70936833
chr3 11261508 11261526 NR3C1 JASPAR yes 406455
chr3 11261508 11261526 NR3C1 JASPAR yes 70936834
chr3 11261510 11261528 NR3C1 JASPAR yes 406456
chr3 11261510 11261528 NR3C1 JASPAR yes 70936835
chr3 11261515 11261520 H4TF1 TRANSFAC yes 406457
chr3 11261515 11261520 H4TF1 TRANSFAC yes 70936836
chr3 11261528 11261539 ESRRB JASPAR yes 406458
chr3 11261528 11261539 ESRRB JASPAR yes 70936837
chr3 11261530 11261540 RORA JASPAR yes 406459
chr3 11261530 11261540 RORA JASPAR yes 70936838
chr3 11261546 11261561 LEF1 JASPAR yes 406460
chr3 11261546 11261561 LEF1 JASPAR yes 70936839
chr3 11261584 11261596 FOXI1 JASPAR yes 406461
chr3 11261584 11261596 FOXI1 JASPAR yes 70936840
chr3 11261588 11261609 IRF1 JASPAR yes 406462
chr3 11261588 11261609 IRF1 JASPAR yes 70936841
chr3 11261592 11261613 IRF1 JASPAR yes 406463
chr3 11261592 11261613 IRF1 JASPAR yes 70936842
chr3 11261599 11261614 FOXA1 JASPAR yes 406464
chr3 11261599 11261614 FOXA1 JASPAR yes 70936843
chr3 11261600 11261612 FOXI1 JASPAR yes 406465
chr3 11261600 11261612 FOXI1 JASPAR yes 70936844
chr3 11261601 11261613 FOXC2 JASPAR yes 406466
chr3 11261601 11261613 FOXC2 JASPAR yes 70936845
chr3 11261601 11261615 FOXF2 JASPAR yes 406467
chr3 11261601 11261615 ONECUT3 JASPAR yes 406468
chr3 11261601 11261615 FOXF2 JASPAR yes 70936846
chr3 11261601 11261615 ONECUT3 JASPAR yes 70936847
chr3 11261602 11261613 FOXB1 JASPAR yes 406469
chr3 11261602 11261613 FOXC1 JASPAR yes 406470
chr3 11261602 11261613 FOXB1 JASPAR yes 70936848
chr3 11261602 11261613 FOXC1 JASPAR yes 70936849
chr3 11261603 11261607 YY1 TRANSFAC yes 406471
chr3 11261603 11261607 YY1 TRANSFAC yes 70936850
chr3 11261605 11261617 POU2F1 JASPAR yes 406472
chr3 11261605 11261617 POU2F1 JASPAR yes 70936851
chr3 11261605 11261618 POU3F3 JASPAR yes 406473
chr3 11261605 11261618 POU3F3 JASPAR yes 70936852
chr3 11261606 11261618 POU3F1 JASPAR yes 406474
chr3 11261606 11261618 POU3F2 JASPAR yes 406475
chr3 11261606 11261618 POU3F1 JASPAR yes 70936853
chr3 11261606 11261618 POU3F2 JASPAR yes 70936854
chr3 11261607 11261611 YY1 TRANSFAC yes 406476
chr3 11261607 11261611 YY1 TRANSFAC yes 70936855
chr3 11261610 11261620 GSX2 JASPAR yes 406477
chr3 11261610 11261620 GSX2 JASPAR yes 70936856
chr3 11261611 11261619 BARX1 JASPAR yes 406478
chr3 11261611 11261619 BARX1 JASPAR yes 70936857
chr3 11261613 11261624 RUNX1 JASPAR yes 406479
chr3 11261613 11261624 RUNX1 JASPAR yes 70936858
chr3 11261621 11261624 MYB TRANSFAC yes 406480
chr3 11261621 11261624 MYB TRANSFAC yes 70936859
chr3 11261624 11261644 RREB1 JASPAR yes 406481
chr3 11261624 11261644 RREB1 JASPAR yes 70936860
chr3 11261630 11261651 IRF1 JASPAR yes 406482
chr3 11261630 11261651 IRF1 JASPAR yes 70936861
chr3 11261631 11261646 FOXP1 JASPAR yes 406483
chr3 11261631 11261646 FOXP1 JASPAR yes 70936862
chr3 11261631 11261652 IRF1 JASPAR yes 406484
chr3 11261631 11261652 IRF1 JASPAR yes 70936863
chr3 11261632 11261653 IRF1 JASPAR yes 406485
chr3 11261632 11261653 IRF1 JASPAR yes 70936864
chr3 11261633 11261648 FOXP1 JASPAR yes 406486
chr3 11261633 11261648 FOXP1 JASPAR yes 70936865
chr3 11261633 11261654 IRF1 JASPAR yes 406487
chr3 11261633 11261654 IRF1 JASPAR yes 70936866
chr3 11261634 11261655 IRF1 JASPAR yes 406488
chr3 11261634 11261655 IRF1 JASPAR yes 70936867
chr3 11261635 11261650 FOXP1 JASPAR yes 406489
chr3 11261635 11261650 FOXP1 JASPAR yes 70936868
chr3 11261635 11261656 IRF1 JASPAR yes 406490
chr3 11261635 11261656 IRF1 JASPAR yes 70936869
chr3 11261636 11261651 FOXP1 JASPAR yes 406491
chr3 11261636 11261651 FOXP1 JASPAR yes 70936870
chr3 11261636 11261657 IRF1 JASPAR yes 406492
chr3 11261636 11261657 IRF1 JASPAR yes 70936871
chr3 11261637 11261652 FOXP1 JASPAR yes 406493
chr3 11261637 11261652 FOXP1 JASPAR yes 70936872
chr3 11261637 11261658 IRF1 JASPAR yes 406494
chr3 11261637 11261658 IRF1 JASPAR yes 70936873
chr3 11261638 11261653 FOXP1 JASPAR yes 406495
chr3 11261638 11261653 FOXP1 JASPAR yes 70936874
chr3 11261639 11261654 FOXP1 JASPAR yes 406496
chr3 11261639 11261654 FOXP1 JASPAR yes 70936875
chr3 11261640 11261655 FOXP1 JASPAR yes 406497
chr3 11261640 11261655 FOXP1 JASPAR yes 70936876
chr3 11261641 11261656 FOXP1 JASPAR yes 406498
chr3 11261641 11261656 FOXP1 JASPAR yes 70936877
chr3 11261642 11261657 FOXP1 JASPAR yes 406499
chr3 11261642 11261657 FOXP1 JASPAR yes 70936878
chr3 11261643 11261658 FOXP1 JASPAR yes 406500
chr3 11261643 11261658 FOXP1 JASPAR yes 70936879
SNP sites on vista39947[chr3:11261398-11261658]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 11261506 rs189467942 T C
BCL6B
6546873
chr3 11261631 rs536061017 G A
FOXP1 IRF1 RREB1
6546874
chr3 11261636 rs560719859 GTTT G
FOXP1 IRF1 RREB1
6546875
chr3 11261644 rs548048207 T A,G
FOXP1 IRF1 RREB1
6546876
Genes possibly regulated by vista39947[chr3:11261398-11261658]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 11178779 11305243 + HRH1 ENSG00000196639.6 11178779 0.75 1.0 3410 17381
chr3 11313995 11599139 + ATG7 ENSG00000197548.8 11313995 0.66 1.0 3411 47663
Expression level of Genes
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miRNAs possibly regulated by vista39947[chr3:11261398-11261658]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results