EnhancerDB
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  3. vista39950[chr3:11316376-11316801]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39950[chr3:11316376-11316801]
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Tissue distribution of vista39950
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Transcription factor that possibly regulate vista39950[chr3:11316376-11316801]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 11316376 11316390 RORA JASPAR yes 70937101
chr3 11316377 11316389 GRHL1 JASPAR yes 70937102
chr3 11316378 11316388 TFCP2 JASPAR yes 70937103
chr3 11316388 11316399 ESRRA JASPAR yes 70937104
chr3 11316397 11316401 LFA1 TRANSFAC yes 70937105
chr3 11316413 11316427 PAX6 JASPAR yes 70937106
chr3 11316415 11316430 STAT2 JASPAR yes 70937107
chr3 11316416 11316430 STAT1 JASPAR yes 70937108
chr3 11316417 11316431 IRF7 JASPAR yes 70937109
chr3 11316421 11316436 STAT2 JASPAR yes 70937110
chr3 11316424 11316437 JUN JASPAR yes 70937111
chr3 11316438 11316452 SPIC JASPAR yes 70937112
chr3 11316441 11316462 IRF1 JASPAR yes 70937113
chr3 11316445 11316459 STAT1 JASPAR yes 70937114
chr3 11316445 11316460 STAT2 JASPAR yes 70937115
chr3 11316471 11316482 FOS JASPAR yes 70937116
chr3 11316499 11316513 ONECUT3 JASPAR yes 70937117
chr3 11316504 11316515 FOXA1 JASPAR yes 70937118
chr3 11316504 11316515 FOXH1 JASPAR yes 70937119
chr3 11316506 11316517 FOXP2 JASPAR yes 70937120
chr3 11316517 11316527 EMX1 JASPAR yes 70937121
chr3 11316517 11316527 HOXB3 JASPAR yes 70937122
chr3 11316517 11316527 MEOX2 JASPAR yes 70937123
chr3 11316517 11316528 HOXC11 JASPAR yes 70937124
chr3 11316517 11316528 HOXD12 JASPAR yes 70937125
chr3 11316518 11316526 NKX6-1 JASPAR yes 70937126
chr3 11316518 11316528 HOXC10 JASPAR yes 70937127
chr3 11316518 11316528 HOXD11 JASPAR yes 70937128
chr3 11316518 11316534 POU4F3 JASPAR yes 70937129
chr3 11316520 11316524 YY1 TRANSFAC yes 70937130
chr3 11316560 11316575 NR2C2 JASPAR yes 70937131
chr3 11316561 11316568 SP1 TRANSFAC yes 70937132
chr3 11316561 11316571 SP1 JASPAR yes 70937133
chr3 11316561 11316582 ZNF263 JASPAR yes 70937134
chr3 11316562 11316570 SP1 TRANSFAC yes 70937135
chr3 11316563 11316568 SP1 TRANSFAC yes 70937136
chr3 11316564 11316569 SP1 TRANSFAC yes 70937137
chr3 11316564 11316570 SP1 TRANSFAC yes 70937138
chr3 11316569 11316586 RXRA JASPAR yes 70937139
chr3 11316582 11316598 SOX8 JASPAR yes 70937140
chr3 11316686 11316691 MYC TRANSFAC yes 70937141
chr3 11316713 11316721 MEIS3 JASPAR yes 70937142
chr3 11316719 11316740 ZNF263 JASPAR yes 70937143
chr3 11316749 11316770 ZNF263 JASPAR yes 70937144
chr3 11316750 11316771 ZNF263 JASPAR yes 70937145
chr3 11316753 11316774 ZNF263 JASPAR yes 70937146
chr3 11316755 11316776 ZNF263 JASPAR yes 70937147
chr3 11316758 11316779 ZNF263 JASPAR yes 70937148
chr3 11316764 11316774 SP1 JASPAR yes 70937149
chr3 11316767 11316788 ZNF263 JASPAR yes 70937150
chr3 11316790 11316800 TEAD1 JASPAR yes 70937151
chr3 11316790 11316800 TEAD4 JASPAR yes 70937152
SNP sites on vista39950[chr3:11316376-11316801]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 11316380 rs75885101 A C
GRHL1 RORA TFCP2
6547244
chr3 11316567 rs188265912 C T
NR2C2 SP1 ZNF263
6547245
chr3 11316790 rs183678663 G A,C
TEAD1 TEAD4
6547246
Genes possibly regulated by vista39950[chr3:11316376-11316801]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 11313995 11599139 + ATG7 ENSG00000197548.8 11313995 0.66 1.0 3411 97619
Expression level of Genes
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miRNAs possibly regulated by vista39950[chr3:11316376-11316801]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results