EnhancerDB
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  3. vista39953[chr3:11332891-11333370]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39953[chr3:11332891-11333370]
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Tissue distribution of vista39953
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Transcription factor that possibly regulate vista39953[chr3:11332891-11333370]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 11332925 11332929 NFE TRANSFAC yes 410818
chr3 11332925 11332929 NFE TRANSFAC yes 70937239
chr3 11332938 11332949 FOXH1 JASPAR yes 410819
chr3 11332938 11332949 FOXH1 JASPAR yes 70937240
chr3 11332942 11332947 H4TF1 TRANSFAC yes 410820
chr3 11332942 11332947 H4TF1 TRANSFAC yes 70937241
chr3 11332943 11332951 FEV JASPAR yes 410821
chr3 11332943 11332951 FEV JASPAR yes 70937242
chr3 11332945 11332950 ETS2 TRANSFAC yes 410822
chr3 11332945 11332950 ETS2 TRANSFAC yes 70937243
chr3 11332982 11332988 TCF4 TRANSFAC yes 410823
chr3 11332982 11332988 TCF4 TRANSFAC yes 70937244
chr3 11332982 11332997 FOXP1 JASPAR yes 410824
chr3 11332982 11332997 FOXP1 JASPAR yes 70937245
chr3 11333015 11333028 HNF1B JASPAR yes 410825
chr3 11333015 11333028 HNF1B JASPAR yes 70937246
chr3 11333015 11333029 POU4F1 JASPAR yes 410826
chr3 11333015 11333029 POU4F1 JASPAR yes 70937247
chr3 11333015 11333031 POU4F2 JASPAR yes 410827
chr3 11333015 11333031 POU4F3 JASPAR yes 410828
chr3 11333015 11333031 POU4F2 JASPAR yes 70937248
chr3 11333015 11333031 POU4F3 JASPAR yes 70937249
chr3 11333019 11333027 DLX6 JASPAR yes 410829
chr3 11333019 11333027 MSX2 JASPAR yes 410830
chr3 11333019 11333027 DLX6 JASPAR yes 70937250
chr3 11333019 11333027 MSX2 JASPAR yes 70937251
chr3 11333019 11333033 ONECUT3 JASPAR yes 410831
chr3 11333019 11333033 ONECUT3 JASPAR yes 70937252
chr3 11333020 11333030 PAX3 JASPAR yes 410832
chr3 11333020 11333030 PAX7 JASPAR yes 410833
chr3 11333020 11333030 PAX3 JASPAR yes 70937253
chr3 11333020 11333030 PAX7 JASPAR yes 70937254
chr3 11333026 11333039 HNF1B JASPAR yes 410834
chr3 11333026 11333039 HNF1B JASPAR yes 70937255
chr3 11333028 11333032 YY1 TRANSFAC yes 410835
chr3 11333028 11333032 YY1 TRANSFAC yes 70937256
chr3 11333039 11333052 SMAD2 JASPAR yes 410836
chr3 11333039 11333052 SMAD2 JASPAR yes 70937257
chr3 11333054 11333058 LFA1 TRANSFAC yes 410837
chr3 11333054 11333058 LFA1 TRANSFAC yes 70937258
chr3 11333061 11333076 HSF1 JASPAR yes 410838
chr3 11333061 11333076 HSF1 JASPAR yes 70937259
chr3 11333062 11333075 HSF1 JASPAR yes 410839
chr3 11333062 11333075 HSF4 JASPAR yes 410840
chr3 11333062 11333075 HSF1 JASPAR yes 70937260
chr3 11333062 11333075 HSF4 JASPAR yes 70937261
chr3 11333066 11333077 STAT3 JASPAR yes 410841
chr3 11333066 11333077 STAT3 JASPAR yes 70937262
chr3 11333085 11333090 ETS2 TRANSFAC yes 410842
chr3 11333085 11333090 ETS2 TRANSFAC yes 70937263
chr3 11333121 11333135 TCF7L2 JASPAR yes 410843
chr3 11333121 11333135 TCF7L2 JASPAR yes 70937264
chr3 11333163 11333174 ELK4 JASPAR yes 410844
chr3 11333163 11333174 FLI1 JASPAR yes 410845
chr3 11333163 11333174 ELK4 JASPAR yes 70937265
chr3 11333163 11333174 FLI1 JASPAR yes 70937266
chr3 11333164 11333174 ELK1 JASPAR yes 410846
chr3 11333164 11333174 ELK3 JASPAR yes 410847
chr3 11333164 11333174 ERF JASPAR yes 410848
chr3 11333164 11333174 ERG JASPAR yes 410849
chr3 11333164 11333174 ETS1 JASPAR yes 410850
chr3 11333164 11333174 ETV1 JASPAR yes 410851
chr3 11333164 11333174 ETV3 JASPAR yes 410852
chr3 11333164 11333174 ETV4 JASPAR yes 410853
chr3 11333164 11333174 ETV6 JASPAR yes 410854
chr3 11333164 11333174 FEV JASPAR yes 410855
chr3 11333164 11333174 FLI1 JASPAR yes 410856
chr3 11333164 11333174 GABPA JASPAR yes 410857
chr3 11333164 11333174 ELK1 JASPAR yes 70937267
chr3 11333164 11333174 ELK3 JASPAR yes 70937268
chr3 11333164 11333174 ERF JASPAR yes 70937269
chr3 11333164 11333174 ERG JASPAR yes 70937270
chr3 11333164 11333174 ETS1 JASPAR yes 70937271
chr3 11333164 11333174 ETV1 JASPAR yes 70937272
chr3 11333164 11333174 ETV3 JASPAR yes 70937273
chr3 11333164 11333174 ETV4 JASPAR yes 70937274
chr3 11333164 11333174 ETV6 JASPAR yes 70937275
chr3 11333164 11333174 FEV JASPAR yes 70937276
chr3 11333164 11333174 FLI1 JASPAR yes 70937277
chr3 11333164 11333174 GABPA JASPAR yes 70937278
chr3 11333164 11333175 ETV2 JASPAR yes 410858
chr3 11333164 11333175 ETV2 JASPAR yes 70937279
chr3 11333164 11333176 ELF1 JASPAR yes 410859
chr3 11333164 11333176 ELF4 JASPAR yes 410860
chr3 11333164 11333176 ELF1 JASPAR yes 70937280
chr3 11333164 11333176 ELF4 JASPAR yes 70937281
chr3 11333164 11333177 ELF1 JASPAR yes 410861
chr3 11333164 11333177 ELF1 JASPAR yes 70937282
chr3 11333165 11333172 SPI1 JASPAR yes 410862
chr3 11333165 11333172 SPI1 JASPAR yes 70937283
chr3 11333165 11333173 EHF JASPAR yes 410863
chr3 11333165 11333173 FEV JASPAR yes 410864
chr3 11333165 11333173 EHF JASPAR yes 70937284
chr3 11333165 11333173 FEV JASPAR yes 70937285
chr3 11333167 11333179 HNF1B JASPAR yes 410865
chr3 11333167 11333179 HNF1B JASPAR yes 70937286
chr3 11333182 11333186 LFA1 TRANSFAC yes 410866
chr3 11333182 11333186 LFA1 TRANSFAC yes 70937287
chr3 11333189 11333196 NKX3-1 JASPAR yes 410867
chr3 11333189 11333196 NKX3-1 JASPAR yes 70937288
chr3 11333201 11333222 IRF1 JASPAR yes 410868
chr3 11333201 11333222 IRF1 JASPAR yes 70937289
chr3 11333247 11333266 RFX2 JASPAR yes 410869
chr3 11333247 11333266 RFX2 JASPAR yes 70937290
chr3 11333251 11333267 RFX2 JASPAR yes 410870
chr3 11333251 11333267 RFX3 JASPAR yes 410871
chr3 11333251 11333267 RFX4 JASPAR yes 410872
chr3 11333251 11333267 RFX5 JASPAR yes 410873
chr3 11333251 11333267 RFX2 JASPAR yes 70937291
chr3 11333251 11333267 RFX3 JASPAR yes 70937292
chr3 11333251 11333267 RFX4 JASPAR yes 70937293
chr3 11333251 11333267 RFX5 JASPAR yes 70937294
chr3 11333265 11333268 MYB TRANSFAC yes 410874
chr3 11333265 11333268 MYB TRANSFAC yes 70937295
chr3 11333272 11333288 SOX8 JASPAR yes 410875
chr3 11333272 11333288 SOX8 JASPAR yes 70937296
chr3 11333293 11333308 AR JASPAR yes 410876
chr3 11333293 11333308 AR JASPAR yes 70937297
chr3 11333307 11333311 YY1 TRANSFAC yes 410877
chr3 11333307 11333311 YY1 TRANSFAC yes 70937298
chr3 11333335 11333339 YY1 TRANSFAC yes 410878
chr3 11333335 11333339 YY1 TRANSFAC yes 70937299
chr3 11333349 11333360 FOXB1 JASPAR yes 410879
chr3 11333349 11333360 FOXB1 JASPAR yes 70937300
chr3 11333349 11333364 MEF2A JASPAR yes 410880
chr3 11333349 11333364 MEF2A JASPAR yes 70937301
chr3 11333350 11333354 YY1 TRANSFAC yes 410881
chr3 11333350 11333354 YY1 TRANSFAC yes 70937302
chr3 11333350 11333359 POU5F1B JASPAR yes 410882
chr3 11333350 11333359 POU5F1B JASPAR yes 70937303
chr3 11333351 11333360 POU5F1B JASPAR yes 410883
chr3 11333351 11333360 POU5F1B JASPAR yes 70937304
chr3 11333351 11333361 MEF2A JASPAR yes 410884
chr3 11333351 11333361 MEF2A JASPAR yes 70937305
chr3 11333365 11333368 MYB TRANSFAC yes 410885
chr3 11333365 11333368 MYB TRANSFAC yes 70937306
SNP sites on vista39953[chr3:11332891-11333370]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 11332986 rs542478365 T G
FOXP1 TCF4
6547366
chr3 11333082 rs79615541 T C no 6547367
chr3 11333120 rs143602986 A G no 6547368
chr3 11333160 rs191379286 T C no 6547369
chr3 11333291 rs1499119 G T no 6547370
Genes possibly regulated by vista39953[chr3:11332891-11333370]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 11313995 11599139 + ATG7 ENSG00000197548.8 11313995 0.66 1.0 3411 81104
Expression level of Genes
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miRNAs possibly regulated by vista39953[chr3:11332891-11333370]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results